Xiphophorus hellerii (green swordtail): 116723743
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Entry
116723743 CDS
T07363
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116723743
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116723743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
PAS_9
PAS_4
bHLH_NPAS4
MAPB1_N
Motif
Other DBs
NCBI-GeneID:
116723743
NCBI-ProteinID:
XP_032424749
LinkDB
All DBs
Position
7:1667959..1699587
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AA seq
941 aa
AA seq
DB search
MYAGRKRRKPVQRAVKQPPAEGTKSNPSKRHRDRLNGELEQLASLLPFPEEVTASLDKLS
ILRLSVSYLRAKNFFSVALSSQKGAAGARGNNEKPGGGEKQVCEGELLLQALNGFVLVTT
ADGTIFYSSHTIQDYLGFHQTDVIHQSVYELVHTEDQQELRRNLHWALNPSQAAGSAMSQ
DSPQEMEPDSSSSLVTYNPKQLPPENSSFLERNFVCRFRCLLDNSSGFLALNIQGRLKFL
HGQNQQQENGGKGTTQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFTPLACDAKGKI
VLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTKENSWKWVQAN
ARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTFATGEALLYQSNHPIADFIDG
SQEKNSSKSKKSRAERLARDGLDPGSLLGALMSQDQSVYVYQPNTTFHSSFIGEQTNFSV
SEPSRQSQSWDVPHNGVLEPGISEPSASFDPLLATLDSLTLEGQGVVDAEDGSCSNSELF
GALEGLGLSAEDLELLLLDERMIRVEMDSDRVPALDDLLTNDEILSYIYNCIEGRAVSIE
HGRQALPRTTATIPTTVSASESNPRSGADVQIHFPHCKPCLVGQAPIVQLSQQMQQHLNM
QKGRLGHDWSQHRDQLTNGELLGHNPGLHNGHWTAQDTLICAGLHLQHTNTQHMVFSNKA
TELDGQFLQQQMHQQFQHYQQSITQKQLSEHCHVQQSSTTLNGMCDAFSNWSTTKPQWQD
FDFTESPGNEPCPDNSQKPITSLDLCTNYRMAEMPNVDSTVSGSALYGKVGQQDRSEFTV
SSFQQQQEEIALPSTQCPLPKTSLEQIVGVGKPCSQPGRSDMMSSEIGNDPSNSKMKGCI
LDTSYPGDCVNENGAAPPAVKVVSSETIPQVPESQASGFYL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaggacgcaagaggagaaaacccgtccagagagcggtgaaacagccacctgct
gagggaacaaagtcaaatccgtccaaacggcacagagaccggctgaacggcgaactggag
caactggccagcctgctgccatttcctgaggaggtcactgctagtctggacaaactatcc
atcttacggctgagcgtcagctacctacgagccaagaacttcttctctgttgccctgagc
agtcagaagggagccgctggagccagagggaacaacgagaaaccaggaggtggagagaag
caggtgtgtgaaggagagctgctgctgcaggctctcaatgggtttgtcctggtcactact
gcagatgggaccattttctattcctctcacaccatccaagactacttgggcttccatcag
actgatgtcattcaccagagtgtgtatgagcttgtccatacagaggaccaacaggaactg
agaagaaacctgcactgggctttgaatccttcccaggctgcaggatctgccatgtcccag
gactccccccaagagatggaacctgacagcagctcttctttggtcacctacaaccccaag
cagcttccaccagagaattcctccttcttagagaggaattttgtgtgtcgcttccgctgc
ctgctagataactcctctggcttcctggctctgaacatccagggcaggctcaagtttctg
catggacaaaaccagcagcaggaaaatggagggaagggcacaactcaacttgcccttttt
gccatcgcaactcctctgcagcctccgtccatcctggagatcaggaccaaaaatatgatt
ttcaggactaaacacaagctggattttacacccttggcctgtgatgctaaagggaaaatt
gttcttgggtacactgaggctgagctacgagttcgaggatctggctatcaattcatccat
gcagccgatatgttgtactgtgctgagaaccatgtcagaatgataaaaacaggagagagc
ggactgactgtgtttaggctcctcaccaaagagaatagctggaaatgggtccaggccaat
gcccggctggtgtacaagaacggcaaaccagactacatcatcgccacccagaggccactt
ctagatgaagagggaggagaacatctgcgtaagcgctccatgcatctcccctttaccttt
gccacaggtgaggccttactgtaccagtccaaccaccccatcgcagacttcatcgatgga
agccaggagaaaaacagcagcaagtccaagaaaagccgagctgaaaggctggcaagggat
ggcttggatcctggttctcttcttggggctctcatgagtcaggaccagtctgtatatgtt
taccaacccaacacaacctttcacagcagtttcattggagagcagacaaacttctctgtc
tctgaaccttcaaggcagagccagagctgggatgtgcctcataatggtgttttagagcca
ggcatttcagaacccagtgccagcttcgacccactgctagctaccctggattctcttacc
ctggaaggtcagggtgtggtggatgcagaggatgggagctgttccaacagtgagctgttt
ggagctttggaagggctgggtcttagtgccgaggacctggagctgctgctcctggatgag
cgaatgatcagggtggagatggattctgaccgtgtgcctgcgttggatgacctgttgaca
aatgatgaaatcctctcatatatctacaactgtattgaaggtagggctgtttccatagag
catgggaggcaggcacttcctagaacaacagcaacgatccctaccacagtgtcggcatct
gaaagtaatcccagatctggtgctgatgtgcagatacattttcctcactgtaagccttgc
ctggtggggcaggctcctattgtgcagctgtcacagcagatgcagcagcacctcaacatg
caaaaaggcagacttggccatgattggagccagcatagagaccagctgactaatggagag
ctgctggggcataatccaggcctccacaatggacactggacagctcaggacactctcatc
tgtgcaggattgcatctccaacacacaaacactcagcacatggttttcagcaacaaggcc
acagagctggatgggcagtttctccagcaacaaatgcaccaacagttccaacattatcag
cagtcaataacacagaagcagctctccgagcactgtcatgtccaacaaagttcaaccact
ctcaatggaatgtgtgacgccttctccaactggtccacaactaaacctcagtggcaggat
tttgatttcactgaaagtcccggtaacgaaccctgtccagacaacagccagaaaccaatt
acttctttagacttgtgcactaattacagaatggcagaaatgccaaacgtggattccact
gtcagtggaagtgctttgtatgggaaggttggacagcaggacagaagtgagttcacagtt
tcatctttccagcagcagcaagaagagatcgccctcccctccactcagtgccctctcccc
aaaacatccctggagcagatcgtgggagttggaaaaccctgcagtcagccaggccgcagt
gacatgatgagctccgaaattggcaacgacccaagtaacagtaagatgaaaggctgcatc
ctggacacttcctatcctggagactgtgtcaacgagaatggagcagcgccccctgctgtc
aaggtggtcagttctgagactatacctcaagtacctgaatcacaagccagcggcttctac
ctctga
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