KEGG   Xiphophorus hellerii (green swordtail): 116723044
Entry
116723044         CDS       T07363                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xhe03032]
    116723044 (rif1)
DNA replication proteins [BR:xhe03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    116723044 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 116723044
NCBI-ProteinID: XP_032423463
LinkDB
Position
7:2613479..2640963
AA seq 2352 aa
MMATAGPPNTSSFLPLLETLEDGTAGQSEQTDAYLTIANRLSGEEGRQFLPAVEKNFSRL
GKVILTHTSSSNAELSQAALQALGFCVYHSQVVSGVSEIFAAQILSALCSLVTKSIDKNT
CTRALWVISKQCFPADVVGKNVPTLLAALETVWNREDIQSAVMEHEALNVIIRLLEQVPT
PMCDGAVRWAKLVVPLVVHSASKVRLRAAAALEMGIPLLLAKQMEVAAIIEPMMSTKLIP
ELQKLFKSKNETNVLKLWPLFVKLLGKLLHKGGPFINSLLHLEELGFRSSSPTIKKIAFI
AWKSLIDNFALNPDILCSSKRMKLLMQPLTSIHVRTEALLLTKVEVWWYLIVQLGPNLSS
NFDQVSVPLLQVTIGPDLPSVPNTPSRAAAQNGAVTPSTPKSGSGSFNTSASTPRMGLNS
SMHLPASFSSIQQLGLEMLLHYFLGPEVVAAAAKNKLVLSLEPLTHPLLSGAPSFMKHAA
VLISTMREAFINAGKDAPEPLLAVIWTSLVRFVSLTIESAGSKKERQGSECLTLMLQALQ
SVVSSEALPADRVLVLLEATVKGLPPRVLGSASYQVGKMDVLNGTPALFVILLLFNSSKL
PAYLEHDSRFFQCLQTLVSCGLSGPTSPLAFAEAVLGVMSSCAASLQNKELLWRMWSLLV
GPLTDTITQSNEVNQGDALEHNFSAMHSALMFPITHLLQQASQKSLLSSWSKLYRVFARC
AALVVTAEENICCEELCVKMAAAADREALRVPSTLSTVSSILQVMVECVDFSPYTPHFQQ
KLKSPHTPVNWTRKRSKALGNLSAFLSLLVQSLQAFLEAPEAAPDATPLAMLSIMSTLFA
NLILANAVTEALGALVQPLALFYKCAVGGCAEFSPQLQGKLEKLLCEVLGCLQSRSTLAY
DDELLALLSPLLCVVFPHKNKHLRSAVAQFWNATFANTVRLAYPEELRPVLSQVKQKTPI
ILPGFEVVGVSDELSETYSSESSELEPKLSGIPISSAGKRDSMLSRADLKDRSATKTAKP
VPTKLDFGSPKPPRRHVLEEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPAMYNNL
DASQDTTVFSQYTQSQDDSLDKVPTEQVDGVPPESPSETEEKPREDAEILSKETQDYSSP
KHDDNMEESIPDSADVFLEEPTKSTERTEDMDVELKDSASPNTSASSDLVSGTPQKPSSR
RQSFITLEKYGEGKPASPSSGSSFTGPLVKTSKSQDHSSEKNILSPEASQTSTAPNSQDP
TPSETVGPQCPGSESPRRPKESRTRSEPVRLIERMQSDSAEEEDVIPDTQTKDEDKESTS
YSEEINSSSQDEESETVLDDSQSSLTQTPSGEPRRSRRHRIRPQLPGEDPDTREAKYTHV
KRRRSGEDPKSESSNLAPSRPNTRSKQAAEENSSRIQLRSKSQGNANESSQSNSQVRHRK
KIKLNNLSEDLLGSPERKRRSTSGLDSSQTDIKSESLSSHESQKHRKRNEISKVSKEGAD
SEKPKEEFNHTVTESMVDLSQKDDPYPNTDSQTVVPLAQTEKSEEVKSEEQTEQGESQKE
KQDVVTSSPQCEDKSREQIDSDAVMFSPVEESKGETRNLLQNQEIIQDNAIETVIDNCSQ
EESQVTPSSDSQIRRRSRRSKATESEDKDESINSSGRLTRSQTSTPVNQPEAGVGGRTRR
SKLESSQSSTPESSRSLDSSGSGSSQGKGRLRSSQSSASSVETPESESSEVLVNAVRKKK
GRKPRASLKNPLPLETKEDILEDASQNLETQNSLEESLENQDPKESGSKTESNEEESESP
MITETLADLPLETEDSKKTESEEATQDTRSLDTTEQRDSNSEKDSLQEVEVLESSVFGDA
PAQDSCLPAEEKLQASETSKETAEKVSETEGVTEKQEESNSDQQDFPAPPPEEPSPEELQ
QSQMECAQVTEEEEPSATHQVSEASPKEDITLQDNEDDQPETSEDKLEKAPATETSGAAD
LDCTTAASSQAAAQDSPVKQKDLEAVTEPDVGQSPSNGLLKGTWSPSASPSNSILKKCQK
RQLEVETTSPLVKSRRVSFANPIQQQETADDIDRRSPALRTSSPRRSKGCNVPQQKHITT
PTKGTLVLSPRNIHSPSYRSSKKCLISEMTREPRAVPRDCIYPSLVGCSAPVEAVLSQIS
STMWSRGFGQLIRARNVKSVGDLCALTPSEIKTLPIRSPKISNVKKALKIYEQQRKGRAD
ELKSFDETERMTSEVEEAASPCNHDDEEKTSAETLATELLDEPLPADAAAEHQDGEQRPA
VPADPAAELPAAVEALACRATPLELSRCSPQQLLQMHEQLGGMMRGVAVELQARLCHASD
KHRTTPRSGQTH
NT seq 7059 nt   +upstreamnt  +downstreamnt
atgatggctactgcagggcctcccaacacctccagcttcctccctctgttggagactctg
gaggacggtacggccggacagtcggagcagacggacgcctacctgaccatcgccaatcgc
ctcagtggggaggaaggccgccagttcctcccagcagtagagaagaacttctcacgtttg
ggtaaagtcatactgacccacacaagcagttccaatgccgagctgagtcaggctgccctc
caggctttagggttctgtgtgtatcactcccaggttgtttccggagtctccgagatcttt
gcagctcagatactgtcggctctctgctccctggtgacaaagtccatcgacaagaacacc
tgcaccagagccttatgggtcatctccaaacagtgctttcctgcagacgtagtcggcaaa
aacgtgccgactctgctggctgctttggagactgtgtggaacagagaggacatccagtct
gcagtgatggagcatgaggccctgaacgtgatcatcaggctgctggagcaggtgccgacc
ccgatgtgtgacggcgcggtgcgctgggcgaagctggtcgtccccctggtggtgcactcc
gcctccaaggtgcgtctgcgcgccgctgccgccttggagatgggcattcctctgctgctg
gccaaacagatggaggtggctgccatcatcgaaccaatgatgtccacaaaactgatccca
gagctgcagaagctcttcaagtccaagaatgaaacaaacgtcctgaagctctggccattg
tttgtgaagcttcttgggaagctgctgcataaaggcggtccgttcatcaactccctgctg
cacctggaggagctgggcttccgaagctcctcccccaccatcaagaagatcgccttcatc
gcctggaagagcctcatcgataactttgctctcaacccagacattctgtgcagctccaag
cgcatgaagctgctgatgcagccgctcacctccatccacgtccggacagaggcgctgctg
ctcaccaaggtggaggtgtggtggtacctcatcgtgcagctgggacccaatctgtcctcc
aacttcgatcaggtgtccgtgcctctactccaggtgaccattggacccgatttgccgtcc
gttccaaacactccgtctcgggccgctgctcagaacggagccgtgactcccagcacccca
aaatcaggcagcggcagcttcaacacttcggccagcacgccccggatgggcctgaactcc
agcatgcatcttcctgccagcttctcctccattcagcagctgggcctggagatgctgctg
cactacttcctggggccagaggtcgttgctgccgcagcaaagaacaaacttgtgttgagt
ctagaacctctgacccacccgctgctctctggtgctccgtccttcatgaagcatgcggcc
gtgctcatctccaccatgagggaggccttcataaacgccggcaaagacgctccagagccg
ctgctggccgtcatctggaccagcctggtccggtttgtcagcttgaccatagagtcagca
ggcagtaagaaggagcggcaaggcagtgagtgtctcaccctgatgctgcaggcgctgcag
agcgtggtctcctccgaggctctccctgcagacagagtcctggttctgttggaggccaca
gtgaagggtctgcctccaagagtgctgggctccgcctcctaccaagtggggaagatggac
gttctgaatggaaccccggctctgttcgtcatcctcttgctcttcaacagcagcaaactg
ccggcctacctggagcacgacagcagattcttccagtgcctgcagactctggtgtcgtgc
ggcctgtctggacccacgtctcctctggccttcgccgaggccgtgctgggcgtcatgagc
agctgtgcagcgtctctgcagaacaaggagctgctctggaggatgtggagtttactagtc
ggccctctgactgacaccatcacacagtctaatgaggtgaaccaaggtgacgctctggag
cataacttcagcgccatgcactctgccctgatgttccccatcactcacctcctccagcag
gcgtcccagaagtccctgctgtcctcctggtccaagctgtaccgcgtgtttgctcgctgc
gccgccctggtggtgacggctgaggagaacatctgctgcgaggagctctgtgtgaagatg
gctgccgctgcagacagggaggcgctgagggttccttccacactgagcaccgtctccagc
atcctgcaggtcatggtggagtgtgtggacttctctccctacacgcctcactttcagcag
aagctgaagtctcctcacactccggtgaactggacgcggaagcggagcaaagccctgggg
aacctgtctgccttcctgtccctgctggtccagagtctgcaggcgttcctggaggccccc
gaggcggcccccgacgccacgcccttggccatgctctccatcatgtccactctctttgcc
aacctcatcctggccaacgccgtcaccgaggcgctgggtgcactcgtccagcctctggct
ctcttctataagtgcgctgtgggcggctgcgctgaattctcccctcagctccagggaaag
ctggagaagcttctgtgtgaggtcctgggctgcctgcagtcccgctccactctggcctac
gatgacgaactgctggctctgctgtctcctctgctgtgtgtcgtgtttccgcacaagaac
aagcatctgcgctcagccgttgctcagttctggaacgccacctttgccaacacagtcaga
ctcgcgtatccagaggagctcaggccggtgctgagccaagtgaagcagaagactccgatc
attcttccaggctttgaggttgtcggcgtttctgatgagctcagtgagacctattcaagt
gaaagctccgagcttgagccaaagctcagtgggatccccatttcttctgctgggaagaga
gactccatgctcagcagagctgatctgaaggaccgcagcgccacaaagacggccaagccg
gttccgacgaagttggactttggttctcccaaacctccccgcaggcacgtcctggaggaa
gaggcttccatcgactttgtcttcattcctcctgagacaaaggagagggttctaaccgag
catcagaaggaggtgaaaagaaccaaaagggttgatattccggccatgtacaacaacctg
gacgcctctcaggacacgaccgttttcagccagtacacccagagccaagacgactctctg
gataaagttccaactgaacaggtcgatggcgtcccaccagaatctcccagtgagacagaa
gagaaacccagagaagatgctgaaattctttctaaagaaactcaagactactccagtcct
aaacatgatgacaacatggaggagagcatcccagactcggcagatgtttttctggaggag
cctactaaaagcactgagaggactgaagacatggacgttgagttaaaagacagtgcgagt
ccaaacacgtctgcttcttctgatttggtgtcggggactcctcaaaaacccagcagtcgg
cgccagtcatttattaccttggaaaagtatggcgagggaaagccggccagtcccagcagt
ggatcgtcttttacaggtcctcttgtaaagacgtccaaaagtcaagatcactctagcgag
aagaacatattgtcccctgaggcctcacagacatccacagcaccaaactctcaggatccc
actccttcagaaacggttggtccacagtgtcctggaagcgagtctcctcggaggcctaaa
gagtcgaggacaagaagtgagccggtaagattgattgagagaatgcaaagtgactcggca
gaggaggaagatgttatccctgacacgcagacaaaagacgaggacaaagaaagcactagt
tactcagaagaaatcaactcttccagtcaggatgaggaatctgaaacggtgttggatgat
tcccagtcatctctgacccagacaccttcaggtgagccaagacgatccagacgccacaga
ataagacctcagctccctggagaagacccagacacccgtgaggcaaaatacacacacgtc
aaaagaagacgttctggagaagatccaaaaagtgaatcttctaatttggcaccaagcaga
ccgaacacaagaagtaaacaggctgcggaggagaacagtagcagaatccagctgcgatcg
aagtctcaaggcaacgccaatgaatctagccaaagtaactctcaggtaagacaccgaaag
aagatcaaacttaacaacctttcagaggatcttcttggatctcctgaacgtaaaaggaga
agcaccagtgggctggattctagccagactgacatcaaatcagaatcactctccagtcat
gaaagtcaaaagcacagaaaacgcaatgagattagcaaagtttcaaaggagggtgctgac
tctgaaaagcccaaagaagaattcaaccacactgttacagagagtatggtagatctgtct
cagaaagacgatccctacccaaacactgactcccaaacggtcgtacctttggctcagact
gaaaagtctgaggaggtgaagtcggaagaacagactgaacaaggtgagagccaaaaggaa
aagcaagacgttgtcacatcttctccccagtgtgaagacaaatctcgagaacagatagat
tctgatgccgtcatgttttctccagtggaagagtccaaaggtgaaactagaaatttgcta
cagaatcaggaaattatccaagacaatgccatagaaactgtgattgacaactgtagccag
gaagagtcccaggtcacgccttcgtctgacagtcagattagacgaagatccaggcgaagc
aaagcaacagagtctgaagacaaagatgagagcatcaactcttcaggacggttgacacgt
tctcagacgtccacccctgtcaatcaacctgaagctggagttggaggcaggaccagaagg
agcaaactagaatctagtcaaagctcaaccccagaaagttctcggtcattagattcatcc
ggatcagggtcgtctcaaggcaagggcagactaagatcctctcagtcatcagcatctagt
gtagagacgccagagtcagagtcctcagaagtcttagttaacgccgttcgcaaaaagaaa
gggaggaaacctcgagcatctctgaagaatccacttcctcttgaaacgaaggaggacata
ttggaagatgcttctcaaaatttggagacacaaaacagtttagaagaatcattagagaac
caagatccaaaggaatctggaagcaagacagagtcaaatgaggaagagtctgagtcccca
atgattactgagacactggctgatttacctctggagacagaagattcaaagaagacagaa
agtgaagaggcaacccaggataccaggtcactggacactactgaacaaagagactcaaac
agtgaaaaggattctttacaagaagtagaagtgcttgaatcttctgtgtttggagacgca
ccagcacaagattcatgtctgccggctgaggagaaactgcaagcctcggagacgtccaaa
gaaacagcagaaaaggtttctgaaactgaaggagttactgaaaaacaggaggaatcaaat
tcagaccagcaagactttccagctcctcctccagaagaaccctctcctgaggagcttcag
caaagtcagatggagtgtgcacaggtcactgaagaggaggaaccgtctgccacacaccag
gtctcggaggccagtcctaaggaggacattactctacaagacaatgaagacgatcaacct
gagacatctgaggacaaactcgaaaaggcacctgccaccgaaacgtcgggtgctgctgat
ctggactgcaccactgcagcgtcctcacaagctgctgcccaggactctccagttaaacaa
aaagacctggaggctgtaacagaaccagatgtcggacagagtcccagcaatgggctgttg
aagggaacatggtctccttcagcttccccttccaacagcatcctcaagaaatgccagaag
agacagttagaggtggaaacgacctctcctcttgtcaagtcccgccgtgtatctttcgct
aaccccatccaacagcaggagacggctgatgacatcgaccggcgcagtccggctctgaga
accagctctcccagaaggtccaaaggatgtaacgtccctcagcagaagcacattacaact
ccaacaaaaggcacgctggtcctgagccccagaaatatccacagtccaagttacaggagc
tccaagaagtgcctgatttctgaaatgactcgggagcctcgagccgtgcccagagactgc
atctacccgtccctggtgggctgctcggcccccgtggaggctgtgctttctcagatctct
tccaccatgtggtctcgagggttcggacagctgattcgcgctcgaaacgtcaaatcagtg
ggcgacctctgtgccctgactccgtctgagatcaagactctgcccatccgatctccaaaa
atctccaacgtcaagaaggcgctgaagatctatgagcagcagcgcaaagggagagcagat
gagctgaagagcttcgacgaaacggagaggatgacctctgaggtggaggaggcggccagt
ccttgcaaccatgacgacgaggagaagacctcagcagagactctggccacagagctgctg
gacgagccgctgcctgcagacgccgcggcggagcaccaggacggggagcagcgacccgcg
gtgccggcggaccccgctgcagagctgccggcggccgtggaggctctggcctgcagggcg
acccctctggagctcagccgctgctcaccacaacagctgctgcagatgcacgagcagctg
ggaggcatgatgaggggcgtagcggtggagctgcaggcacgcctctgccacgccagcgac
aaacacagaacgactcccaggagcggacagacgcactga

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