Xiphophorus hellerii (green swordtail): 116723418
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Entry
116723418 CDS
T07363
Name
(RefSeq) LIM and senescent cell antigen-like-containing domain protein 1 isoform X1
KO
K23354
LIM and senescent cell antigen-like-containing domain protein 1/2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
116723418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116723418
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
LIM domain-containing proteins
PINCH family proteins
116723418
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF7685
DUF7479
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
116723418
NCBI-ProteinID:
XP_032424176
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Position
7:22775089..22812302
Genome browser
AA seq
407 aa
AA seq
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MSVEMNGRAVPPSIPEDGEAPDHIRHGEMNGYHQRLQAGDGGEAELPVSKTQRRKSDVKV
YKEFCDFYARFNMANALANAMCERCKSRFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG
LFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFCCDLCQAVLADVG
FVKNAGRHLCRPCHNKEKARGLGKYVCQKCHAIIDEQPLLFKNDPYHPDHFNCTNCGKEL
TADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLG
HRHYERKGLAYCETHYNQLFGDVCYHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK
DKFVEVDLKPVCKHCFERLPDDLRRRLAKRERDSKEKKKKPLIPMCL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggaaatgaacgggcgcgccgtgccaccttccatacctgaggatggcgaagcc
ccggaccacatccgccacggagagatgaacggctatcaccagaggcttcaggctggggat
gggggcgaggctgagctcccggtgtccaagactcagaggcggaagagtgatgtcaaagtc
tataaagagttctgtgacttttatgctcgcttcaacatggccaacgccctggccaacgcc
atgtgtgaacggtgcaagagccgctttgcgccagcggaaaagatagtgaacagcaacggg
gagctttaccatgagcagtgcttcgtctgtgcgcagtgtttccagcagttcccagaggga
ctcttctatgagtttgaaggcaggaagtactgcgaacatgacttccagatgctgttcgct
ccttgttgccatcagtgtggtgagttcatcattggccgtgtgatcaaggcgatgaacaac
agctggcaccccgagtgtttctgctgtgacctttgccaggctgttctcgcagatgttgga
tttgttaaaaacgccggacggcatctgtgtcgcccctgtcacaacaaggagaaagcccgt
ggactgggaaaatatgtctgtcagaagtgtcacgccatcattgacgagcagccgctgctt
ttcaagaacgacccctatcacccagatcacttcaactgcaccaactgcggtaaggagctg
acagcggatgctagggaactgaaaggcgagctctactgtctgccctgccatgacaagatg
ggcgtcccaatctgcggggcctgcaggagacccatcgagggccgcgtggtcaacgccatg
ggcaagcagtggcacgtcgagcattttgtgtgtgctaagtgtgagaaacccttcctgggt
caccgtcactacgagcgcaagggcctggcttactgtgagacgcactacaaccagcttttt
ggagacgtttgctatcactgcaatcgtgtcatcgagggagacgtggtgtctgccctcaac
aaggcctggtgtgtcaactgcttcgcctgctccacctgcaacaccaagctcactctcaag
gataaatttgttgaggtggatttgaagcctgtgtgcaaacactgcttcgaaagactccca
gacgatttgagacgccggctggccaagcgtgaacgtgactcaaaagagaagaagaagaaa
ccgctgatacccatgtgtctttga
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