Xiphophorus hellerii (green swordtail): 116723265
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Entry
116723265 CDS
T07363
Symbol
clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116723265 (clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116723265 (clasp1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116723265 (clasp1)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
116723265 (clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
Adaptin_N
Sec7-like_HUS
ParcG
MMS19_N
MMS19_C
HEAT_DAAF5
TAN
Motif
Other DBs
NCBI-GeneID:
116723265
NCBI-ProteinID:
XP_032423919
LinkDB
All DBs
Position
7:32306268..32363053
Genome browser
AA seq
1582 aa
AA seq
DB search
MEPSVESCLAQVLQKDVGRRLQVGQEVIDYILDRNKSPELEQDQTALDKMVDAIASSWVN
SSNFKVNLLGLDLLSALVTRLQDRFRTHIGTVLPSLMDRLGDARDQVREQDQVLLLKIME
HAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNTSGAHGLTLSKIVPHICSLLGDPV
AQVRDSAMSCLVEIYRHVGERVRLDLSKKGLPQSRLNVIFSRFDEVQRSGNMMQSSGSDK
NFEDEDSVDGGRSSSSSSSKAPPSGRRAVVSSVRRPSSASSTKSTGKEAAAGAVDEDDFV
KAFEDVPPVQFYSNRELEDQLTKIRDVLSDDKHDWEQRVVALKKVRSLVLAGAPDHEGFP
YQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSVLRNKFDHGAESVMPTLLNLVPNSAK
VMATSGAAAIRLILRHTHYPRLIPIITSNCSSKSVAVRRRCYEFLDLLLQEWHTSTLERH
VAVLTETVRKGIHDADSEARSIARKCYWGFHGHYSREAELLFQALEATYQKALQSHLKSS
DSIMSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLAGSRTSAAPGSLQRSRSDIDV
NAASSAKSRLGGVPASSPFSAAAALPPGSYASLDGAAGKSDGRVRTRRQSSGSVGGASPS
VVDSRGRSRAKVVSQSQRSSSANPISAGSRSSSPGKLLGQSYGRLPRAAAPPSTAAERRS
RIPRSQGCSRETSPSRPGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFAPLASRRHS
RSTSALSSVEPHGQSDRYGLIHQARICASVNAMRVLNTGTEVEAAVADALLLGDSRNKRK
PLRRRYESPGMYSDDDANSDASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHCASSNWS
ERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVTVHKD
DLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPFDQQFNILMRFIVDQTQTP
NLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIAL
FELNTPEFTMLLGALPKTFQDGATKLLHSHLKNSSNTSSGVGSPSNTVGRTAPRHAPSRS
SPLTSPTNCSHGGLSPSGLWGWGVDGLLPAAPPAAPGLRALRRAFSPSSVTEYDTENMNA
EEIYSSLRGVTEAIQSFSYRSQEDLKEPLRRDGKRDDGVGREVVAPSPGPDGRLGSDVVE
GGRTALDNKTSLLNTPSPRSFSGPRSREFAPYGYGETICAYDKSALKEAVFDDDVEQFRD
CRQKDSGENKTSLPKGFCPVGPDHSDLVADLLKELSNHNERSEERRAALLELLKVTREDS
APVWDEHFKTVLLLLLETLCDKDHAIRALALRVLKEILRNQPTRFRNYAELTIMKTLEAH
KDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIAKD
SLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYAVIGEELKPHLAQLTGSKMKLLNL
YIKRAQTTNSNSSSSSDVSSHS
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcgtggagagctgcttggcgcaggtcctgcagaaggacgtgggccggcgg
ctgcaggtaggacaggaagtcattgactacatcctggacaggaacaagtcccccgaactg
gagcaggaccagacggcgctggacaagatggtggacgccatcgccagctcctgggtcaac
tccagcaacttcaaggtgaacctgctgggcctggacctcctgtcggctctggtgacccgg
ctccaggaccggttcagaacccacatcggaacggttctgccgagcctgatggaccggctg
ggagacgccagggaccaggtgagggagcaggaccaggtcctgctgctgaagatcatggag
cacgccgcctcccctcagtacgtctgggaccggatgctgggaggcttcaagcataagaac
aaccggaccagagagggagtgtgcctgtgtctcatcgccacgctgaacacgtccggagcc
cacggcctgacgctgagcaagatcgtcccccacatctgcagcctgctgggagaccccgtg
gcccaggtccgggacagcgccatgagctgcctggtggagatctaccgccatgttggggag
cgggtgaggctggacctcagcaagaagggtcttccccagtcacggttgaacgtcatcttc
agcaggtttgatgaagtccagagatccgggaacatgatgcagtcttctggttctgataaa
aactttgaggatgaagactctgtggacggaggccggtcctcttcgtcgtcctcctccaag
gcgcctcctagtggacggagggcggtggtgagctctgtgagaaggcccagttctgcttcg
tccaccaagtccacaggaaaggaggcggctgccggagccgttgatgaagacgactttgtg
aaggcgtttgaggacgtcccaccagtccagttctactccaacagggagctggaggaccag
ctgaccaagatccgagatgttctgtctgacgacaagcacgactgggaacagcgcgtggtg
gcgctcaagaaggtccgttctcttgtcctggccggagcgccggaccacgaaggcttcccg
taccaactgcggctgctggaggcgccgctgaagctgtcagccaaagacctgcgctcccag
gtggtccgagaagcctgcatcacgctgggacatctgtcctccgtcctgcggaacaagttt
gaccacggagcggagagcgtgatgccgaccctgctcaacctggtaccaaacagcgccaag
gtcatggccacgtccggagcggccgccatccgcctcatcctcaggcacacccactaccct
cgcctcatccccatcatcaccagcaactgcagctccaagtctgtggctgtcaggaggcgc
tgctatgagttcctggacctcctgctgcaggagtggcacacgtcgaccctggagagacac
gtggccgtcctcaccgagaccgtccggaagggaatccacgacgccgactccgaggcccgc
tccatcgccaggaagtgctactggggtttccatggccactacagccgggaggcggagctt
ctgttccaggcgctggaggccacctatcagaaggcgctgcagtcgcacctgaagagctct
gacagcatcatgtcgctgccgcagtccgaccgctcctcctcatcctcgcaggagagcctc
aaccgacctctgtctgtgaagagcgtcatcggaggcagcatcaccagaagtaagctggcg
ggctccaggacgtcggccgcaccgggttccctgcagcgttcccgtagcgacatcgatgtc
aatgccgcctccagcgctaagtcccgcctgggaggcgtcccggcctcctcgccgttcagc
gccgccgccgccctgcccccggggtcctacgcctcgctagacggcgctgctggtaagagt
gacggtcgtgttcgtacgagaagacagagctccggcagcgtgggcggagccagtccgtca
gtagtggacagcagggggcggagtcgagccaaagtggtctcccagtcgcagcgatccagt
tcggccaatcccatcagcgccggcagtcgctccagttccccagggaagctgctgggccag
agctacggccgcctcccccgagccgcggcgccgcccagcaccgccgcagagagacgcagc
agaatcccccgcagccagggctgcagccgcgagaccagccccagcaggccgggcctggcc
cggagccgcatcccgcgccccagcatgagtcagggctgcagccgcgacaccagtcgcgag
agcagccgcgacaccagccccgctcggggcttcgctcctctggcctccagacgccactcc
cgttccaccagcgctttgtcctctgtagaaccccacggccagtcagatcgatacggtctg
atccaccaagccaggatttgtgcgtcggtgaacgccatgcgggtcctgaacaccggcacc
gaggtggaggcggccgtggccgacgctctgctgctgggagactccaggaacaagaggaag
ccattgcggcggcgctacgagtctcctgggatgtattctgatgacgacgccaacagcgac
gcgtccagcgcctgctcagagcgctcctacagctccaggaacggaggcatcccccactac
ctgcggcagacggaggacgttgccgaggtgctgaaccactgcgccagctccaactggtcc
gagaggaaggagggcctgctgggcctgcagaacctgctgaagagccaaaggatcctcagc
cgggtggagctgaagagactctgtgagatcttcaccaggatgtttgcagacccccacagt
aagagagtgttcagcatgttcctggagacgctggtggacttcgtcacggtacacaaggac
gacctgcaggactggctcttcgtcctgctcactcagctgctgaagaagatgggcgccgac
ctgctaggctcggtccaggccaaggtccagaaggctctggatgtcaccagggagtcgttc
cccttcgaccagcagttcaacatcctgatgcgcttcatcgtggaccagacccagaccccc
aacctcaaggtcaaggtcgccatcctgaagtacattgagtctctggctcgccagatggac
ccgaccgactttgtgaactccagcgagacgcggctggcggtgtcccgcatcattacctgg
accaccgaacctaaaagctccgacgtcaggaaggcggcccaggtggttttgatcgcactg
tttgagctgaacacgccggagttcaccatgctgctgggcgcgctgcccaagaccttccag
gacggcgccaccaagctgctgcacagccacctcaagaactccagcaacaccagcagcggc
gtggggtctcccagcaacacggtgggccggacggcgccgcgccacgcccccagcaggtcc
agtcctctcacttcccccaccaactgctcccacggtggcctatctcccagtggtttgtgg
ggttggggggtcgacgggctgctccctgctgcgccccccgccgcccccggcctcagggcc
ctgcgccgagccttttcacccagcagcgtgacggagtacgacacggagaacatgaacgca
gaggagatctacagctcgctgcgcggcgtcaccgaggccatccagagcttcagctaccgc
agccaggaggacctgaaagagccgctgcgccgtgacggcaagagggacgacggcgtggga
agagaagtcgtggctccgtctccaggtcctgatggtcgtctgggttcagacgtggtggaa
ggcggccgcaccgccctggataacaagacgtcgctgctcaacaccccgtcgccacggtcc
ttctccgggccccggagccgcgagtttgccccctacggctacggggaaaccatctgcgcc
tacgataagagcgcgctgaaggaggccgtgttcgatgacgacgtggagcagttccgtgac
tgccggcagaaggattcgggtgaaaacaagacaagtctccctaaaggcttttgtcctgtc
ggaccggaccattcggacctggtggcggacctgctgaaggagctgtccaatcacaacgag
cgcagcgaggagcggcgcgcggcgctgctggagctgctgaaggtcacgcgggaggacagc
gcccccgtgtgggacgaacacttcaagaccgtcctgctgctgctgctggagacgctctgc
gacaaggaccacgccatccgggccctggccctgcgggttctgaaggagatcctgaggaac
cagccgacccggttcaggaattacgccgagctgaccatcatgaagaccctggaggcccac
aaggactcccacaaagaggtggtgcgtgcggccgaggaggcggcgtccacgctggccggc
tccatccacccggagcagtgcatcaaggtgctgtgccccatcgtccagaccgccgactac
cccatcaacctggccgccatcaagatgcagaccaaggtcatcgaacgcatcgccaaggac
tcactgctgcagctgctgcccgacatcatccccggcctgctgcagggttatgacaacaca
gagagcagcgttcgcaaggccagcgtgttctgcctggtggccatctacgctgtgattgga
gaggagctgaagccacacctggcacagctgacaggcagcaagatgaagcttctgaacctc
tacatcaagcgggcccagaccaccaacagcaacagcagcagctcctccgacgtttcctct
cacagttaa
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integrated database retrieval system
