Xiphophorus hellerii (green swordtail): 116723479
Help
Entry
116723479 CDS
T07363
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116723479
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116723479
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116723479
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
116723479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
TS_C
Motif
Other DBs
NCBI-GeneID:
116723479
NCBI-ProteinID:
XP_032424353
LinkDB
All DBs
Position
7:27761834..27781267
Genome browser
AA seq
667 aa
AA seq
DB search
MLACRPLLVTWALLTSSVRSQSWRPCTDLQPIDLLSKALPRPGQATPTQVQMVQSRGSRG
IRLTGTVPTALSFTASQIFTNCDYFPSEFSLVATMKIQRLRKKTNQYIFSVMKEGSESLL
LGLRVSENRLHLLTSPPGGGGRRRISFKNVRLDDNRWHTVVLAVTGPYATLTVDCGPPVE
IKQVRTFPSTLNTRGSMFIIGSRGHWRGRFSGLLRQLVLLPGSDATPRLCPNSEPSLAEL
SVPQVLKTSPLQPDQKGSVYPYEAEARVTAGDRPPCSGPEKGQLWFNVRKKGLFICDGMM
WRTLMQDKERLDYVEDYQDLYTRSETLDVELFSIPSEGLFMAAANRDSRPGSGIYKWING
SFQLYQNASTQEAQAWKYFTIDDKVFLVVADMQKAEPELSTIYRWNRRQKRFLRYQTLET
HSARDWEAFQIHNNSFLVVANHMRAKDSNHNIHSVIYRWNPDTKLFEVNQTLSTSGAYDW
EFFTIGPYHFLVVANTFNGQNTTISSTIYVWLDGCFRSYQNITTVGATDWETFQIDGRFF
LAVANSQRFSRKSQSTYNINSTVYELNMFTQTFLRFQDIPTHSALDWEFFTIGDEKFLVV
ANSYDGSSYSVNSVVYRWQGYEGFVPVHSLPTFGCRDWEHFTTEQGSFLIYSSATSRLSK
VFRLRTY
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgtgtcgccccctgctggtcacctgggctctgctcacctcctcggtccgaagc
cagagctggaggccgtgcacagacctgcaacctattgacctcctgtccaaagccctgcca
cgcccaggacaagccacgcccactcaggtgcagatggttcagtccagagggtccagaggt
atcaggctaaccggcaccgtaccgactgctctgagttttaccgcttcacagatattcacc
aactgtgactattttccttctgagttctcgttggttgccaccatgaagatacagagactg
aggaagaagacgaatcagtacatcttctctgtgatgaaggagggatctgagtcattgctg
ctggggctgcgtgtctctgagaaccgtcttcaccttctgacgtcgccccctggtggtgga
gggcggagaaggatcagttttaaaaatgtcagattggacgacaacagatggcacactgtg
gttctggctgtgaccggtccttacgccacattgaccgttgactgtggaccacctgtggaa
attaagcaggtccggaccttccccagtactctgaacaccagagggtccatgttcatcatt
ggcagcaggggccactggaggggccgcttctctggtctacttcgtcagctggttcttctt
ccaggctcagacgcaacacccagactttgtcccaactctgaacccagtctggcagagctc
tctgtcccgcaggtcctcaagacctccccgctccaaccggaccagaagggctcagtttat
ccatacgaggccgaggccagagtgactgcaggcgatcgtcctccatgttcaggcccagag
aaaggtcagctgtggttcaacgttcggaagaaaggtctgttcatctgtgacgggatgatg
tggaggacgctcatgcaggataaagagcgtctggactatgtggaggactaccaggacctc
tacacccgctcagaaaccttggatgtggagctcttctccatcccgtctgaaggcctgttc
atggctgcagccaatagggattcccgacccggttctggtatttacaaatggattaatggg
tcattccagctatatcagaacgccagcactcaggaagctcaagcctggaaatatttcacc
atcgatgacaaggttttcctggtggtggcggacatgcagaaggcagaacctgagctgtcg
accatctaccggtggaatcgtcggcagaaacgtttccttcgctatcagactctggagacc
cactctgctcgggactgggaggcctttcagatccacaacaacagcttcctggtggtggcc
aatcacatgcgagccaaagactccaaccataacatccacagtgtgatctacaggtggaac
cctgacacaaagctgtttgaggtgaaccagactctgtccacgtctggagcctatgactgg
gagttcttcaccatcggcccgtatcatttcctggtggtggcgaacaccttcaacggtcag
aacaccaccatcagctccaccatttacgtctggttggacgggtgtttccggagctaccag
aacatcacgacggttggagcgacggattgggagacgttccagatcgacggcaggttcttc
ctcgccgttgccaacagtcagcggttctccaggaaatcccagagtacctacaacatcaac
tccaccgtgtacgagctgaacatgttcacccagaccttcctccgcttccaggacatcccg
actcacagcgctcttgactgggagttcttcaccatcggagacgagaagttcctggttgtg
gcgaactcttatgatggcagttcgtactccgtgaacagcgtcgtctacaggtggcagggc
tacgagggcttcgtcccggtccacagtctgcccacctttggctgcagagactgggaacac
ttcaccactgagcagggctccttcctcatctactccagcgccacctccaggctcagcaag
gttttcagactcagaacgtactga
DBGET
integrated database retrieval system
