Xiphophorus hellerii (green swordtail): 116722917
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Entry
116722917 CDS
T07363
Symbol
gabpa
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116722917 (gabpa)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
116722917 (gabpa)
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
116722917
NCBI-ProteinID:
XP_032423223
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Position
7:complement(13620364..13628743)
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AA seq
439 aa
AA seq
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MSKSETEELIEIEIDEREKQACLEEGIEEQTITASDLIQQDIDINEPIGNLKKLLEPRVQ
FCLDGFDICLQDIQLHPDHSLFDQGVKTDGTVQLSLQIVAKPGEEKLNILEIVKPVETVE
VVIDPDAAGEDGALVEEGQLIAVERSSLSDETSEQVTRWAAALEGYRKEQVRLGIPYDPL
LWTADQVIHWAVWVMKEFNIDEMEIGSIHIPGRELCSFNQEEFLQKVPNGEILWSHLELL
RKYVLASQDQSGGDATVTIDQPVQIIPAQVSTPTAIKVLKHNRGPRAPRISGEERSSPGN
RTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMNYE
KLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNNLVTECEQKKLARIQMH
GLGQPITTVTLATTLDKDS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagcgagacagaagagttgatagagatcgagattgatgaacgggagaaacag
gcatgcctggaggaaggcattgaggagcagaccatcacagcttctgatttgattcaacaa
gatattgacatcaatgagcccattggcaatctgaagaagcttttggagcctcgcgtccaa
ttctgtctggatggatttgacatctgcttacaagacattcagcttcacccggatcacagc
ctcttcgatcagggggtaaagacggacggcacagtgcagctcagcctgcagattgttgcc
aaaccaggggaggagaagctgaacatcctggaaatagtgaagccggtagaaacagtagaa
gttgtgattgacccggatgcggctggagaagatggggcgttggtggaggagggacagctc
atcgcagtagagcggtcctccctgtccgatgagacgtcggagcaggtgacacgctgggct
gcagcgttggaaggttaccgcaaggagcaggttcggcttggaataccgtatgatcctttg
ctctggacagctgaccaggtgatccactgggctgtgtgggtcatgaaggaattcaacatc
gatgagatggagatcggcagcatccacatccctggccgagagctctgcagcttcaaccaa
gaggagttccttcagaaagtgccaaacggagagatactgtggagccacctggagctgctg
cgcaaatatgtgttggccagtcaggaccagtcaggcggggacgccactgtcactatagat
caacctgttcagataattccagctcaagtgagcacgcccactgctataaaagtactgaaa
cataaccggggccccagagcgcccagaatttcaggagaggagcgcagttcccccggcaac
cgcacaggtaacaacggtcagatccagctgtggcagttcctgctggagcttctgacggac
aaagacgcaagagactgcatttcctgggtcggagaggagggagagttcaagctgaaccag
ccggagcttgtggcgcagaaatggggccagcgcaaaaacaagccgacgatgaactacgag
aagctcagcagagccctgaggtactactacgacggggacatgatcagcaaagtgcagggc
aagcgcttcgtctacaagtttgtgtgcgacttgaggactctgattggctatagcgccgcc
gagctcaacaacctggtgacagagtgcgagcagaagaaactggctcgcattcagatgcac
ggcctcggacagcccatcaccacagtcacgctggccaccacactagacaaggacagctga
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