Xiphophorus hellerii (green swordtail): 116722965
Help
Entry
116722965 CDS
T07363
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04145
Phagosome
xhe04814
Motor proteins
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116722965
09142 Cell motility
04814 Motor proteins
116722965
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116722965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116722965
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116722965
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
116722965
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
116722965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
Dynein_IC2
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IP5PC_F
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR11_1st
PEHE
Motif
Other DBs
NCBI-GeneID:
116722965
NCBI-ProteinID:
XP_032423294
LinkDB
All DBs
Position
7:16677749..16702670
Genome browser
AA seq
637 aa
AA seq
DB search
MSDKSELKAELERKKLRLAQIREEKRRKEEERKKADQQQKEVSQQQDDSDLEKKRREADA
LLQSMGITPDAAVAPPPMTPAPKSAETPSETGSQDSDGAVGPRTLHWDSDPSTLQLHSDS
ELGYWTLSSLLSWRVTPKLGMAKVTQVDFPPRETVSYTKETQTPAPAQAKEEEEEEEEIA
PAQPVVEDQTEKLHQKEVEEEAPPHELTEEEKLQILHSEEFANFFDQSTRIIERALSEHV
DILFDYSGRDLEDKEGEIQAGAKLSLNRQFMDERWSKHRVVTCLDWSPLYPELLVASYNN
NEEAPHEPDGVALVWNMKYKKATPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWD
NRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDS
MELVFKQSKAVAVTSMSFPFGDVNNFVVGSEDGSIYMSCRHGSKAGISEMFEGHHGPITG
IHCHTAAGPLDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFA
CVDGIGHLDLWNLNNDTEVPTASVVVEGSPALNRVRWAHTGREIAVGDSDGRVLVYEVKE
QIAVPRNDEWTRFVCTLAEINENRDDAEELAAQRLAA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaagcggaactcgaaaggaagaagctacgtttggcccaa
atccgggaggagaaaagaaggaaggaggaggagcgaaagaaggcggaccaacagcagaaa
gaagtttcacaacagcaggatgactccgacctggagaaaaaaagacgagaagctgacgct
cttctgcaaagtatggggataacaccagatgctgcagttgcccctcctcccatgactcct
gctcccaaatcagcggaaactcctagtgaaaccggcagccaggactctgatggagccgtg
ggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgattct
gagctggggtactggacactctcttctctcctttcctggcgtgtgactccaaaactggga
atggccaaagtcacacaggtggacttcccaccacgtgaaacagtgtcctacaccaaggag
actcagacaccagcccccgcccaggctaaagaagaggaagaagaggaggaagaaattgct
ccagctcaaccagtagtcgaggatcaaactgagaaactgcaccagaaagaagtagaagaa
gaagccccgccgcatgagctgactgaggaggaaaaactccagatcctccactccgaggag
tttgctaacttcttcgaccagagcacccgcattatcgagcgagcgctctccgagcacgtg
gacatcttatttgactacagcggtcgtgacctggaggacaaggaaggggaaattcaggcg
ggagcgaagctttcactgaacaggcagttcatggacgagcgctggtccaaacatcgggtc
gtcacctgtctggactggtctccactgtatcctgagctcctggtcgcctcctacaacaac
aacgaggaggctccacacgaaccagacggcgtggctttagtctggaacatgaagtacaag
aaagccacgccagaatacgtcttccactgtcagtcggccgtgatgtctgcggcatttgca
aagtttcacccaaacgtcgtggttggtgggacgtactctgggcagatcgttctgtgggac
aacaggagcaataagaggaccccagtgcagaggaccccgctctcagcagcagcacacacg
cacccggtgtattgtgtgaacgtagtcggcacacagaacgcccacaacctgattagcatc
tcaacggacggcaagatctgctcctggagtctggatatgctctcccagccgcaggacagc
atggagctcgtcttcaagcagtccaaagccgtcgccgtcacctccatgtccttccctttc
ggagacgtcaacaactttgtggtgggcagcgaggacggctccatctacatgtcgtgtcgt
catggaagcaaagcggggatcagcgagatgtttgagggccaccacggccccatcaccggg
atccactgccacacagctgcagggccgctggacttctcccacctgtttgtcacctcatcc
ttcgactggaccgtcaaactgtggagcaccaagaataacaagccgctctactcatttgaa
gacaattccgactacgtgtatgacgtcatgtggtctcccactcacccggctctgtttgca
tgcgtggacggcatcggccacctggacctgtggaacctgaacaatgacaccgaggtcccc
actgctagcgttgtggtggaggggagcccggccctcaacagggtcagatgggctcatacc
gggagagagatcgcagtgggagactccgatggacgcgttcttgtttatgaggttaaagag
caaattgcagttccgcgaaacgacgagtggacgcgcttcgtctgcacgctggcagagatc
aacgagaacagagacgacgcggaggagctggccgctcagcgtctggctgcgtga
DBGET
integrated database retrieval system
