KEGG   Xiphophorus hellerii (green swordtail): 116723061
Entry
116723061         CDS       T07363                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04382  Cornified envelope formation
xhe04510  Focal adhesion
xhe04512  ECM-receptor interaction
xhe04514  Cell adhesion molecules
xhe04810  Regulation of actin cytoskeleton
xhe04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116723061
   04514 Cell adhesion molecules
    116723061
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116723061
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116723061
   04810 Regulation of actin cytoskeleton
    116723061
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116723061
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhe04147]
    116723061
   04515 Cell adhesion molecules [BR:xhe04515]
    116723061
   04090 CD molecules [BR:xhe04090]
    116723061
Exosome [BR:xhe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116723061
  Exosomal proteins of breast milk
   116723061
Cell adhesion molecules [BR:xhe04515]
 Integrins
  Integrin alpha subunits
   116723061
CD molecules [BR:xhe04090]
 Proteins
  116723061
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 RNaseH_like Integrin_alpha Protocadherin
Other DBs
NCBI-GeneID: 116723061
NCBI-ProteinID: XP_032423494
LinkDB
Position
7:16801818..16823420
AA seq 1083 aa
MALLQQRGHFAVQAALFLLCHLLEPSGLRAFNLDTRHVIRKGGEPGSLFGFSLALHQQVN
PNKVLLLIGAPRAKALKNQKSNVTGGLFKCEISESDNCERIEFDNDEDPSQESKQDQWMG
VSVQSQGPGGKVVTCAHRYQKHSRVSQSVLGRCYVFSQNLTINNDDMDGGQWKFCEGRRG
ETDHVSYGVCQQGLGVTFTKDYHYVVFGAPGARNWKGMVRVEQRNITLIERGIYNDGPYE
YENDNDNFKHPNNPVPAHSYLGFSLDTGHHIMKSRDLTVVAGAPRANHKGLVALLKKKFV
EQLVVEQLLHGPGLGSSFGYDVAVVDLNGDGWQDIVVGAPYFYMKDTDIGGAVYVYINKA
GQWDNVTPIRLNGTKDSVFGLAVENIGDVNQDSLNDIAVGAPQDDEGAGRVYIYHGSAQG
IKTTPAQILSGKEHSLRYFGYSLAGNMDLDGNSYPDLAVGSLSDAALIYRARPIVNIRKN
ITVSPEEIDLSVGCDSSFCFTVKACFNYTATSYNKRLTISYFIEADGERRKQGLNSRVIF
LTKTHPESDVLFNGTLELQNQNAGQCVSINVGLKDNIKDKMRSVVIEVSAEIIKAKLKKM
GNGLPQIMPVLDATQPRQAVTEVNFVKEGCKNKRICYSNLKMENSLHYIPISKNEFTPLS
KSAHNIPEFKLTYEKKDLAVKVTVTNKNGDDAYEAKLVGKFPEILSYSGVRSSNKQILCT
ANHNGSEAECELGNPFKSNSKVMFYIILSTAHNAVKLNTTEFEIDLHLQTTSSQNISSVK
IKSKVITEFPLTLSGEAKPSQVSFGGVVRAETAMKTEEDAGSLINFTFRISNLWTPSISP
PPVTLHIHWPRDNKDGKWLLYLVKVTSHGPEKIACSPQSEIHSLKDIWKRSPSLTKQEIV
KKERKLGGKIAFRSSSTKVLSCEKESKCVVLKCPLQGIDGTAVELRSRLWNSTFIEEYAS
FPTITLVVKASLVLESQAQNIILKSPDFTVKVPVSPDSDVAQFGVPWWIILIAVLAGILI
LALMVFLLWKCGFFRRSKQDDSIPRYHAVRIKKETPGHIDGKMKPGALEKKQWMTTWIND
DYS
NT seq 3252 nt   +upstreamnt  +downstreamnt
atggcgctgctgcagcagagaggacactttgctgtccaggctgcgcttttccttctctgt
catctgctggagccgagcggactgcgcgctttcaacctggacacccgtcatgtcatcagg
aaaggcggggagccggggtctctcttcggcttctccctcgccttgcaccagcaagtcaac
ccgaataaagtcctgttactaattggtgccccgagagccaaggctttaaaaaaccaaaaa
tccaatgtgactgggggcctttttaagtgtgaaatctctgagtctgataattgtgagcgc
attgaatttgataatgacgaggatccaagccaggagagtaagcaggaccagtggatgggt
gtgtctgtgcagagtcagggacccgggggaaaggttgtgacatgtgcgcatcgatatcaa
aagcatagcagagtttcccagtctgtcctcgggcgctgttatgtcttcagtcagaatttg
accatcaacaacgatgatatggatggaggtcaatggaaattttgtgaagggagacgagga
gaaaccgaccatgtatcgtatggagtctgtcaacaaggtctgggggtcaccttcaccaag
gactaccattatgtggtgtttggagccccaggagcaagaaactggaaagggatggtacga
gtggaacaaagaaacatcacgttgatagaaaggggtatatataacgatggaccgtatgag
tatgaaaacgacaacgacaactttaaacaccccaacaaccctgtgccagcccacagctac
cttgggttctctctggacaccgggcaccacatcatgaagagccgtgatctgaccgtggtg
gctggagcaccgagagccaatcacaagggacttgtagccctgctgaagaaaaaatttgtc
gagcaactcgtagtggagcaacttctgcatggcccaggactgggatcctcatttggatac
gatgtggctgtggtcgacctgaatggtgatggatggcaagacattgtcgtgggagcccct
tacttctacatgaaggacacagacatcggtggagccgtttatgtttatatcaacaaagca
ggacagtgggataatgtaactccgattcgcctaaatgggaccaaagattcagtgttcgga
ctggcagtggaaaacatcggggatgttaatcaggactcacttaatgatattgcagttgga
gcgccacaggacgatgagggggcaggaagagtctacatttatcatggatctgcacaaggg
ataaaaacaactcctgcacagatcctttcaggcaaagagcacagccttcgatattttgga
tattctctggcaggaaacatggacctggatggtaactcttatccagacctggctgtagga
tctctgtcagatgcagctttgatttacagggcgagaccaattgttaacatcaggaaaaac
attacggtttctcctgaggaaattgacctcagtgttggctgtgattccagtttttgcttc
actgtgaaagcatgtttcaactacacagcaacatcctacaacaagaggctcacaatcagc
tacttcatagaggcagatggagaacgcaggaaacaaggactgaactccagagtgattttt
ctgactaagactcatcctgaatcagacgtcctgtttaatggcaccttggagctccagaat
caaaatgcaggacagtgtgtcagcataaacgtcgggcttaaggacaacattaaggacaag
atgcgcagcgttgtcattgaagtttctgcagaaattatcaaagcaaaactaaaaaaaatg
ggaaatggtctacctcagataatgccagttttagacgccacccagccacgacaagctgtc
acagaggtaaactttgtaaaggagggatgtaaaaataaaaggatttgttatagcaattta
aaaatggagaacagtctgcactacataccaatcagcaagaatgaattcaccccgttaagc
aaaagcgcacataatataccagagtttaagctgacttacgagaagaaggacttggctgtg
aaggtgacggtgaccaataaaaatggtgacgatgcctacgaagcaaagcttgtggggaaa
ttcccagaaatcctgtcgtattctggagttcgatcttcaaacaagcagatcctctgtact
gccaaccataatggatctgaagcagagtgtgagctgggaaacccatttaagagcaactca
aaggtcatgttttacatcattctgagcactgcgcacaatgctgtaaaactcaataccact
gagtttgagattgatctgcacctccaaacgacaagttctcaaaatatttcctctgtgaaa
ataaagagcaaagtgataactgaattccctttgacattgagtggtgaagccaaacccagt
caggtttcctttggaggtgttgtgagagcagaaactgcaatgaaaacagaagaggatgct
ggaagtttgattaattttacatttagaataagtaacttgtggacgccttcgatctctcct
ccccccgtcactctacacattcattggcccagagacaataaagatgggaaatggcttctg
tacttggtgaaggtcacatctcatggacctgagaaaatcgcctgctctcctcaatctgaa
attcactctctcaaagacatttggaagagatctccttccctgacaaaacaggaaattgtc
aaaaaagaaagaaaacttggtggcaaaattgcttttcgttcaagcagtactaaagttttg
tcctgtgagaaggaaagcaaatgtgtggtgctaaagtgccctctgcaggggattgatggt
actgcagttgagctgagatctcgtttgtggaactccaccttcatcgaggaatatgcttcc
tttccaaccataactttagttgtgaaggcttcacttgtacttgagtctcaggctcagaac
attatcctgaaatctcctgactttactgtgaaggtgcccgtatccccagacagcgacgtg
gctcagttcggagttccttggtggatcattctgatagcagtcctggcaggaatcttgatt
ttggcattgatggtgtttctgttgtggaagtgcgggttcttcagacgctccaaacaagac
gacagcatacctcgctaccacgcagtgcggataaaaaaggaaactccgggccacatcgat
ggaaaaatgaaacctggtgctttagaaaagaagcagtggatgacgacgtggatcaacgac
gattattcatga

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