Xiphophorus hellerii (green swordtail): 116723084
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Entry
116723084 CDS
T07363
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116723084 (aff3)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116723084 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
116723084
NCBI-ProteinID:
XP_032423546
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All DBs
Position
7:12422179..12442556
Genome browser
AA seq
1242 aa
AA seq
DB search
MPTVLGGKGKLSIVCLLLRYAYSQGKRSQHKCCAKDILEDMTQSWPSQQALGGEQTQRIL
YNPKDARHPATQQRQSRGDTQQRMARHPYVAPHKSMLADDLKISSDEDDTQRAIHESASW
DRHSLSAQRAHTHGRRVRHSSSESSDSDSAESGSSSLRSHSPSPELHPDPLSPASARPLS
NNKEVDHRSTTQWQLDKWLKRSKKKSARTDQDLPQAIAEPEASPLSQRAPSPARSWDSNQ
EYSPSQTPIPSPQFSYSNDNSPVPSPGYSYCPSPSPFPSTCPSPTSSPQNSPPPSPVLSV
CPSPCGTPRTSRSPSPIPNHLPRSPSPTLPTPSRGFHYHGGQNQNQSHSILTSTPHRTKI
RPWIAPLLGTSLKSKPPSNVHLQPSFQLKSKNHHTQDQVQSQSKLKDFGGLNSQLNPNQK
STHKSTSYPRTKQFSNTPKTKNPTHFDQIQGNQSKSKPQPPFQQPSQQSPKRTKHIVPTG
CETNTAPSTHSTSASKATRNSVTGSTSGPFSNLIHWTKLWEATNSNPTHPNHAKTSQRKP
QSKEQEVVQRKHHLIQAERRLHESKEDRHHHEQQLGKLERKEDRRLAEEQLLRRPWIQSL
PEEEEEEEERATEQQGGRKNTARGENRKKGEQAKEEWKAVRQVSSNDKQHHLRETLDCQG
RTKKGRRCEETREVIRDQLPLLSTHSPPPQRPSFNSSSSSLSSSSSTTPSNSDSESECLG
SITKVSAESTFHRRVTKTGNQAASRPDTTRPKSVHPRRPSSDNPCERRQQSESKQRLYTL
VPFGRGEKTPSTAQRGLRNLVVQIDLCLLKRVPDSPTDSTGKKLSPSKSSSLMKEKSKEA
MKHVYDPETSVTDGKRKRKLENGIGQRETKRSLLYLNEAPGQKEPSSLPAENIITETVHN
GYLEEFLDSKRPASPLSPLSPLPQSPEPTKPVSKTKTTTEQQQSRAQKSKDKSRDADVKP
KTEVECVKVSRQHQPPPESSWGPAGHRGSVPSQEISHHAEYYLHEAKRMKHRADAMVDKL
GKAVNYVDAALSFMECGKAMEEGPLEAKSPFTMYSETVELIRYAMRLKGHSGPGARQEDK
QLAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKSSSKVPTTPPGWMDSGKATTGLP
SSLSPTAKHHRRGSNEGSSSVSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAKE
NKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggtggcaaagggaaactttccattgtctgccttttgctccgatac
gcatattctcagggaaaaagaagccaacacaagtgctgtgccaaagatattctcgaggac
atgactcagtcctggccttcccagcaagccttggggggggaacagacccagcgaatcctc
tacaaccctaaggatgcaaggcatccagccacccaacaaaggcaaagccgtggggacact
caacagcgaatggctcgtcatccttacgtggcacctcacaaatcaatgcttgctgatgac
ctgaagataagtagtgatgaagatgacactcagagggccattcatgagtcagcttcctgg
gacagacacagcctgtcggcgcagcgagcgcacacacatggcaggagggtgagacattcc
agctcagaatcctcggactcagactctgcagagtcgggcagcagcagccttcgttctcac
agcccgagtccagaacttcacccagatcctctgtcgcctgcaagcgcgcggccactgtcc
aacaacaaggaggttgatcatcgttccactacccagtggcagttagataaatggctgaaa
agatcaaagaaaaaatctgccaggactgatcaagatttgcctcaggctattgcagaaccc
gaggcctctcccctaagtcagagagccccctcaccagccaggtcatgggacagcaatcag
gagtatagcccgagccaaacccccattccaagtccacagttcagttacagtaacgataac
agcccagttcccagccccggttacagctactgcccaagtcccagcccattccccagcacc
tgtccaagtcctacctctagtccacaaaatagtccacctccaagtccagttctaagtgtt
tgccccagtccttgtggtaccccaaggaccagtcgaagcccaagtcctatacctaaccat
ctcccaagaagtcctagccccaccttacccactccatcaaggggttttcactatcatggg
ggtcagaaccagaaccagtcacattctattctaacatctaccccccacaggactaaaata
agaccatggattgcaccattgcttggcaccagtttaaagagtaagcccccaagtaacgtt
catcttcaaccttcttttcagctcaagtctaagaatcatcacacacaagaccaagtccaa
agccaaagcaagttgaaagattttggaggcttaaattcccaactaaatcccaatcaaaaa
tctacacacaagtctacttcatatccaagaactaaacagttttccaacacccccaaaact
aaaaatccaacacattttgatcaaattcaaggcaaccaatccaaatccaagccacagcca
ccatttcaacaaccttcacaacaaagccccaaaagaacaaagcacatagtgcccactggc
tgtgaaaccaacacagctcccagtactcattctacatctgccagtaaagctactagaaat
tctgttactgggtcaacctctggacccttctctaaccttatacactggacaaagctgtgg
gaggctacaaactcaaaccccacgcatccaaaccatgccaaaacttcacaaaggaaacct
cagtctaaggaacaggaagtagttcagagaaaacatcatctgatccaagcagagaggaga
ctacatgaaagcaaggaggatagacatcatcatgaacaacaactagggaagctagaacga
aaggaagacagaaggctggcggaggagcagttactaagacgtccctggatccaaagtttg
ccagaagaagaggaggaagaggaggaaagagcaacagaacagcaaggtgggagaaagaac
acagcaagaggagaaaatagaaagaagggggagcaggcaaaggaagaatggaaagcggtc
agacaagtgtcttctaacgacaaacaacaccaccttcgagagactttagactgtcaaggc
aggacaaaaaagggaagaagatgtgaggagacgagagaagtaatcagagaccaattaccc
ctattatccacacactccccacctccccagagaccatccttcaactcctcctcctcctca
ttatcatcatcatcttctacaaccccctccaactcagactctgaatctgaatgtcttggc
tctatcaccaaggtttcagctgagtccacttttcacaggagagtcaccaagacagggaac
caagctgcaagcagacctgacactaccaggcctaagtcagtacaccccagacgacccagt
tcagataatccatgtgagaggaggcagcaaagtgagtcaaagcaaaggctctacacacta
gtaccatttggacgaggagaaaaaactccttccactgcccaacgggggctaagaaatctg
gtggtgcagatagacctctgtcttctcaagagagtcccggacagtcctacagattccact
ggtaaaaaactatccccttccaaatcatcttcattgatgaaggaaaaatctaaagaggct
atgaaacacgtttatgaccctgagacttccgttacagatggcaaaaggaaacgcaagcta
gagaatggcataggtcaaagagaaaccaagaggagtcttctttatctaaacgaggcacca
gggcagaaagaaccttcatcattaccagctgagaacatcattactgagacagtgcacaat
ggatacctggaggagttcttggacagcaagaggccagcgtctcccttgtctcccttgtct
ccactgccccagagtcctgagcccaccaaacctgtctccaaaacaaagacaactaccgaa
cagcagcagtcccgtgcacagaagagcaaagacaagagcagagatgcagatgtaaagcct
aagactgaggtggagtgtgtaaaagtatcaaggcagcatcaaccaccacccgagtccagc
tggggaccagctggtcacagagggtccgtaccaagccaagaaatttctcaccatgctgaa
tactacttacatgaagctaaacggatgaagcaccgtgctgatgcaatggtggacaagcta
ggaaaagctgttaactacgtcgatgcggctctgtccttcatggaatgtgggaaggcgatg
gaggaggggccactcgaggcaaagtctcctttcaccatgtattctgagacagtggagctg
atccggtacgcaatgaggctcaaaggtcactctggccctggagcgagacaggaagacaaa
cagctggcagtgctgtgtttcagatgccttgccctcctttactggcagatgtttcgctta
aaaaaagatcatgcactaaagtactccaaagtgctacttgactattttaagagttcttcc
aaagtgcctacaacgccacccggctggatggactctgggaaggctacaacaggactcccg
tcctcactgtcacccactgcaaaacaccacagacggggttcaaatgagggcagcagctct
gtgtcgctcataagcataccccagcgcatccaccagatggcagcaaaccacctgaacatc
accaacagtgttctgtacagctatgagtactgggaggtggcagacaacctcgcaaaggag
aataaagaattcttcaattacttgaatactttatctgggccattgactcttcacagtagc
attgctcacgctgttcaatacaccaggcaggctcttcagtggatacgcattagtgccaaa
ctgaactga
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