Xiphophorus hellerii (green swordtail): 116722928
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Entry
116722928 CDS
T07363
Name
(RefSeq) CXXC-type zinc finger protein 1-like isoform X1
KO
K14960
COMPASS component SPP1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116722928
03036 Chromosome and associated proteins [BR:
xhe03036
]
116722928
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
116722928
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
116722928
COMPASS/SET1 complex (yeast)
116722928
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Rhamnogal_lyase
Motif
Other DBs
NCBI-GeneID:
116722928
NCBI-ProteinID:
XP_032423250
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Position
1:32929807..32935913
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AA seq
598 aa
AA seq
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MSEEAAGAEPGPEEEEQGGGEVAMETPSAPVYCVCRKPDINCFMIGCDSCTEWFHGQCVG
VSEKAAKAIRVWFCPTCRDRDSSLEIKYRQKKSKEAEPERDDRTDGERSSALQARIDRRR
GSQIKRSARMCGECDACLRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRV
RDEEMSRSGSRGRGLSAKGAGHLSEDDDEEDEDEEGFSESELELYQQYKAAGYRDLVWHS
EEEDDAQSDSLRKKAVKVKHVKRRDKKPEKKKSVSVPKEEAKPRRHKVKQRHRERVRHSE
RAGEGGAKEAGGALRQCLGPGCVEPARSGSKYCSEDCGMKLAANRIYEILPQRIQQWQQS
PCVAEEMGRRQLERIRKEQQAARLRLTLMEKRFHELETIIANAKQQQVQQDEEVAEGDGD
DTDLQIFCVSCSHPVNPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQS
KTYCKRLQVLCPEHSRDPKVPADEVCGCPLVKDVFEPTGEFCRVSKRKCNKHYCWEKLRR
AEVDLERVRVWYKLDELFEQERNLRTAMTNRAGLLALMLHQTIQHDPITTDLRSAKDR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggcagcaggagccgaaccgggtccggaggaggaggagcagggaggagga
gaggttgccatggaaacgcccagcgctccggtttactgcgtgtgtcggaaaccagatatc
aactgcttcatgataggctgtgacagctgcacggagtggttccacggtcagtgcgtcggc
gtgtcggaaaaagcagccaaagccatccgagtttggttctgcccgacctgcagagacaga
gactcgtctctggagatcaaataccgtcagaaaaagagcaaggaggcggagccagagagg
gacgacagaacggatggcgagcgaagctccgccctccaggccaggatcgaccggcggcgg
ggttctcagatcaagcgctcggcccggatgtgtggcgaatgcgacgcctgcctgcggacg
gaggactgcgctcagtgcgacttctgcaaagacatgaagaagttcggtggtccgaacaag
atccggcagaaatgccgcctccggcagtgcgaggtccgagcacggaagatgcttcgagtt
cgagacgaggagatgagtcggagtggcagcagggggcggggcctgtccgcaaagggggcg
gggcatctttcagaagatgatgacgaggaggatgaggacgaggaaggtttcagtgagagc
gagctggagctgtaccagcagtacaaagcggctggatacagagacctggtgtggcacagc
gaggaggaagatgatgctcagtcagactctctgaggaagaaggcggtgaaggtgaaacac
gtgaagagacgagacaagaaaccggagaagaagaagtccgtttctgttcccaaagaggag
gcgaaacctcggcgccacaaggtgaagcagcgccacagggagcgcgtgcggcacagcgag
cgcgcaggagagggcggggctaaagaggcgggcggggctttgaggcagtgtctgggtccg
ggctgcgttgaaccggccagaagtggctccaagtactgctcagaggactgcggcatgaaa
ctggcagccaaccggatctatgagatcctcccccagaggatccagcagtggcagcagagt
ccctgcgtcgccgaggagatggggcggagacagctggagcgaatcaggaaggagcagcag
gctgccaggctccgcctcacgctgatggagaaacgtttccatgaactggaaaccatcatc
gccaacgccaagcagcagcaggtccaacaagacgaggaggttgctgagggagatggggac
gacacagacctgcagatcttctgtgtgtcctgcagccaccccgtcaaccccaaggtggcg
ctgcgacacatggagaggtgctatgctaagtacgagagccagacctcatttggctccatg
tatccgactcgcatcgaaggggccacccggctgttctgtgatgtctacaacccacagagc
aagacctactgcaagcggctgcaggttctgtgtccagaacattccagagatcccaaggtc
ccagcagatgaggtgtgtggatgtcctctggtcaaagacgtcttcgagcccactggggag
ttctgccgggtctccaagaggaagtgcaacaagcactactgctgggagaagctgcggcgg
gccgaggtcgacctggagcgagtccgagtgtggtacaagctggatgaactgtttgagcag
gagaggaacctgaggacggccatgaccaaccgggctgggctgctggcgctgatgctgcac
cagaccatccagcatgacccaatcaccaccgacctgcgctctgccaaggacaggtag
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