Xiphophorus hellerii (green swordtail): 116723537
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Entry
116723537 CDS
T07363
Symbol
fancb
Name
(RefSeq) Fanconi anemia group B protein isoform X1
KO
K10889
fanconi anemia group B protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116723537 (fancb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116723537 (fancb)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116723537 (fancb)
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NCBI-GeneID:
116723537
NCBI-ProteinID:
XP_032424449
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Position
7:15308652..15319081
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AA seq
842 aa
AA seq
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MEKLSSDDSNRKVHGLSHGGKIILFTCKRDPAVNVSERSGLTFRSFYFEREGNAFLNATE
GATAISRKLSAHVDIVTCKCAVDVQKRVKTAFVLVTKKSEKGGSFKYSLLALRSSHRLEP
CIEFKLPYQMKGKVCILQGPTVLWSHDNSVSYTSPLAEGVRKIPIQMSKCLFGELPIQKG
QLFALGLSEPLLANHSPTLGYLFEGGHAFDGCLILPHPYISITQCMRVLTADRVDDVLRC
AVIAATSNKQLVLFENGTVKDTCEVPFGQVEDIQMVDTGRNGCLFVVSFKQGHVCAVWKE
TFQIASCWSDVDSAHVDDFLGCGTEQILLIFRNKGISSRPLEKFLITDLCGISYSCGQGS
EVQMASPPPQENSLLTLQALESRLQSGLIVLQELEREVRVKDRVLQQSIQVLTDVLSGRE
TVLSQPEQEGLVALWDSDEESNDETLDDKSHESPALSSRPKIDKLWHRITEEQLVVGLIL
TADSGIPASGVSLSLLTEPGQNSTPAVIQTRSQVFWLPACGPSTPTLSSPSSGFTFSEPA
AKRSRQHIASDDFSGCRLAVTAVTKLAPLLTSGCVKCRAMLHYVEKAEAVFPGSSPTTAV
LHCGEVSLDIHDLCQKPLLQNPQIKTDEVREDLLSLLTVLDNWVLRIDSPDYSLGDIDGW
IKRREGFKKIDVSPEYLLLDSPGSSAPMLLRWHQINPFQGDLSIHSSQLQMLQFLDSMLS
YLPDSCFLQPVKRARSQSTAQKLASALEKEVLSLREGLSSLLCVKDEEERNKGRTGHGEI
PDSGSAEDLIRCCREAWQQNVEKSRLRLNPVVDAGRYREMIQSILQVKMESDLAALRQLY
QS
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttgtcatcggatgattcgaatcgaaaagtccacggcctctcacacggtggc
aagataatcctattcacctgcaaacgtgatccagccgtgaatgtaagcgaaagaagcggc
ctgacgttccgcagtttctactttgaacgtgaaggcaacgcgttcctgaatgcaacagag
ggagcaactgcaatcagtaggaaactgtcagctcatgttgacattgtgacgtgtaaatgc
gcagtagatgttcagaaaagggttaaaactgcgttcgttttggtgacaaagaagagtgag
aagggaggcagctttaagtacagcctactggcactgagaagctcacaccggctggagccc
tgcattgagttcaagctcccctaccaaatgaagggtaaggtgtgcatccttcagggtccc
acagtgctgtggagccatgacaacagtgtgtcttatacatcccctctggcagaaggcgtg
cgaaaaatccccattcaaatgtcaaaatgtctttttggagaactacccatccagaaaggg
cagctttttgctcttggactttcagaaccacttctagctaatcattcccctacacttggc
tatttgtttgagggtggacacgcgtttgatggctgtctgattttaccacatccctacatt
tccatcacacagtgcatgcgggttctcactgctgacagagtagatgacgtgctgagatgt
gctgttattgctgcaacttcaaataagcagcttgtgctctttgaaaacgggactgtaaaa
gacacatgcgaggttccctttgggcaggttgaagacattcagatggttgacacaggaaga
aacggatgtctgtttgttgtatcctttaaacagggccatgtttgtgctgtatggaaggaa
acatttcagatagcctcctgttggtcagatgtcgactccgcacatgtggatgatttcctt
ggatgtggaacagaacagattctgttgatttttagaaataaaggaatatccagcaggcca
ctggaaaaatttctcatcactgacctttgtggtatttcttactcttgtggtcaaggctct
gaagtacagatggcaagtccacctcctcaggaaaactcacttctcactcttcaggctttg
gaatccagattacagagtggattgattgtccttcaagagcttgaaagagaagtgagagtg
aaggacagagttctacagcaatcaatccaagtcctcactgatgtgctttcaggaagggag
actgttctcagccagcctgagcaggaaggccttgttgccctgtgggacagtgatgaagag
tccaatgatgagactctggatgacaagtcgcatgaatcgccagcgctgtcttccagacct
aaaattgacaagctgtggcatcgcatcactgaggagcagctggttgttggactgatccta
accgctgacagtggcataccagcgagcggtgtgagcttatccctcctgacagagccgggc
cagaactcgacgcctgcagtaatccagacccggagccaagtgttctggctgcctgcgtgc
ggcccctcgacaccaacactctcctccccatcgtctggctttacgttctctgagcccgca
gccaaaagaagcaggcagcacatcgccagcgacgatttcagtggatgcagactggctgtg
actgcagtgaccaagctggcacctcttctgacctctggctgtgtcaagtgccgtgccatg
cttcattacgtggagaaagcggaggctgttttccctgggagcagcccaacaacagctgta
ctccattgtggggaagtttcattagacattcatgatctttgccagaagccgcttctgcaa
aaccctcaaataaaaacagatgaggttagagaagaccttctgagtctgttgacagttctg
gataattgggttttgcgcatagactctccagattatagcctaggtgacatagatggctgg
atcaagaggagagagggttttaaaaagatagacgtgagtcctgaatatctacttttagat
tctccaggatcttcagctccaatgctgctgcgctggcatcagataaaccctttccaaggg
gatttatccatccacagcagccaattacaaatgctccagttcttggactccatgctgtcg
tacctccctgattcctgcttcctccaacctgtcaagcgcgcaagaagtcagagcacggct
caaaaattagcttctgctctagagaaagaggtgctgtcactcagagagggcttatcctca
cttctgtgtgtcaaagatgaagaagagagaaacaaggggcgcactggacatggtgaaatc
cctgactctggttctgctgaggatctcattaggtgttgtagggaggcgtggcagcagaac
gtggagaagagccggttgaggctgaacccggtggtggatgccgggaggtatcgtgagatg
atccaaagtattttacaagtcaagatggaatcagatttggctgctctgcgtcagctgtat
caatcatag
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