Xiphophorus hellerii (green swordtail): 116723115
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Entry
116723115 CDS
T07363
Name
(RefSeq) zinc finger E-box-binding homeobox 2-like isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116723115
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
116723115
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_2
zf-met
zf-C2H2_6
zf-C2H2_15
Zf-C2H2_ZNF451_C
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
116723115
NCBI-ProteinID:
XP_032423600
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Position
7:26980946..27026059
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AA seq
1172 aa
AA seq
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MMAQSPRWKRRKQLNPRRKSVLNYDSVLETTSETDEDDQTLLHDDSSFTGGAGDDEEAGS
PVAVPALEASPRVGHALLSNREPDDSEHRGEDECIDDRSSEYDALGPEASLQAVEDGAGR
QLDGISGLDEFFLKRKLEDDDGHQATIAEYLQRSDTAIIYPEAPEEVTRLSTPEAGGQDE
SEHDLPSSATDDFAQLLTCPYCERGYKRLTSLKEHIKYRHENTEETFTCLLCAETFNQRA
QLERHMTTHKPTVDQPPLLSEGAANRKFKCSECGKAFKYKHHLKEHLRIHSGEKPYECSN
CKKRFSHSGSYSSHISSKKCIGLVALNGRVRNGNNSKPSSSPNSTTSSPGSPALAHLRQK
LENGRLLGLQDQQGQVDIKTEPMDFNDYRLLMASQHGFGGPGVYLNGRSGSPLGIQGSSQ
NSFQHLGSMGIDLSLLGYAGPLGSSLCEVQKVLQIVDNTVCRQKMDGNPEELSKLRAYMK
ELGAQMEAHASFQVIGSNSPTKSIIDYTLEKVNEAKNLINDSKMQVDVKKEKPNQSVDLS
GEEKFSDGQNQFLTFSCQYCKEIFPGPIPLHQHERYLCKMNEDIKAVLQHPEGSPVGCRG
LRADELSRTERPHSPTNLFKDHMSVLKAYFAMNADPNSEELLKISLAVGLPQELVKDWFS
QWKIQNNHMDSLRKKFPTPERGRPDRSLSRSPGSLPVIDLHNGFINTDPTHRLTKINQFT
ANRQTKGDKPIDPADSLRSNTSSPLNLSSTSSKHSQSSSYTPNSLTSEDAHGDTPLDLSL
PKHMAQKRPKPNGFITEHNGEVSVREQGSGSLALVKIKKEVLGSDSGGSSIHQLEKSTSP
IFGINPFAGGPVYTSLPPHGAFPPPTFISPAQATIPGLRPYAGLDPMSFLPHMAYTYATG
AATFAEMQHRRKYQRKAGFQGELLDGTADYLSGLDDLTDSDSLLSRKKIKKTESGMYACD
LCDKTFQKTSSLLRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGK
RFSHSGSYSQHMNHRYSYCKREAEEREAAEREAKVGGLAGGLEPTELLMRRAYLQGLGPL
GYSDPEEQPEDGGGTILRDGREGGGREVGGVDNKMYEEVTDGQEASFRNREEEGDSRSQM
DSMMDEGGKDSAQLMDTCSREGKTDGTLEQED
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccagagtccccgatggaagaggcgcaagcagctcaacccccgcagaaagagc
gttctgaactatgacagtgttctggagacaacctcagagacagatgaggacgaccagacg
ctgctccatgatgacagcagcttcaccggaggagcaggagatgatgaagaggcgggtagt
ccagttgctgtccccgccctggaggcgtcgcccagggtcggccacgccctgctgtccaac
cgggagccggacgactcggagcaccggggggaggacgaatgtatcgatgatcgcagcagc
gagtacgatgctctgggacctgaggcctctctgcaggcggtggaagacggtgcagggagg
caactggatggcatctccgggctggatgagttcttcctgaaacgtaagctggaggatgat
gacggccaccaggcaaccatcgctgagtacctgcagcgtagtgacaccgccatcatttac
ccagaagccccggaggaggtgacgcgcctgagcacgcccgaggccggcggtcaggatgag
agcgaacatgatctgccttccagtgccacagacgacttcgcacagctgctcacctgtccg
tactgcgagcgcggctacaagcggctgacatctttgaaggagcacatcaagtatcgacat
gagaacacagaggagaccttcacctgcctgctgtgtgcagaaacattcaaccagagagcc
cagctggagcggcacatgaccacacacaaacccactgtggaccagccaccgctgctcagt
gagggagctgcaaaccgcaagttcaagtgcagcgagtgtggaaaagccttcaagtacaag
catcacctgaaggagcatctccgtattcacagcggtgagaagccatatgaatgctccaac
tgcaagaagcgcttctcccactcgggatcctacagttcccacatcagcagcaagaaatgc
atcggtctggttgcccttaatggacgagtacgcaatgggaacaatagcaaacctagctct
tctccaaactccacaacatcctcacctggaagccccgccttggctcacctgcggcaaaaa
ctagagaatgggcgtcttcttggcctgcaagaccagcaaggtcaggtggacatcaaaacc
gagccaatggactttaatgactaccggctgctaatggcttcacagcatgggtttggggga
ccaggcgtctacttaaatggtcgtagtggaagcccactgggtatccagggctcctcacaa
aactcctttcaacacctgggtagcatggggattgatctctctctgctaggatatgctgga
cctctcgggagcagcctatgtgaggtacagaaggttctccagattgtggacaacactgtt
tgcaggcagaagatggatggaaacccagaggagctgtccaagcttagagcctatatgaag
gagttgggtgcccagatggaggcacatgccagctttcaggtgattggcagcaacagtcct
accaagagcatcattgactacacactggagaaggtcaatgaggccaagaaccttatcaat
gactccaagatgcaagtggatgttaagaaagagaaaccaaaccaatcagttgatctcagc
ggtgaagaaaagttctctgatggacagaaccaattcctaacattttcttgccaatactgc
aaggagatcttccctggacccatcccacttcaccaacatgagcgctacctgtgtaaaatg
aacgaggacatcaaagcagtcctgcagcatccagaaggcagtcctgttggctgcaggggg
ttgagggctgatgaactgtcccgtactgagaggccccacagtcccaccaaccttttcaag
gaccacatgtcagtgttaaaggcttactttgccatgaatgctgaccccaactctgaagaa
ctgctcaagatttcccttgcggttggccttccacaagaactggtaaaagattggttttca
caatggaaaattcaaaacaaccacatggacagtttgaggaaaaagttcccgactcccgag
cgtgggagaccagaccgcagcttaagtcggtctccagggtcccttcctgttatagattta
cacaatggctttattaacactgatcccacccacagactcacaaagatcaatcagtttaca
gccaacaggcagacaaagggggacaaaccaattgatcctgctgattccttgaggagcaac
acttcgtcacctctaaacctatcttccacttcatcaaaacactcccagagtagctcttac
actccaaacagcctcacgtctgaggatgcccatggcgatactcctctagacttgtcactg
cccaaacacatggcacagaagcgaccaaagccaaatggctttattaccgagcacaatggt
gaggtgtcggtacgtgaacagggttctggatctctagcgctggtcaagatcaagaaggag
gtcttggggtcggacagtggtgggagctctatccatcagctggagaaaagcaccagcccg
atttttgggattaatccctttgctggtggtcctgtgtacacctccttgccaccccacgga
gcttttcccccacccaccttcataagtcctgctcaggccaccatcccaggcctcaggccc
tacgccggtcttgaccccatgagcttcctgcctcacatggcctacacctatgccacaggg
gctgcaacgtttgcagaaatgcaacatagaagaaagtaccaacggaaagcaggtttccag
ggggagctgctggacgggacggcggactatctgtcaggcctggacgacctgacagacagc
gattcgctgctctccaggaagaagattaagaagactgaaagtggtatgtacgcgtgtgac
ttgtgcgacaaaacattccagaagaccagttccctcctaagacacaaatatgagcacaca
ggtaaacgtccacatcagtgtcagatctgtaagaaggccttcaaacacaaacaccacctc
atagagcactcacgcctgcactcaggggagaaaccctaccagtgtgacaagtgtgggaag
cgtttctcccattccggttcgtactcacagcacatgaaccatcgctactcctactgcaag
agggaggctgaggagcgcgaggcggccgagagggaggctaaggtgggagggctggctgga
ggtctggagcccaccgagttgctgatgagaagggcctatttgcaagggttggggcctctc
ggatactcagatcccgaggaacagccagaggacggcggtggtaccatcttaagggacgga
agagagggaggaggacgggaagtgggaggagtggacaataagatgtacgaggaggtgaca
gatggacaggaggcaagtttcaggaacagagaggaggagggtgacagcaggagccagatg
gactcaatgatggatgaagggggcaaagactcggcacagctgatggacacttgttcacga
gaagggaagacagacggaacgttggagcaggaggactga
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integrated database retrieval system
