Xiphophorus hellerii (green swordtail): 116722984
Help
Entry
116722984 CDS
T07363
Symbol
traf3ip1
Name
(RefSeq) TRAF3-interacting protein 1 isoform X1
KO
K19680
TRAF3-interacting protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116722984 (traf3ip1)
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
116722984 (traf3ip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIP-T3_C
MIP-T3
DUF4880
CorA
Motif
Other DBs
NCBI-GeneID:
116722984
NCBI-ProteinID:
XP_032423329
LinkDB
All DBs
Position
7:26412256..26435874
Genome browser
AA seq
611 aa
AA seq
DB search
MNAAVVKKTQDTLGKVIKKPPLTEKLLCRPPFRYLHDIFSEVIRTTGFMKGLYEENEMKS
DSVKDKDSKMAYLQKAIDVVMLVSGEPLAAKPARIVAGHEPEKTNELLQAIAKCCLNKLS
SDEAVKRVLAGEKVDLKTKGSTSRSQGKENRDGKERQPDKEEKKKIERSGSREHKDPNQG
KEQESRQRDKEDHHDHERTERHHRSEKDHQDKSREQERERDKGRVRERDRDRDKEKTRER
DSHRDRSQDKRRDKDREREGDRSNDWNEKNRSGERENDKARVSEKPQQKAAKTVPADLKP
VEEPTDVVENQLGNPARIPRPSSAKGQRQKPKVESADESDSEGDGDVQLVQRAIPQENGD
SEESSVPDKTVRRVARPSSARPAPPRVRRQESSADGTPAERLSSAKPAAPIILDGKRKSD
DEEDEDEQFLVMEAVTPHPDSPKTVREAAHELDADEKHGGLVKKILETKKDYELTPSSSK
SKEQNLVSETARKKDRELVMREIDRLRSSIQMVCRSSLPLGKIMDYIQEDVDAMQAELQS
WRRENKEHAQALLQEQRITDRAVEPLSAELVELDQLIKDQQDKICAVKSNILKNEEKIQK
MVTGINFSSRT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggcggtggtgaaaaagactcaggacacgctgggaaaagtgataaagaaaccc
ccgctgacggaaaaactgctttgcaggccgccgtttcggtaccttcacgacatcttcagc
gaggttatcaggaccactggttttatgaaaggcctgtatgaagaaaatgagatgaagtca
gatagtgtcaaggacaaggactctaaaatggcctatcttcagaaagcaatagatgttgtg
atgttggtgtctggtgaacctctggcagcaaagccagcacgaattgttgctggtcatgag
cctgagaaaaccaacgagttgcttcaggccatcgccaagtgctgcctcaacaagttgtcc
agtgatgaagcagtgaagcgagttcttgcaggagaaaaagtggacttaaagaccaaaggg
agcacctccagatctcagggcaaggaaaacagggatggaaaggaacggcagccggataag
gaagaaaagaaaaagatagagcgaagtggcagccgggagcataaggatccgaaccagggc
aaagagcaagaaagccggcagagagacaaagaagaccaccatgaccatgagcgcacagag
aggcatcaccgcagtgagaaggaccaccaagacaagagccgagagcaggaacgagagcga
gacaaaggacgggtcagggagagagatcgagacagagacaaggaaaagaccagggagagg
gattctcacagagacagaagccaagacaaacgaagagacaaagaccgagagagggaagga
gatcgaagcaatgactggaatgaaaaaaacagaagtggggaaagagaaaatgacaaggcc
agagtgtcagagaaacctcagcagaaagcagccaaaactgtgccagcagatctaaaacca
gttgaagagcccacagatgtagtagaaaaccagttaggtaatccagctaggataccccgg
ccctcgtctgccaaaggtcagaggcagaaacccaaagttgaaagcgcagatgagtctgac
agtgaaggagatggagacgttcagttagtccagagagccatccctcaggagaatggagac
tctgaagaatcctctgtgccagacaagactgttaggcgagttgctcggccgagcagtgcc
cgccctgcacctcctcgagtcaggagacaagagagcagcgctgacgggaccccagctgag
aggctgtcgagtgccaagcccgcagctcccattatattggacgggaagagaaagtcagac
gatgaggaggatgaagacgaacagttcctagtgatggaggccgtcaccccacatccagat
tctcctaaaacagtgagagaagctgcacatgaactcgatgctgatgaaaaacatggtgga
ctcgtgaaaaagatccttgaaacaaagaaggactacgagctgactccgtcctcatcaaag
tctaaagagcagaacttggtgtccgaaacagctcgtaaaaaagatcgggaactggtgatg
agggagatcgaccggcttcgctcctccatccagatggtgtgtcggagttccttaccgctt
ggaaagatcatggactacatccaggaggacgtggacgccatgcaggctgagctgcaaagc
tggcggcgggagaataaggaacacgcacaggccttgctacaagagcagaggataacagac
cgggccgtggagcctctcagcgcggagctggtcgagctggaccagctcatcaaggaccag
caggataagatttgtgctgtgaagtccaatatactgaagaatgaggagaagatccagaag
atggtaactgggatcaacttttcctccagaacctga
DBGET
integrated database retrieval system
