Xiphophorus hellerii (green swordtail): 116722913
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Entry
116722913 CDS
T07363
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116722913
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116722913
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xhe00535
]
116722913
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116722913
Peptidases and inhibitors [BR:
xhe01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
116722913
Proteoglycans [BR:
xhe00535
]
Cell surface proteoglycans
Others
116722913
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Others
116722913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
Beta-APP
APP_amyloid
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
116722913
NCBI-ProteinID:
XP_032423215
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Position
7:13598683..13620286
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AA seq
752 aa
AA seq
DB search
MGEHTAFLLLLVATLTLSSEVPMDDSVGLLTEPQVAMFCGKLNMHINVQTGKWESDPSGT
KSCIGTKEGILQYCQEVYPDLQITNVVEANQPISIPNWCKKGRKQCRSHTHIVVPYRCLV
GEFVSDALLVPDKCKFLHQEQMNKCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDRF
RGVEFVCCPAEEERKSDSAEQNEEESDVWWGAAENEYSDNSMTRPVDTQPAAAEDDEDDD
EEEEAFERDEDGDGDEDDEEDDDDDVIDEQDSDERSASVAMTTTTTTTTESVEEVVRAVC
WAPADSGSCHAMLERWYFVPKQGRCAPFLFGGCGGNRNNFNSEEYCLTVCSSSLPTIAPS
PPDAVDQYLESPGDDNEHTDFRKAKESLEAKHREKMSQVMREWEEAERQVKNLPRSDKKA
VIQHFQEKVEALEQEAAEERQQLVETHMARVEALLNSRRRLSLENYLSALQANPPRSRQV
LSLLKKYVRAEQKDRQHTLKHYEHVRTVDPKKAAQIRPQVLTHLRVIDERMNQSLGLLYK
VPSVASEIQKQVAIIVQRVQSELSQQVSSLQSDGRVDGRVSYGNDALMPDQAYSSAPMEP
GLDGLGFIHPESFNQPNTENHVEPVDARPNPDRGLPTRPVSALKPEEMPEVRMDTEERQS
AGYEVYHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEV
DAAVTPEERHLAKMQQNGYENPTYKFFEQMQN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgggggagcacacggcgtttctgctcttactggtggcgaccttgacgctttcatctgag
gtgcccatggacgactctgtgggtttgctaactgagcctcaggtggccatgttctgtggg
aagttgaacatgcacatcaatgtacagactgggaaatgggagtctgacccatctggcacc
aaaagctgcattggcaccaaggagggcatcctgcagtactgccaagaggtgtacccagac
ctacagatcacaaatgttgtcgaggccaaccaacccatcagcattccaaactggtgcaag
aagggtcgcaagcagtgccggagtcacacacacatcgtggtgccgtaccgctgcctggtt
ggggagtttgtcagcgacgccctgctggttcccgacaagtgcaagttcctgcaccaggag
cagatgaacaagtgtgagagtcacctgcactggcacactgtagccaaggagtcttgtgga
gaccgctcaatgaatctccatgactacgggatgctgttgccgtgcggcatcgatcgtttc
cgaggtgtggagtttgtgtgctgcccggcggaggaagagcgcaagtcggacagcgcagaa
caaaacgaggaggagtctgacgtctggtggggcgcagctgagaacgaatattctgacaac
agcatgacgcgcccggtggacacgcaaccggctgccgcagaggacgacgaggacgacgac
gaggaagaagaagccttcgaaagggacgaggacggagacggcgatgaagatgacgaggaa
gacgacgacgacgacgtcatcgatgagcaggatagcgacgagcgcagcgccagcgtcgcc
atgacgaccaccaccacgaccaccactgaatctgttgaggaagttgtgagagcggtgtgc
tgggcccccgctgattcaggctcgtgtcacgccatgctggaacgttggtacttcgtcccc
aaacagggccgctgtgctcccttccttttcgggggctgcgggggcaacaggaataacttt
aattcggaggagtactgcctgactgtgtgtagcagctcgttgcccaccatagcgcccagt
cctccggatgcagtggatcagtaccttgaatcgccaggggatgacaatgagcacacggat
ttccgaaaagccaaagaaagcctggaagccaaacaccgtgaaaaaatgtctcaggtgatg
agggagtgggaggaggcggagagacaagtgaagaatcttcctcgttcggataagaaagct
gtaattcagcacttccaggagaaggtggaagccctggagcaggaggctgcagaggagcgg
cagcagctggtggagacgcacatggcccgggtggaggccctgctcaacagccgcaggcgc
ctttctctggaaaattatctcagcgcccttcaggctaatcctccacggtcccgacaggtg
ctgagcctgctgaagaagtacgtccgtgcagaacagaaggacaggcagcacacactgaaa
cactacgaacacgtccgcaccgtcgacccaaagaaggctgctcagatccgccctcaggtt
ctgactcacctccgtgtgattgatgagaggatgaatcagtcactaggtctgctctacaag
gtgcccagtgtggctagtgagatccaaaaacaagttgcgattatagtgcagagagtccag
tctgagctgtctcagcaagtctcttccctgcagagcgacgggcgggtggacggcagggtg
agctatggcaacgacgcgctgatgccagatcaggcctacagctctgctccgatggaaccc
ggcctggacggactgggcttcattcacccggagagcttcaaccagccaaacactgagaac
catgttgagcctgtcgatgctcgtcccaatccagacagaggactcccgacacgacctgtt
tctgccttgaagccagaagagatgccagaggtgcggatggacaccgaagagaggcagagc
gctggatatgaggtttaccatcaaaaattggtgttttttgctgaggacgtggggtccaac
aagggcgccatcatcgggcttatggttggaggggttgtcatagcgacagtcattgtcatt
actttggtgatgctgagaaagaagcaatacacctccatccatcatggtgtaatcgaggtg
gatgcagcagtgactcccgaggagcgtcatctggccaagatgcagcagaacggctacgag
aacccgacctacaaattcttcgagcagatgcagaactga
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