Xiphophorus hellerii (green swordtail): 116723089
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Entry
116723089 CDS
T07363
Symbol
rad51c
Name
(RefSeq) DNA repair protein RAD51 homolog 3
KO
K10870
RAD51-like protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03440
Homologous recombination
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116723089 (rad51c)
03460 Fanconi anemia pathway
116723089 (rad51c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116723089 (rad51c)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
116723089 (rad51c)
FA (Fanconi anemia) pathway
Other FA pathway factors
116723089 (rad51c)
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Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
ATPase
AAA_24
AAA_18
DnaB_C
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
116723089
NCBI-ProteinID:
XP_032423560
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Position
1:32707559..32711292
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AA seq
352 aa
AA seq
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MKRPVSSLSLGSSLKGKLVRAGFQFTTDLQDLNPEHLSAEAGVSQQEALEALQTASSGHG
VAPVTALELLQKEEEFRSIVTFCSQLDEALGGGVPVGKVTEICGAPGVGKTQLCLQLAVD
VQVPAVFGGLGGQVLFVDTEGGFQVQRLVDLAGAAVRHCSLLAEDEEQRVAMTTFTVETI
LSNVFLVRCRDYVELLAELHLLADFLSNRPRLRLLVIDSVAFPFLRLHDDLSQRTRLLQG
LGLRLIAAATGHNIAVVTTNHMTTRLRGSQAQLAPALGDIWGHAPSIRLLLRWEESRRLA
SIVKSPGHMDASVQYQITYQGFRDADQSERPPSKRPRSQTNQSASSRKNTGT
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcccgtctccagtttgagtttgggctccagtttgaaggggaaactggtgaga
gctggtttccagttcaccacagacctgcaggacctgaacccggaacacctgagcgcagag
gctggagtctcccagcaggaggcgctggaggcgctgcagactgccagctcggggcacggt
gttgccccggtgacggctctggagctcctgcagaaggaggaggagttcaggagcatcgtg
acgttctgctcccagctggacgaggcgctcggaggaggagttcctgtcgggaaagtgacg
gagatctgcggagctccaggagtcgggaaaacacagctgtgcctacagctggccgtggac
gtccaggtgccggcggtgttcggcggtctcgggggtcaggttctgttcgtggacacggag
ggcgggttccaggtccagaggctggtggacctggctggcgctgctgtgcgccactgctcg
ctgctggctgaggatgaggagcagcgcgttgccatgacgaccttcacggtggagaccatc
ctgtcaaacgtcttcctggtgcgttgccgtgactacgtggagcttctggccgagctgcac
ctgctggccgacttcctgtcgaaccggccgaggctccgcctcctcgtcatcgacagcgtg
gcgttccccttcctgcgtctccatgacgatctgtcccagaggacacgcctcctccagggc
ctcggcctgcggcttatcgctgcggcgacgggccacaacatcgccgtggtaaccaccaac
cacatgaccacgcggctgcgcggcagccaggctcagctggcgccggcgctgggcgacatc
tggggccacgccccctccatcaggctcctcctccggtgggaggagtcacggcggctggcc
tccatcgttaaatccccaggtcacatggacgccagcgtccaataccagattacctaccag
ggctttagggacgctgaccaatcagagcggccgccaagcaaaaggcctcgaagtcaaacc
aaccagtcagcttccagcaggaaaaacactggcacatga
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