Xiphophorus hellerii (green swordtail): 116723508
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Entry
116723508 CDS
T07363
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00100
Steroid biosynthesis
xhe01100
Metabolic pathways
Module
xhe_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
116723508 (lss)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
116723508 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TPR_9
TED_complement
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
116723508
NCBI-ProteinID:
XP_032424405
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Position
7:complement(31410139..31424172)
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AA seq
735 aa
AA seq
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MSEGTQLRRRGGPFKTEPATDLSRWRLRNAEGRQTWSYVDDQETPSREQTMLEAHSLGLD
ISQFVSDSSASETALNAAVKGMNFYRRLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
HEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTSLRILGVDPDDPDLVRARNN
LHSKGGAVGIPSWGKFWLAVLNVYSWEGLNTLLPEMWLFPAWMPAHPSTLWCHCRQVYLP
MSYCYAVRLSAEEDPLILSLRQELFVQDFASIDWIAQRNNVAACDLYTPHSSLLSVAYMV
LNLYEAHHSVALRKMAVRELYDHIQADDRFTKCISIGPISKTINMLVRWYVDGPTSAVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDDPNLVGCLHDAHDFLR
VTQIPENPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEVCPSVRQPIS
SQRLYDAVNVLLSLRNRDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAAMQ
ALRHFLQVHPDHRAAEIRSTLRDGLEFCRRVQRTDGSWEGSWGVCFTYGTWFGLEAFACM
GHTYQAEDVPVEVQKACRFLLQQQMSDGGWGEDFESCEQRRYVQSAAAQIHNTCWALLGL
MAVRHPDQQAIERGVQLLVQKQLLNGDWPQENISGVFNKSCAISYTCYRNVFPIWTLGRF
SRLYPSSPLAGKLKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggaacgcagctgcggaggcgaggcgggccgtttaagacggagccggccaca
gacctgagccgctggaggctgagaaacgcagagggcaggcagacctggagctacgtggac
gaccaggagacacccagcagggagcagaccatgctggaagctcattctctgggtctggac
atcagtcagtttgtgtcagactcctcggcctctgaaacggctctgaatgctgcagttaaa
ggtatgaacttctacagacggctccaggctgaggacggccactgggccggggactacggt
ggacccctcttcctgctcccaggtctccttatcacatgtcatgttgctaagattcctctg
catgaggcctggaagaaggagatggtgagatacctgcgctccgttcagctgccagacgga
ggctgggggctacacattgaagataaatccacagtgtttggaacggcgctgagctacacg
tctctgaggattctgggagttgatcctgatgatccagatctggttcgtgctcggaacaac
ctgcacagcaaaggcggcgccgtcgggatcccatcgtgggggaagttctggttggctgtt
ctgaacgtttacagctgggagggactgaacacgttgctgccagagatgtggctcttcccc
gcctggatgccagcccacccatccaccctgtggtgccactgccgccaggtctacctgccg
atgagctactgctacgctgtcaggctgtcggcagaggaagaccctctaattctcagcctt
cgacaggagcttttcgtccaggacttcgcctccatcgactggattgctcagcggaacaac
gtggccgcctgcgacctgtacactcctcacagctcgctgctctctgtcgcctacatggtg
ctgaacctgtatgaagctcatcacagcgtcgcgctgaggaagatggccgtcagagagctg
tacgaccacatccaggccgacgaccgcttcaccaagtgcatcagcatcgggccgatctcg
aagacgatcaacatgctggttcgctggtacgtggacggccccacgtcggccgtgtttcag
gaacacgtctccaggatcccagactacctgtggctgggactggatgggatgaaaatgcag
ggaaccaacggctctcagctctgggacacgtgtttcgccgttcaggctttcctggaggct
ggagcgcaggacgaccccaacctggtcggatgtctccatgacgcccatgacttcctcagg
gtcacgcagattcctgagaatccacctgaataccagaaatactacagacagatgaacaag
ggcggcttcccgttcagcacgcgggactgtggctggatcgtggccgactgcacggcggag
ggcctgaagtcggtgatgctgctgcaggaggtctgtccctccgtcagacagccaatcagc
tcgcagcgtttgtacgacgccgttaatgtgctgctgagcctgaggaacagagacggagga
tttgctacgtatgaaactaaacgaggaggaaaactcctggagctgctcaacccgtctgaa
gtgtttggtgacatcatgatagactacacctatgtggagtgcacgtctgcagccatgcag
gcgctgaggcatttcctccaggttcaccccgatcaccgcgccgcagagatcagatccacc
ctgagagacggcctggagttctgccggcgggttcagaggaccgacggatcctgggaggga
tcctggggagtttgcttcacatatggaacctggttcggtctggaagccttcgcctgcatg
ggtcacacctaccaggccgaagacgtcccggtggaggtgcagaaagcgtgccggttcctg
ctgcagcagcagatgtctgacggaggctggggggaggactttgagtcgtgtgagcagcgg
cgctacgtccagagcgccgcggctcagatccacaacacctgctgggctttgctgggactc
atggccgtcagacatcctgaccagcaggccatcgagagaggagtccagctgctggtccag
aagcagcttctcaacggagactggcctcaggaaaacatttctggtgtgttcaacaagagc
tgcgccatcagctacacctgctacagaaacgtcttccccatctggaccctgggccgattc
tccaggctctatcccagcagcccgctggctgggaagctgaagctctga
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