Xiphophorus hellerii (green swordtail): 116723234
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Entry
116723234 CDS
T07363
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
xhe04514
Cell adhesion molecules
xhe04672
Intestinal immune network for IgA production
xhe04810
Regulation of actin cytoskeleton
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116723234 (itga4)
04514 Cell adhesion molecules
116723234 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116723234 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116723234 (itga4)
04810 Regulation of actin cytoskeleton
116723234 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116723234 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116723234 (itga4)
04515 Cell adhesion molecules [BR:
xhe04515
]
116723234 (itga4)
04090 CD molecules [BR:
xhe04090
]
116723234 (itga4)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116723234 (itga4)
Exosomal proteins of other cancer cells
116723234 (itga4)
Cell adhesion molecules [BR:
xhe04515
]
Integrins
Integrin alpha subunits
116723234 (itga4)
CD molecules [BR:
xhe04090
]
Proteins
116723234 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
FG-GAP_2
DUF11
Integrin_alpha
FixS
Motif
Other DBs
NCBI-GeneID:
116723234
NCBI-ProteinID:
XP_032423874
LinkDB
All DBs
Position
7:complement(9632944..9653922)
Genome browser
AA seq
1020 aa
AA seq
DB search
MGIVFCLVPVQVLVLVLVCPAAGYNLDQEHSMVFNGPHSSMFGYSVLLHRHSSEKWLLVG
APVANSSHQPTQSPGAVFRCNIMDEKRRCNRLSADILSCGKTCEPESDHQWLGVSLSRQP
GENGGRVLACAHRWKNVYYSRKDGQNNKLPNGVCFRYESDLTSYQHFIPCYKDHQRKFGE
DYGSCQAGISNFLTQDLIIVGAPGSSYWTGSVVVYNTSSNSMSVYQDDETGAVSYGSYLG
YAVGAGHFQSPSSIEVVGGAPQYNQKGKAFIFSTENSKMLTVVSEVAGNELGSYFGSSVC
VVDLNADGLSDLLVGAPMATGTSREEGRVHVYINEGEAQLKEAEFKLTGSDAYAARFGQT
IADLGDLDDDGYPDVAVGAPQEDDLKGAVYIYNGRKEGISPKPSQRITGSSLGHDLKMFG
QSLNSGIDIDDNGYNDVAVGAFLSDSAVVLRTRPVVQVKASLILPEQIDQMGAQCQDHKT
QTVCFNVTICFSVTFKHHRGAIELQYNLTSDLLHKPSFPHRFYFHGNGSSNSTRGHMKAR
HGHPSCATHVAYQRKDVKDIYTPVQFEVSYGLSEKRSHKTPSRKLASIKPILQHSAGHHN
TITNQTRFARSCSMVNCSTNMQLSSELVLPQQQKFFALGSGQIILKTSLMNSGDDAFLPR
MTLRFPNNIHYIKVLHNQGNMISCDVTEEVNTTDVRVDCRITSLVLPALSQMNISFLLDV
SQNSTPGDIHININTSSDNYEMDEFLRDNSMTLVLPLKHGVGVSIHGFVTPKSFVFGDED
LIPADCYPEKFNYTFKVLNFGPSKALNTVVQIALPKILAPYPHRLLQLIDWKSSHGSCSI
SDKTISVSEDCNVPQASFIKQIIFFFSPTTTRTMFCGRVDNLCEHLVCRLGNLDAGRDAT
IQLEISLNPAVLLQAPGRHHVMKLESTANVLSPREDAHTVLIKDQPALVVVEAVFTQKPS
MAVKIFIIAVSLVLGLIILTALIWCLYKCGFFKRNFKKQEELNRDSWDYVPKLNKRESST
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgtcttctgcctggttccagtccaggttctggttctggttctggtctgtcct
gcggcaggttataatctggatcaggagcacagcatggtgttcaacggtcctcactcctcg
atgtttggatactctgtgctgctgcatcgccacagctctgaaaaatggctgctggtcgga
gctccagtggctaactcctcccatcagccgactcaatctccaggagccgtttttcgctgc
aacattatggatgagaagcgcagatgcaatcgtctttctgctgacattttaagttgtggg
aagacgtgtgaaccagagagtgatcaccagtggctgggtgttagtttgtccagacaaccc
ggagaaaatggtggacgtgtcctggcatgtgctcatcgctggaagaacgtgtattactca
aggaaagacggccagaacaacaagcttcctaatggcgtctgttttcgttatgagagtgac
ctgacctcctaccagcactttatcccttgctacaaagaccaccagaggaagtttggtgag
gattacgggtcatgtcaggcgggcatttccaatttcttgacacaggatctgatcatcgta
ggagcaccagggtcttcttactggacgggctcagttgtggtctacaacacctccagcaat
tcgatgtcggtgtatcaggatgacgagacaggagctgtcagctatgggagctacctgggt
tacgccgttggagccggtcacttccagagtccctcttccatagaggtggtgggtggagct
ccacagtacaatcagaagggcaaggccttcatcttctcaacagagaacagcaaaatgctg
acggtggtttcagaagttgctggaaatgaactggggtcttatttcggctccagtgtttgt
gtggtggatctgaatgctgatggtttgtcggatctgctggttggtgctcccatggcaacg
gggacctccagggaagagggaagagttcatgtgtacattaatgagggggaggctcagctg
aaggaggcggagtttaagctgactggcagcgatgcttatgcggcacggtttggacagacc
attgctgaccttggagacctggatgatgatggttatccagatgtggctgttggcgctcca
caggaagacgacctcaaaggcgccgtctacatctacaatggcaggaaggagggtatttca
ccaaaaccatcacagaggattacagggtcgtccctgggtcatgacctgaagatgtttgga
cagtcgctgaactctgggattgacatcgacgataacggctacaatgacgtggcagtggga
gcattcctttcagactcagctgtggttctcaggacccgtccagtggttcaagtgaaagct
tctctgattctgcctgagcagattgatcagatgggggcgcaatgccaagatcacaagact
cagactgtctgcttcaacgttacgatctgcttcagtgtcacatttaaacaccacagaggg
gcaatagagcttcagtataatttgacctccgacctcctccataaaccatcgttccctcat
cgtttctatttccacggtaacgggtcatcgaacagcacgaggggtcatatgaaggcacga
cacggccatcccagctgtgcaacacatgtggcttaccaaaggaaagacgtaaaagacatc
tacactccagttcagtttgaagtttcctatggcctcagtgaaaagaggagccacaaaacc
ccatccagaaaattagcatccataaaacccattctgcagcacagcgcaggacatcataac
accatcaccaatcagactcggtttgctcgctcctgctctatggtgaactgttcgaccaac
atgcagctgtcaagtgaactagtgctgccgcaacagcagaagttcttcgcgctcggttcg
ggacagatcatcctgaaaacctccctgatgaactctggagatgatgccttcctgcctcga
atgacattgagattcccaaacaacatccactacatcaaagtgctgcataatcagggcaac
atgattagttgtgatgtcactgaggaagtgaacactacagacgtgagggtggactgcaga
atcacaagcctcgtcctcccagccctctctcagatgaatatcagttttctgttggatgtc
agtcagaacagcacgcctggcgacattcacattaacatcaacaccagcagtgacaattac
gagatggatgagtttctccgagataacagcatgactcttgttcttcctctgaaacatgga
gttggtgtcagcatccacggttttgtgactccaaagtcttttgtgtttggcgatgaagac
ttgattccagctgattgctaccctgaaaaattcaactacacatttaaggtgttaaacttt
ggacccagcaaggcgttaaacacagtggttcagattgcactgccaaaaatcctggcaccg
tacccacacagactgcttcagctcatcgactggaagtcatcacatggttcgtgctcaata
agtgacaaaacgatttcagtcagtgaggactgcaacgttccccaggcttcattcatcaaa
cagatcattttcttcttctctcccaccaccacccgcacaatgttctgtggccgtgtcgat
aatctgtgtgagcacctggtgtgtcgtcttggtaacctggatgcgggcagagatgctacc
atccagctggaaatcagcctgaatcctgctgtgctgctgcaagcaccgggccgtcatcat
gttatgaagttggagagcacagcaaacgtgttgtcgcccagagaagatgctcacactgtc
ctaatcaaggatcaacctgcactggtggtggtggaagctgtttttactcagaaaccctca
atggctgtgaagattttcattatcgccgtcagtttagttttaggactgatcatcttgact
gctctcatctggtgtttgtataagtgtggcttctttaagaggaacttcaagaagcaggaa
gagttaaatagagacagctgggactacgttcccaaactcaacaagagggagagctctact
taa
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integrated database retrieval system
