Xiphophorus hellerii (green swordtail): 116723212
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Entry
116723212 CDS
T07363
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4-like
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03410
Base excision repair
xhe04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116723212
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116723212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhe03032
]
116723212
03036 Chromosome and associated proteins [BR:
xhe03036
]
116723212
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116723212
Enzymes [BR:
xhe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
116723212
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116723212
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116723212
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116723212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VWA
VIT_2
BRCT
BRCT_2
VWA_2
TniB
DDE_Tnp_2
Motif
Other DBs
NCBI-GeneID:
116723212
NCBI-ProteinID:
XP_032423848
LinkDB
All DBs
Position
7:complement(28099053..28143753)
Genome browser
AA seq
1769 aa
AA seq
DB search
MGVFDNCSVLLELKNLPFKEKKKLKSIVTLNGGSISFIVNKQCSLVVTSDLSNLSSNRLR
SIQKNQTPVVGFDYLYKCVERGVLLSLDEYKMDTSSSLDPPPPWKSPQRAPLTYKGPTSS
EGPAVEKNNQKFRIYKESDSALPAFPDDFQVAKYSVFGQENGSRFCVLELQSAKGEQGRR
YRVARYLKDDVVSKKTAVMDRLVFLSTSEEALDVYKVLSEELDRSELQRMSSLPAEAPHL
GSAPLQQLLLEEKLNSDELSPDVAAFVELLWTEALGCLGNILRVPISRLSLNDVSRAEGL
LLQAQRKLKEGNKEEASSLLDEVFTLLPHREPRPQSPTARFLSQKLDLCQLIRDVLNVSE
MTLNDPKPSSVGKYRALRCHIEAIPRSSSVFQNVAALLADGSVQIQQIMRVNRAVELQTF
QSEIGNVKPLLHSSSPSNFVGIMSRGLLLPHVGVEHHGITRTDVGNLGSGIYFGDALSTS
LKYAKPSETDGSRLLLVCDVALGVSKDLYKRDQTLTEAPEGYHSVHGVRRTNKTTSDFED
DEYVVYSIDQVKIKYVVQFRKEGDKQKTFSPDINLTAEPIESAKNPGLTSEHVEEDLENV
KNPLEDVKAGLLDSSGQQLPLQAVHVKCKLMDLLSQVIIFQKYTNQSSVPIEAKYVFPLD
DSAAVCGFEAFINGKHVVGEVKEKETARKEYKQAIAKGHGAYLMDQDAPDVFTISVGNLP
PGATVLIKVTFVSELVVRDGSILFSLPGSVAPWQESAALNQTTQVSVEKVCVANESAREF
TLDMSVEMPFEISSLTCITHQVKIKRTDCKAVISVLPGQVMGSDGFQMSVTLSEVHLPRM
WVEKHPDKDSQACMLVFYPNFEFDSSSEGSEVVLLLDTSESMKGESFQLAQKIALQVLKN
LKNDIKINIVLFGTDHTEAFLTTQKLNEVQAEAKKFIKSCSSVGGSTELWLPLRALSLLP
PSDGVRNLLLLSDGHIQNAAATLQLLRDNVQHSRLFTCGFSSTANRHMLRALAQAGGGAY
EFFDSKAKYTWAEKVERQVKRMSSPGCSSVSVKWQQFNPRAPPVQAPKQLNALFNDCHTL
VYGFVPHCTQATLLGDLRGQELQTMVSTTELQKTRGTFLHKLTARALIRDYEDGNLDITE
AEHEGKKAELKSFIIDLSKEFSILSQFTSFVAIEERDSEKADDGVTDIPKLVAEEDVDFL
PYINWSLPEDKEKVVVCDAELSEESDRDMMPAELCSTEEIYDDLYAPDMSLCDMLSAELC
STVEIYDDLYAPDMGLCDRVYGEDLCNRLPPKKKKLLLQAPEESERERREIPQRNLRVCS
IASYLEAPEESEDERSRELQEEAPEESLRERCRKLREERNLGLCSIASYLEKSEELNDEA
PEESLRRRREIPQRNLGVCYIEPHCEKSEELNDEAPEESLRRRSRELKKSDFSLRRRSRK
LKVKVQGITNFLSSEEMDVDRSRKLQRRAIPQKFEEINDERSRELLEEVQTFTHLSTSEE
SEDDSSEEMDDERSEETERSWKLQEKPLELIKKACKYHRSTETQAPIPLMGMSVAPGSSI
LWPPSARVSEAPLRRRRALLSNLMDGLVCQAYDIQPHHPSFEAPDPEEQKLKWIKIFQLQ
QADGYWELTVELGKLVNVNVDAFANVFLKNKGIHSLGAKANAGIRRLVATLLVLQLMREE
ELEEGKLLQSLFNLKEPTGSRSERWQQVKKAVDWVRWADREYPCACSRLEFGWSWESSTR
QLLGFERFPPFSPLISLELQKTAAPLAIH
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtttgacaactgttcagttcttctggagctcaaaaacttgcctttcaaggag
aagaagaagctgaaatcaatagtgacattgaatggaggcagcatttctttcatagtcaac
aaacagtgctctctggtggtgacctccgacttgtccaacctgagctccaacaggctgcgc
agcatccagaagaaccagacgccggtggtcggctttgattatctgtataaatgtgtggag
agaggcgttcttctgtctttggacgagtacaagatggacacttcatcatctctagatcct
cctcctccctggaagtcaccgcagagagctccactaacttataaaggtccgacctcatca
gagggaccagctgttgaaaaaaacaatcagaagttcagaatctacaaagagtcggattct
gctctcccagcattccccgatgatttccaggtggcgaagtactccgttttcggacaggag
aacggcagcaggttttgcgtgttggagctgcagagcgccaaaggtgagcagggacggcgc
tatcgtgtggccagatacctgaaggacgacgtggtgtcgaagaagacagctgtgatggat
cggctggtgttcctgtccacttcagaagaagctctggacgtttacaaggtgctgagtgaa
gaactggatcgctctgagctgcagaggatgagcagcttacctgctgaggcgccacacctg
ggctctgctcccctgcagcagctgctgctggaggagaaactgaactccgatgagttgtcc
ccagacgtggcggcgtttgtggagctgctgtggactgaagctctcggttgccttggaaac
atcctcagagtccccatctccagactcagcctgaacgatgtgagcagagctgaaggcctt
ctgcttcaggcgcagaggaaactgaaggagggaaacaaggaagaggcgtcatccctcctg
gacgaggttttcaccctgctgcctcaccgggaacccagacctcagtcacctacagccagg
tttctgtctcagaagctggatctctgtcagttaatccgggatgttctgaatgtgagcgag
atgaccttgaacgacccgaagccgtcctccgtggggaagtaccgcgctcttcgctgccac
atcgaagccattccccgcagcagctcagtgtttcagaacgtcgccgccctgctggctgac
gggtcggtgcagatccagcagatcatgcgggtcaacagagcggtggagcttcaaacgttt
cagagcgagatcgggaacgttaaacccctcctccattcatccagccccagcaactttgta
ggaatcatgtccagaggtctgctgcttccccatgtgggagtggagcatcatgggattacg
agaacggacgtcgggaaccttggcagcgggatttacttcggtgatgctttgagcaccagt
ctgaagtacgccaaacccagtgaaacagacggatcgcgcctcctgctggtctgcgatgtg
gctctgggggttagtaaggatctctataagagagaccagactctgaccgaggctcctgaa
ggctaccacagcgttcacggagtcagacgaaccaacaaaactacatctgattttgaggat
gacgagtatgtggtttactctattgaccaagtgaagataaaatatgtagttcagttcaga
aaggaaggagacaagcagaagactttcagtccggacatcaacctgactgcagaacccatt
gagtctgccaagaacccaggtctcacttcagaacatgtagaagaagatctagaaaatgtg
aagaaccctctggaggacgttaaagctggactgttggacagttcaggccagcagctcccc
ctgcaggccgtccatgtaaagtgcaaactgatggatctgctctcccaggtcatcatcttc
cagaaatacaccaatcagagctcagtgcccattgaggcgaagtacgtcttcccgctggac
gactcagctgccgtgtgcggatttgaagctttcatcaatgggaagcacgtggtgggagag
gtgaaggagaaggagacggctcgtaaggagtacaaacaggcgatagccaaaggccacgga
gcgtacctcatggaccaggacgctcctgatgtgttcaccatcagcgtgggcaacctgccg
cccggtgccactgtcctcattaaggtgacctttgtgtcagagctggtggtcagagacggg
agcatcctgttctccctgccgggtagcgtggctccatggcaggaaagcgccgcgctcaac
cagaccacacaagtctctgtggaaaaggtttgtgtggccaacgaatcagcgagagagttt
acgttggacatgtcggtggagatgccctttgagatctctagcctgacctgcatcacccat
caagtcaaaattaagaggactgactgtaaggcagtgatcagtgttctgccgggtcaggtc
atggggtcagatggtttccagatgtctgtcactctctctgaggttcatcttcccagaatg
tgggtggagaaacacccagacaaggacagccaggcctgcatgctggttttctacccaaac
tttgagtttgactccagctctgaaggcagtgaagttgttctcttgctggacacgtctgag
tccatgaagggggaatcgttccagctggcccagaaaattgccctgcaggttttaaagaac
ctgaagaacgacatcaaaatcaacatcgttttgtttggaacagatcacacagaagctttc
ctgacgacccagaaactcaacgaggttcaagctgaagccaagaagttcatcaagagctgc
tcctcagtagggggcagcactgagctgtggctgcctctccgggctcttagcctgctgccg
ccgtccgacggcgtgcgaaacctgctgctgctgtcggacggccacatccagaacgcggcg
gccacgctgcagctgctcagagataacgtccagcacagtcgcctcttcacctgcggcttc
agctccacagccaatcgccacatgttgagagccctggctcaggcagggggcggagcttat
gagttttttgactctaaagcgaagtacacttgggctgagaaggtggagcgccaggtgaag
cgcatgtcgtctcccggctgcagctccgtctctgtgaaatggcagcagttcaaccccaga
gctcctccggttcaagccccgaaacagctgaacgctctgttcaacgactgccacacgctg
gtttacggctttgtgccccactgcactcaggcgactcttcttggagatttgcgtggtcag
gagcttcaaaccatggtgtcaacaacagagctgcagaagaccagaggaacgtttcttcat
aagctcacagcaagagccctgatcagagactacgaggatggaaaccttgatatcaccgaa
gctgagcacgagggtaaaaaagcagagctgaagtccttcatcatcgatctgagcaaagag
ttctccatactgtctcagttcactagcttcgtggccatcgaagagagggattctgagaag
gcagatgatggcgtcacagacatcccaaagctggtcgcagaggaggatgtggacttcttg
ccatacatcaactggagtcttcctgaggacaaagaaaaagttgtggtttgtgatgcagag
ttatctgaagaaagcgatcgcgacatgatgcccgcagaactttgctccactgaagagata
tatgacgacctctatgcacctgatatgagcttgtgcgatatgctgtccgcagaactttgc
tccactgttgagatatatgacgacctctatgcacctgatatgggcttgtgcgatagggtc
tatggtgaagatttgtgcaacagattacctcctaagaaaaagaaacttctgctccaggca
cctgaagagagcgagcgcgaaagacgtgagatcccccagaggaaccttcgtgtatgttcc
attgcatcatatcttgaggcacctgaagagagcgaggacgaaagatctagggaactccag
gaagaagcacctgaagagagcttgcgcgaaagatgtaggaaactccgggaagaaaggaac
cttggtttatgttccattgcatcatatcttgagaaatctgaagagttaaatgacgaagca
cctgaagagagcttgcgccgtagacgtgagatcccccagaggaaccttggtgtatgttac
attgaaccacattgtgagaaatctgaagagttaaatgacgaagcacctgaagagagcttg
cgccgtagatctagggaactcaagaaatctgattttagcttgcgccgtagatctaggaaa
ctcaaggtcaaagtacaaggcatcacaaattttttgtcatctgaagagatggatgttgat
agatctaggaaactccagagacgtgcgatcccccagaaatttgaagagataaatgacgaa
agatctagggaactcctggaagaagtacaaaccttcacacatttatcgacatctgaagag
agcgaggacgattcatctgaagagatggatgacgaaagatctgaagagactgagagatct
tggaaactccaggagaaacctctagagttaataaagaaagcttgtaagtaccacaggagc
acagagacacaggccccgatcccactgatgggtatgtctgttgctcccgggtcctccata
ctttggcctccatctgcaagggtcagtgaagctccactacgtcgtcgtcgtgcattactt
tcaaatctaatggatggtctggtttgtcaagcatatgatatacagccacatcatccatcc
tttgaagctccagacccagaagagcagaagctgaagtggattaagatcttccaactgcag
caggcggacggatactgggagttaactgttgagctgggaaaactggtcaatgtcaacgtg
gatgcgtttgctaacgtgttcctgaagaacaaaggcattcattctctgggtgcgaaggcc
aatgcaggcatccggaggctggtggcgactctgttggttctgcagctgatgagggaggag
gagctggaggaaggaaaactcctgcagagtttgtttaacctgaaggagccgactgggtcc
aggtctgagcgctggcagcaggtgaagaaggcagtggactgggtgcgttgggccgaccgg
gagtatccgtgcgcctgcagccggctggagttcggctggagctgggagtcttccacccgc
cagctgctgggcttcgaacgcttccccccgttctcaccgctcatcagcctggagctgcag
aagaccgcagcgccgctggccatccactga
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integrated database retrieval system
