Xiphophorus hellerii (green swordtail): 116723329
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Entry
116723329 CDS
T07363
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116723329
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhe03009
]
116723329
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116723329
Ribosome biogenesis [BR:
xhe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116723329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
116723329
NCBI-ProteinID:
XP_032424032
LinkDB
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Position
7:complement(929849..958236)
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AA seq
850 aa
AA seq
DB search
MAAVQEPEVQLAQRLASNEKAVRIKAMKKLRKYISARSLRASGGFTGDELLKLWKGLFYC
LWMQDKALLQEELSNQISTLIHNFHDLDKQLMYLESFLQTMKREWTGIDRLRMDKFYQLV
RFVFRQSFDVLRRRNWESSAVGKFLELLKCHLLQNDSETPSGLLLHILDLYMTELAAVGA
GELTADQNLIFIEPFCRKAAKTKNHALFSTICKSLFSTIIEQAPFAVDDLMKELKTAQES
DSGQESEEDDEQQEDKRRNAVGKSREGRLIKGSHLKTEEESDEELLHLGDSDAELSDEDF
GPVLQFDYAALADKLFELASRSNTPGHNRHKLYRVIKVLRGLSEGIFPQDEYPEEVSTDE
DDDMFGSRKRMKQPAHNEGVKEKGIPAGKKSKADTGKKQETFDRQSSNMEPVDAPVNKKK
KKKKRKTQNHNADSKSAGCSEHSVKQSPCSTSEALLEAQLQPLPPTNDSEPMVTDREQHL
TSATSDTSSEAPAGLSGNKKKKKKRKILKTEAERSASAGEGHEASVKVTAAALGRSNKQP
AWGLQRNDITIATEAKQTGCDEASGDNLMPKLATTDAAASAKKSQKMEETIAESPQAANR
KNRHKGRKGAGSPQITAGNMQLMQKSRKCLKLSADDGGADPEQSAGEAELISSAVNTRKR
KITVEFEFEADELEGTAAVNSISAAKNKTKKSKVNNVASEPSTPQSLKKTNKKNISGSDF
IIFQREVSVPPALYCKTNGSPGTPAASKKRQLTPTSESKKVTFGLKNNKTAEFKKTDRSL
LLSPEGLSRVPFDPQQKPKFGVLKSPPTTESTDSRKTSKSAKKAPNFSKKISSKSLPNTP
KRRPSAADFF
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggttcaggagccggaggtccaactggcccagaggttagcctccaatgagaag
gccgtccggatcaaggcgatgaagaaactacggaaatacatcagcgcccgctcactgaga
gcctcaggcggattcacaggagatgaactcctcaagttgtggaagggcctcttctactgc
ctgtggatgcaggacaaagctctgctacaggaggaactgtccaaccagatctccaccctc
atccacaacttccatgatctggataaacagctcatgtacctggaaagcttcttgcagacc
atgaaacgagagtggactgggatcgaccggctgcggatggacaagttctaccagctggtt
cgttttgtgttccgacaatcgtttgacgtcctgaggaggagaaactgggaaagcagtgcg
gttgggaagtttttggagctgctgaagtgtcatctccttcaaaatgacagtgagacgccc
tctggattgctgttacacatcttggacctttacatgacggaactagcagctgttggtgct
ggagagctcactgctgatcagaacctgatttttatagaaccgttctgcaggaaagcagcc
aaaaccaagaaccatgcgcttttcagcacaatttgcaaaagcctattcagcaccatcatt
gaacaggctccttttgctgtggatgatcttatgaaggagctgaaaacagcacaggagtct
gattcagggcaggaatctgaggaagatgatgaacagcaggaagataagaggagaaatgca
gtcggtaagagcagagaggggaggctgataaaagggagtcatttaaaaacagaagaagaa
agtgacgaggagctgcttcacttgggggactctgacgctgagctgtcagatgaagacttt
ggaccggttctgcagttcgactatgctgctctggcagacaagttgtttgagctggcgagt
cgcagcaacacacccggacataaccgacacaaactctacagagtcatcaaagtgctgcgt
ggtctcagtgaaggcatatttccacaggatgaatatccagaggaggtttccacagatgaa
gatgatgatatgtttgggagcaggaagaggatgaagcaaccagctcacaatgagggtgtt
aaggagaaagggataccagcagggaagaagagcaaagctgacacagggaaaaaacaggaa
acattcgacagacaaagtagcaatatggaacctgtagatgcacctgttaataagaagaag
aagaagaaaaagaggaaaacacagaatcacaatgccgactcaaaatctgcaggatgttca
gaacattcagtaaaacaaagtccatgttccacttcagaggctctattagaagcccagctg
cagccgctcccccccaccaatgactctgaacccatggtgacagacagagagcagcacctg
acctctgctacatcagacacgtcctctgaagcaccagctgggctctctgggaacaagaag
aagaagaagaaaaggaagatcctgaaaactgaggctgagaggtccgcttcagcaggggaa
ggtcatgaagcctcggtcaaggttactgctgcagctcttggcaggagcaacaagcagcct
gcatggggcctgcagaggaatgacattaccatagcaacagaggccaaacaaacaggctgt
gatgaagcatcaggagacaatctaatgcctaaactcgcgacgacagatgctgccgcttca
gccaagaagagtcagaagatggaagagactatcgctgagtcgccacaagcagcaaacagg
aagaaccgtcacaaaggaaggaagggggctggcagccctcagatcacagctggaaacatg
caactcatgcagaaaagcaggaagtgtttgaagctgtcagctgacgacggaggtgcagac
ccagagcagtccgcaggggaagctgagctgatcagctctgcagttaacaccaggaagagg
aaaatcactgtggagtttgagtttgaggcagatgagttggaaggaactgccgcagtcaac
agcatatcggcagcgaagaacaagaccaagaaaagcaaagtgaacaatgtagccagtgag
ccatcgactccccagagcctcaaaaagacaaacaagaagaatatttcagggtctgatttt
atcatctttcagagggaagtttcagttccaccagcgctgtactgtaagactaatggcagc
ccgggtacacctgctgccagtaagaagaggcagctgacccccacatcagagtcaaagaaa
gtcacgtttggtctgaagaataataaaactgctgagttcaagaagactgatcgcagcttg
ctcctcagtccagaaggtttgtctcgggtgccctttgacccacagcaaaaaccaaagttt
ggggtcctaaagtctccccccacgacagagtccactgactccaggaagacgtcgaagagc
gctaagaaggcccctaacttctccaagaagatcagttccaaatctctgccaaacacacct
aaaagacgaccttcagcagcagactttttttaa
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