Xiphophorus hellerii (green swordtail): 116723425
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Entry
116723425 CDS
T07363
Symbol
hoxd3
Name
(RefSeq) homeobox protein Hox-D3 isoform X1
KO
K09303
homeobox protein HoxA/B/D3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116723425 (hoxd3)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116723425 (hoxd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
116723425
NCBI-ProteinID:
XP_032424193
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Position
7:17345729..17365761
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AA seq
417 aa
AA seq
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MQKATYYDNSGLFGGYTYPKPDSYSYGPAHQSYPAPNIDTDYQGSVCPIQTSAVRPPPAL
KDSDLNGDCMRQSSSQSNNNNNNSSSSSSSGSSQANSISEQQVPPLSAASPSSNSSTSQK
KKSPNNSASGPATPALTKQIFPWMKETRQNSKQKSNNNCAAAGRDPDGGEVSDEKSPPGP
ASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD
QKSKGLAHSPMGHSPDRSPPLSGPNHTGYAGQLQNVNSLSYDAPSPPPFAKPQQNMYGLA
AYTAPLGGCIPQQKRYPGSEYEHHSMQSNGGFANANLQGSPVYVGGNFVDSMPASGPMFN
LGHLPHPSSTSVDYSCAAQIPGNHHHGPCDPHPTYTDLTSHQVSQGRIQEAPKLTHL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggcaacctactatgacaactctggactgtttggaggttacacctaccccaaa
ccagactcctacagctatggccctgctcaccagtcctacccggctcctaacattgacact
gattaccaaggctctgtgtgtcctattcaaacctctgctgtcaggccacctccagccctt
aaagacagtgacctgaacggggactgcatgcggcaaagcagcagtcagagcaacaacaac
aacaacaacagcagcagcagcagcagcagtggcagcagccaagcgaacagtatttctgag
cagcaggtacccccactgtctgcagcctccccgagctccaacagctccacatcccagaag
aagaagtctccaaacaacagcgcgtcgggcccagccaccccggccctcaccaagcagatc
ttcccctggatgaaggagactaggcagaactcaaagcagaagagcaacaacaactgcgct
gctgcaggtagagatcctgatggtggggaggtgagtgatgagaaaagcccgcccggacca
gcctccaagcgggtcagaactgcttacaccagcgcgcagcttgtggagctggaaaaggag
tttcactttaaccgctacctttgtcgtccacggagggtggagatggccaatctgttgaat
ctcaccgagcgtcagataaagatttggtttcagaacaggaggatgaaatataaaaaggac
cagaagtcaaaggggctggcgcactcccccatgggacactccccggacagaagcccgccg
ctgagcgggcccaatcacaccggatacgcgggccagctccaaaacgtgaacagcctgagc
tacgacgcgccctcgccgccgcccttcgccaagccccaacagaacatgtacggcctggcc
gcgtacacggcgccgctgggcggctgtatccctcagcagaagcgctacccgggctccgaa
tacgaacaccacagcatgcagagcaacggaggcttcgccaacgccaatttgcaaggcagc
cccgtgtacgtgggtgggaactttgttgattccatgccagcctcgggccccatgttcaac
ctcggccatctcccccacccatcatccaccagcgtggactacagctgtgccgctcaaatc
ccaggaaaccaccaccacggaccgtgtgacccccaccccacgtacacagacctcacctct
caccaagtttctcagggaaggattcaggaagcgcctaagctgacgcatttgtaa
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