Xiphophorus hellerii (green swordtail): 116723196 Help Entry 116723196         CDS       T07363                                  Symbol sympk Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe03015   mRNA surveillance pathway xhe04530   Tight junction Brite KEGG Orthology (KO) [BR:xhe00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     116723196 (sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     116723196 (sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:xhe03021]     116723196 (sympk)    03019 Messenger RNA biogenesis [BR:xhe03019]     116723196 (sympk) Transcription machinery [BR:xhe03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      116723196 (sympk) Messenger RNA biogenesis [BR:xhe03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      116723196 (sympk)     U7-dependent histone pre-mRNA processing factors      116723196 (sympk) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Cnd1 Adaptin_N PDS5 Motif Other DBs NCBI-GeneID:  116723196 NCBI-ProteinID:  XP_032423821 LinkDB All DBs Position 7:complement(31641530..31651157) Genome browser AA seq 1227 aa AA seqDB search MERPSKDGEPPAVIDVTTSEKVVELLNQAALIPADEKLTVLKQVQELIINKDPSLLDNFL DEIIAFQTDRSMEVRKFVIGFIEEACKRDNELLLRLIANLNLLLKDDSVNVVKKAILSLT QLYKVALQWLVRSRSVSEMQEACWDLVSQMTGDVLSMLDSENDGVRTHAIKFTESLIVTL SPRTPESDVPKRQEGDISLDKVPRDHPYIRYDALCDEGKAALDKLLKFMVHPAISSINLT TALGSLATIARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLKLHLVSVLKHPCS LEFQVQIGTLLLDLGMPQSEISRNTPLPREQRKRPRYEPAAEGKKVKMEPALIEDDEDKE EPVPLAAPKPAAAPTPQSAIDLTAEFLRPLLTSENVANLVLISMVYLPDVMPASFQATYT PVESAGTDAQIKHLARLMATQMTAAGIGPGLEQCKAREDESGKEEPAEDESGGKDVLIRR SLSSMVGQAISVVGGYSEKPPAPEAPAVKRLPEPILPSVQTKMAGAGGRKKVFRLADVVQ PLSDSQIGLLSSRAVKRILHSEKAVTQSGMSHVRVKLLSRLVTQFEGVMKEDVLDYVLED MRCRSDLAFSLLYQEYNSYLSQLPAGLLDGYDHCLYTLLSGLQEKPEQRDGLFTKLVLEA PIITESALDVIRRYCEDESRVYLGMTTLKELIVKRPSRQFQYLHVLLDLSSHEKEKVRST ALAFLKRMYEKDHLRDYIEKFALNYLQLLVHPNPPSLLFGADKDTEVAAPWTEETVRQCL FLYLSLLPLNHRLVHELASVYTEAIADIKRSVLRAIEQPIRGMGMNSPELLLLVENCPKG AETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVINGLEKNEVIQALPKLI KLNPIVVKEVFNRLLGTQHSEGSSSVSPLTPGDLLIALHNIDSTKCDMKSIIKATNLCFG EKNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIVKQVWKY PKVWEGFVKCCQRTKPQSYSVLLQLPPLQLASVFERCPEMRAPLLQHVLSFTPHQQAHIP NSVMAVLEAHKKLDPVPAEPVLEEEPAEPTVAQQPGPGPEPGPALQQETVLLRDEEEPME QEEAEPPTPETTDPIHQEPGQLKSGGTFLQEEEPKAAEEPEPEPGQEPLEEPMEEPEAEP SDQPEPLTAPEPEAAPPAAGSGSEDPE NT seq 3684 nt NT seq  +upstreamnt  +downstreamnt atggagcgtccttcaaaggacggggagcctcctgctgtcatcgacgtcaccaccagcgag aaggtggtggagctgctgaaccaggcggctctgatccccgcggatgaaaagctcactgtt ctcaaacaggttcaggaactcatcatcaacaaggatccgtctcttctggacaacttcctg gatgagatcatcgccttccagacggaccggtccatggaagtcaggaagtttgtgatcggg ttcatcgaggaagcctgcaaacgggacaacgagcttctgctgcggctcatcgccaacctg aacctgctgctgaaggacgacagcgtcaacgtggtgaagaaggccatcctgtccctgacg cagctctacaaggtcgccctgcagtggttggtccggtcccggtcggtgtcggagatgcag gaggcctgctgggacttggtgtcccagatgaccggagacgttctgagcatgctcgactcg gagaacgacggcgtccggacgcacgccatcaagttcaccgagtcactgatcgtcacgctg tcgccgcggacgcccgagtccgacgtccccaagagacaggaaggagacatcagcctggac aaggttcccagggaccacccctatatccgctacgatgctctgtgcgacgagggaaaggcg gcgctggacaagctgctgaagttcatggttcacccggccatttccagcatcaacctgaca accgcgctcggctccctagcaaccatcgctaggcaacggcccatgttcatgtctgaggtg gtgcaggcctacgagacgctgcacgccaacctgccccccaccttggccaagtcccaggtg agcagcgtgaggaaaaacctgaagctgcacctggtgtcagttctgaagcatccgtgcagc ctggagttccaggtccagatcggcacgctgctgctggacctgggcatgccgcagagcgag atcagccgcaacacgccgctgccgcgcgagcagaggaagcgcccgcgctacgagcccgcc gccgagggcaagaaggtcaagatggagccggcgctcatcgaagatgacgaggacaaagag gagccggtgccgctcgccgccccgaagccggcggccgccccgactccacagtcggccatc gacctgacggccgagttcctgcgacccctgctgacctcagagaacgttgccaacctggtt ctcatcagcatggtgtacctgccggacgtcatgccggcgtccttccaggccacctacaca cctgtggagtcggccggaaccgacgcccagatcaaacacctggcccggctgatggcgacc cagatgacagcggccgggatcggaccaggtctggagcagtgcaaggcgcgggaggacgag tcggggaaggaggagccggcggaggacgagtcgggagggaaggacgtcctgatcaggcgg tcgctgtcctccatggtgggccaggccatctccgtggtgggcggctacagcgagaagccg cccgcccccgaggcgcccgccgtcaagaggcttcctgagcccatcctgccctccgtccag accaagatggcgggtgccggcggcaggaagaaggtgttccgcctggcggacgtggttcag ccgctgtccgactcgcagattggattgctgtcctccagagccgtgaagcgcatcctgcac tcggagaaggcggtcacccagagcggcatgtcccacgtcagggtgaagctgctgtcccgg ttggtgacccagttcgagggcgtgatgaaggaggacgtcctggactacgtcctggaggac atgcgttgccgtagcgacctggccttctctctgctgtaccaggagtacaatagctacctg agccagctgccggccggcctgctggacggatacgaccactgcctctacacgctgctgtcc gggctgcaggagaaacccgagcagagggacgggctcttcaccaagctggttctggaagct cccatcatcaccgagtcggcgctggatgtgatccgccgctactgtgaggacgagtcccgg gtttatctgggcatgacgacgctgaaggagctgatcgtcaagaggccgtccaggcagttc cagtacctccatgttctgctggacctcagctcccacgaaaaagagaaggtccgcagcaca gcgctggccttcctgaagcggatgtatgagaaggatcacctgagggactacatcgagaag tttgccctgaactacctgcagctcctggttcacccgaacccgccctcgctgctgttcggc gccgacaaggacacggaggttgctgctccgtggacggaggagacggtgagacagtgtctc ttcctctacctgtccctccttcctctgaaccaccggctggtccatgagctggcgtctgtc tacaccgaggccatcgccgacatcaagcgcagcgtgctgcgcgccatcgagcagccgatc cgcgggatggggatgaactctccagagctgcttcttctggttgaaaactgtcctaaaggg gcggagactctggtcactcgctgtctgcacattctgaccgataaagtgcctccgtcgccg gagctggtggagcgggtccgggacctctaccacaagcgtgttccggacgtccgcttcctg atcccggtcatcaacggcctggagaagaatgaagtcatccaggctctgccgaagctcatc aagctcaacccgatcgtcgtgaaggaagtcttcaaccggctgctgggaactcagcacagt gagggaagctcttcggtttctccgctgactccaggagatctgctcatcgccttgcacaac atcgactcaacaaagtgcgacatgaaatccatcatcaaagccaccaacctgtgcttcggg gagaagaacgtctacacgtcggaggttctggcggtggtgatgcagcagctgatggagcag aacccgctgcccatgctgctgatgcgcaccgtcatccagtccctcactatgtacccgcgc ctgggcggcttcgtcatgaacatcctgtcccgcctcatcgtcaagcaggtgtggaagtac cccaaggtgtgggagggcttcgtgaagtgctgccagcggaccaagccgcagtcctacagc gttctgctgcagctgccgccgctgcagctggccagcgtgttcgagcgctgcccggagatg agggcgccgctgctgcagcacgtcctttccttcacgccgcatcagcaagctcacatcccg aactccgtcatggcggtgctggaggcccacaagaagctcgacccggtgccagcggagccg gttctggaggaggaaccggcagaaccaactgtcgcacagcaaccaggacccggaccagaa ccaggaccggcgctacagcaggaaacagttctgctgagggacgaagaagaaccgatggaa caggaagaggcggagccaccgacacctgagacgaccgacccgattcaccaggaacctggt cagttaaagtctggaggaactttcctgcaggaggaagagccgaaagccgcagaggaacca gaaccagaaccgggccaggagccattggaggaaccgatggaggagcctgaagccgagccg tcggatcagccggaaccgctcacggctccggaaccggaggcggcaccgcctgcagctgga agcgggtcggaggacccagagtag

DBGET integrated database retrieval system