Xiphophorus hellerii (green swordtail): 116723114
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Entry
116723114 CDS
T07363
Name
(RefSeq) rho guanine nucleotide exchange factor 7-like isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116723114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116723114
Membrane trafficking [BR:
xhe04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116723114
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
SH3_1
SH3_9
CH
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
116723114
NCBI-ProteinID:
XP_032423598
LinkDB
All DBs
Position
7:complement(12381418..12417524)
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AA seq
802 aa
AA seq
DB search
MNSAEQTVTWLITLGVLESPKKTISDPEAFLQSSLKDGVVLCKLLERLSPGSTENIYPEP
KNDGECLSNIKEFLKGCTSFRVEPFEASDLLLGLNFSKVLSSLVALNKVTADIGVGSDSV
CARHSSAHRIKSFESLSSQASLGRSSKLLQNQFRSLDMSENSGQQLLVKARFNFQQTNED
ELTFTKGDIISVTRQEEGGWWEGILNGKTGWFPSNYVREIKGSDKQVSPKSVTLKSPPKG
FDTSVISKTYYNLVLQNILETETEYSKDLQSLLTNYLRPLQNIDKLSSADVALILGNLEE
ISTFQQMLVQSLEESTKLPESQQRVGSFFLNLMPQMKALYVGYCSNHPSAVNVLTQHGET
LRDFMEGHGAVAPGILTLTTGLSKPFMRLDKYPTLLKELERHMEENHADRPDILKCMGSF
RNLSAHCQEVRKRKELELQILTETIRLWEGDNIKTLGSVIYMSQVLVQSPMSEEKNERYL
MLFPHILLMLSASPRMSGFIFQGKLPLTGMIVTKLEDCEAHKNAFELNGTMFDRLQVVCA
NQQDLQDWVEHLTRQIKHSAATAPSHKPLAVPCHTLPSHPLTPSRHAESRAMTVAPTYHT
LPHPSSHGTTHSTMTWGPLEPPNTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKSVKK
LLPKRKPERKQSEEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSRSRPETGLHV
IIPGEEKVFLDDPNRNGQSVLEEKSLVDVVYALRDEVQELKQDNKKMKRSLEEEQRARRD
LEKVVRRVLKSINDPAWDETNL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggcggaacagacggttacgtggttgatcacgctcggggtgctggagtcgccg
aagaagaccatctcggatcctgaagccttcctgcagagctccctaaaggatggggtggtt
ctctgtaagctgctggagcggctcagcccgggctccacggagaacatttatccagaaccg
aagaacgacggcgagtgtctgagcaacataaaggagtttctcaagggctgcacatcgttc
cgcgtcgagccgtttgaggccagtgaccttctgctgggcctgaacttctccaaggtgctg
agcagcctggtggccctgaataaagtcactgcagatatcggcgtggggagtgactcagtg
tgcgcccgacactcttctgcccaccgcatcaagtcgttcgagtcgctgtcctctcaggcg
tcgctgggtcgatcctccaagctgctgcagaaccagtttcgaagtctggacatgtcagaa
aacagcggacagcagctgctggtgaaggctcgcttcaacttccagcagaccaacgaggat
gagctcacctttaccaagggtgacatcatcagcgtgacccgtcaggaggagggcggctgg
tgggaggggatactcaacggcaagactgggtggtttcctagcaactatgtgcgtgaaatc
aaaggctctgataaacaagtgtccccaaagtctgtcaccctgaagagcccaccgaaaggc
ttcgacacttctgttattagcaagacgtactataacctggtgttgcagaacatcttggag
acggagacggagtattctaaggaccttcaaagcctccttacaaactacctgcgacctctt
caaaacattgacaagctgagcagcgccgacgtagctctgattctggggaacctggaggag
attagcaccttccagcagatgctggtccagtcactggaggagtctacaaagcttccagag
agccagcaaagggtgggcagctttttcctgaacctcatgcctcagatgaaagcgctctat
gtcggttactgttccaaccatccctctgctgtcaatgtgcttactcaacatggtgaaact
cttcgggactttatggagggccatggtgcagtggctcctgggatcctcacgctgaccact
ggcctcagtaaaccattcatgaggctcgacaaataccccaccttactcaaagagctggag
aggcacatggaggagaatcatgcagaccgaccagatattctgaagtgcatggggtctttc
aggaacctttcagctcactgccaggaggtgcgaaaacgaaaggagctggagctgcagatt
ctcacagagaccatccggctgtgggagggagacaacatcaagaccttgggctcggtgata
tacatgagtcaggtgttggtccagagtcctatgtctgaggagaagaatgagcgctacctc
atgttgtttcctcacatcctcctcatgctgtctgctagtcccaggatgagcggtttcata
ttccagggaaagctgcctttgactggcatgatcgtgaccaaactagaagactgtgaagcc
cataaaaatgcctttgagctaaacggcaccatgtttgaccgtctccaggtggtgtgtgca
aaccagcaggacttgcaggactgggtggagcacctgacgagacagatcaaacacagcgcc
gccacggcccccagccacaaaccacttgctgtcccctgccacacgctcccatctcatcct
ctcaccccgtcccggcatgctgagagcagggccatgactgtggctcccacctaccacacc
ctgcctcacccatcctctcatgggacgacccacagcacaatgacatggggccccctggag
ccaccaaacacccccaaaccctggagcctgagctgcctgcgacccgcgccgcctttacgg
ccctccgctgcactctgctacaaagaggatctcagtaaaagtcctaagagtgtgaagaaa
ctccttcccaaacgcaaacctgagagaaaacagtctgaagaggaatttgctctaaggaag
agtacggccgctctggaagaagacgcccagatcctgaaagttattgaggcatactgcacc
agcgccaaaaccaggcagactctgaactccagatcacgaccagaaacagggctgcatgtg
atcatccctggtgaggagaaggtttttctagacgatccaaaccgcaacggacaaagtgta
ctggaagagaagagtttggtggatgtggtttacgccctgcgggatgaggttcaagagctg
aaacaggacaataagaagatgaagagatccctggaggaggagcagagagcacgtagagac
ttggagaaagttgtgcggcgagtactgaagagcattaatgacccagcgtgggatgagacc
aacctgtga
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