Xiphophorus hellerii (green swordtail): 116723491
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Entry
116723491 CDS
T07363
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116723491 (stxbp5l)
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116723491 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
116723491 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Synaptobrevin
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
116723491
NCBI-ProteinID:
XP_032424358
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All DBs
Position
7:24060713..24215101
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AA seq
1268 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTMGSPSCGSAAGTPTAAPTPKEIDVQETLVSENFQLCKTVRH
GFPYQPTSLAFDPVQKILAIGSRSGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFEGGTIVQWDLRAKKADFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTLWNLRNTTKPFQVTFPHGKIQKDGRKESCKPI
LKVEYKTSRSSEPFVIFSGGLSYDKAGRRPALTIMHGKAITVLEMDYPIVEFMVLCETPY
NNEVQDPYAVVVLLEKDFIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFADCPPDIIPI
LYSIGAKNKKTGYSHKEWPIGGGTWTLGSHTYPEIIITGHADGSIKFWDASAFTLQMLYK
LKTSKVFEKPKPGEGRAAELGEEDPFAVQMVSWCPHSRIFCVVGISAHIILYRFSKYDAN
TQIVSLEVRLQCEPEDIITPSENENNPCFSEPGSHSPQTHHQHPVSPGSRTPDGAKDSIP
CLKVKDKMVRVPPGYQSDLVIQLLWVDGEPPQQITSLDLNSAYGLLAFGNCNGLAVVDYL
QKTVILCISTLDLYGATDPYQRLTRSPRRNRQSTSEHCMRGLSNFYSDSKKRIRTSYQSL
TELTDNQQSIDMERSKSPTSVHYPTSLHNDPRILPEPVASLRASHCSPVFYLLDNVKGPG
RKLSLPTDLKTDLDHVNGHCTSPTSQPCSAGKPRIPMGPEGPRLTRRGPGRPPFRKAQSA
ACMEISLPVSHTEGHASRRAMLQQLHGVTMYSHDEHHTTASYCWNERESRENSFSRSRSS
SVSSIDRDTKEAITTLQFGESYGRKSDALPTPCLWVGTSLGVVILIPLSIPTDHEERMED
PVTVGPSGAVQMLKGSVLRFGFLDCNGALIQSPYEVWRDLNAPEDPDRPRRRKLVHFSPS
SSQDAFGEGHLAVVCSERQAKVFLMPSQSCLFVHNITESSFVLRADVVSLCNSVCLACFC
ANGHVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNEGQALYLSSPTEIQRITYSQEMC
DNLQEMLGELFTPIETPEAQNRGFLKGFFGGNAHTFDREELFGEAAAGKASRSLAQHIPG
QGGVEGMKVAASGAVGELARARIALDERGQRLGELEERTALMMTSAETFSKHAHELMLKC
KDKKWYQF
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtgctggacggtttgaccacctcctctccgggggggactatg
gggtccccatcgtgcggcagcgcggctgggactcccaccgcggcgccaactcccaaggaa
atcgacgtccaggagacgctggtgtcggaaaactttcagctgtgtaagacggttcggcat
ggattcccataccaacccacgtccttggcctttgaccccgtgcagaagatcctggccatt
ggttcaagatcaggtggtgtacgaatactgggccgaccaggggtggactgctactgtcaa
catgagagcggagcagctgttcttcaacttcagttcctcatcaatgagggggcgctggtt
acagcctgtgcagatgacacactacacctgtggaatctgcgccagagacgaccagcagtc
ttgcattcactcaaattcaacagagagaggatcaccttttgccacctgccctttcagagt
aaatggctgtacgtggggacggagcgtggaaacacacacatcgtcaacattgagtctttt
attttgtctggatatgttatcatgtggaacaaggccatagaactgtcaactaaaactcac
ccaggtcctgtagttcatctgagtgacagcccaaaggacgaaggcaagttgcttatagga
tttgagggtggaaccattgtgcagtgggacctccgggccaagaaggctgacttcagaatc
tactatgatgaggctatccattcagtcagttggcatcatgaagggaagcagtttatgtgc
agtcactctgatggcagcctgacgctatggaacctcagaaacactaccaagccattccag
gtcacctttcctcacggaaagatacagaaggatgggagaaaggagtcatgcaaacctata
ctcaaagtagagtacaagacctcaaggagcagtgagccttttgttatcttctctggtggt
ctttcatacgacaaagcaggacggcgaccagctttaaccatcatgcatggcaaagccatc
acggttctagaaatggactatcctattgtagagttcatggtcctctgcgaaactccatac
aacaacgaagtccaggacccttatgcagtggtggtactgttagagaaggacttcattgtg
gtggatctgacacagagcaactttcctgtgtttgaaaacccatatcccatggatatccat
gagtctcctgttacctgcacagcttattttgcagattgtccaccagacattatccccatt
ctttactcaataggagctaaaaacaagaagactggctatagtcacaaggaatggccaatt
ggtggtggaacatggacattaggctctcacacttatccagaaatcatcatcacaggacat
gctgatgggtcaataaaattttgggatgcatctgcattcacactgcagatgttgtacaag
ctgaagacctccaaagtgtttgagaagccaaagccaggtgagggccgggctgctgagctg
ggggaggaagacccttttgctgttcagatggttagctggtgccctcatagtcgcatcttc
tgtgtggtcggcatctcggctcacattattctgtatcgcttcagcaaatatgatgccaac
actcagatagtgtccttagaagtacgcttgcagtgtgagccggaggatattatcactcca
tctgagaatgaaaacaatccctgcttctcagagccaggctcccactcaccccaaacccac
caccaacacccggttagccctggcagcagaacaccagacggtgctaaagacagcatcccc
tgcctcaaagtaaaggacaagatggtccgggtccctcctggctatcagtcagacttggtc
atacagctgctgtgggtggatggtgaacccccacagcaaatcaccagtctggacctcaat
tctgcatatgggctattggcgtttgggaactgtaatggtcttgcagtggttgactactta
caaaaaactgttatattgtgtatttcgacactggatctatacggagccactgatccctat
cagcgccttactcgttccccccgtaggaacaggcagtccacctcagagcattgcatgcgc
ggcctgtctaacttttattcagattcaaagaaaaggatccgtacatcctatcagagcctt
actgaactcactgacaaccagcagtccatagacatggaaagaagcaagtcacccacttca
gttcattacccaacctcccttcacaatgatccacgcatcctgccagagcctgtggccagt
ctgagagccagccactgcagtccagtcttttacttactggacaatgttaagggacccggc
agaaagttaagtctgcccacagatcttaagactgatcttgatcatgtcaatggacattgc
actagtcccacctctcagccctgctcggcggggaagcctcgcattccaatgggtcccgaa
gggccacggctaacccgcagaggccctggccgaccacccttccgaaaggcccagtctgct
gcttgcatggagatctctttgcctgtgtcccacactgaagggcatgcatcaaggagggca
atgcttcagcagttacacggagtcactatgtactcccatgacgagcaccacaccaccgcc
tcgtactgctggaacgagagagagagtcgtgaaaactccttcagccgctctcgcagttcc
agcgtgtctagcattgacagggacaccaaagaagctatcaccacactgcagtttggagag
tcctatggacgcaagagtgatgccctgcccactccatgtctgtgggtagggactagctta
ggagtggtcatccttatcccactatcgatccccactgaccacgaggagaggatggaggac
cctgtcactgttggccctagtggagcagtccaaatgttaaaaggctctgtgcttcgcttt
ggtttcttggactgcaatggagccctaattcagagcccatatgaggtttggcgggacctg
aatgccccagaggaccctgacagaccacggaggcgcaagctggtccacttttccccgtcc
tcttcccaggatgcctttggagagggacatttggccgtagtttgctctgagaggcaggcc
aaagtcttcttgatgccctcacagtcttgcctctttgtccacaacatcacagagtcgtcc
tttgtgcttcgagctgatgtggtatctctgtgcaacagtgtgtgcctggcctgcttctgt
gctaacgggcacgtcatgacactcagtttgcccagcttaagaccgctgatggatgtcaat
tacctgcctctgacagacatgcgcatagcaagaaccttttgtttcaccaatgaggggcag
gcactgtatctcagctccccgacagaaatccagagaattacatacagccaggaaatgtgt
gacaacctgcaggaaatgcttggagaactgtttactccaatagaaacaccagaagctcaa
aacagaggatttttaaagggcttctttggaggaaacgcccatactttcgacagagaggag
ctttttggtgaggcggcagctgggaaggcttctcggagtctggcacagcacatccccggt
cagggaggcgtagaaggcatgaaggtggcagcgagtggagcagtgggggagctggcacgg
gctcgtattgctctggatgagagaggccagaggcttggggagctggaggagcggaccgct
ctgatgatgaccagtgcagaaactttctccaaacatgctcatgagctgatgctgaagtgt
aaggacaagaagtggtaccagttctaa
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