Xiphophorus hellerii (green swordtail): 116723573
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Entry
116723573 CDS
T07363
Symbol
tfdp1
Name
(RefSeq) transcription factor Dp-1
KO
K04683
transcription factor Dp-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
xhe04110
Cell cycle
xhe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116723573 (tfdp1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116723573 (tfdp1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116723573 (tfdp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116723573 (tfdp1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116723573 (tfdp1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
116723573 (tfdp1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
116723573 (tfdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
Motif
Other DBs
NCBI-GeneID:
116723573
NCBI-ProteinID:
XP_032424491
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Position
7:complement(13027572..13037662)
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AA seq
410 aa
AA seq
DB search
MAKDAGLIETNAELKVFIDQNLSPSKGVLSLVTVQPTVAPKQLLPKTLGPSNVNVAAHMQ
HVPHMVIGTPQRPTVSNTILVNSPHTPSSQFLTQTQPADASPWSSGKRGKKGEKNGKGLR
HFSMKVCEKVQKKGVTTYNEVADELVAEFSSSDNHMSPNDSHVYDQKNIRRRVYDALNVL
MAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNL
VKRNKETEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIHDD
IEVLKRMGMACGLEVGKCSPENLKIARSLVPKVLDPYVIEMSKGPISNVYITGGSSANGG
RYTASDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDEEDEYEENDDED
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgctggtctaattgaaacaaatgcagagctgaaagttttcatcgatcag
aatctgagccctagcaaaggtgttctgtccttggttactgtccagcctacagttgctccc
aaacagcttctacccaaaaccctcgggccgtctaatgtgaacgttgctgcacacatgcag
catgtgccacacatggtgattggaacgccgcagaggccgacggtatcgaacaccattctg
gtaaacagtccacacacgcccagctcccagttcctaactcagacccagcccgctgatgcc
tcgccctggtcgtcaggaaagcggggtaaaaaaggggagaagaatggaaagggcctgcgg
catttctccatgaaagtgtgcgagaaggtgcagaagaaaggagtcaccacctacaacgaa
gtggcagacgaactggtggcagaattcagctcttcagacaaccacatgtcacctaatgac
tcgcacgtttatgaccagaaaaacatacggcggcgtgtttacgacgcgctcaatgtgctc
atggccatgaacatcatctccaaagagaagaaagaaatcaagtggattggcttgcccacc
aactccgcacaggagtgccaaaacctggaggtggagagacaaaggcggctggagaggatt
aagcagaaacaatcacagctgcaggagctcatactgcagcaaatagccttcaagaacctc
gttaagaggaataaagagacagagcagcaagcaaacagacccccacctccaaactccatc
atccatcttccatttattatcgtcaacaccagtaagaagaccgtcatcgactgcagcatc
tccaacgacaagtttgagtatttgttcaacttcgacagcatgtttgagatccacgacgac
attgaggtgctaaagcgcatgggcatggcctgtggcttggaggtggggaagtgttctcct
gaaaacctaaaaattgcacgaagccttgtgccaaaagtcctggatccttacgttatagag
atgtcaaaaggccccatcagcaacgtctacatcactggaggctcttctgccaatggaggt
cgttacactgcaagtgacggctgcactgacggcaccatggcgtccagctcaaacgactct
cactacagcgggtctcgtgttgagacccccgtctcttacatgggggacgacgacgaggag
gatgagtatgaggaaaacgacgacgaagactaa
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