Xiphophorus hellerii (green swordtail): 116723779
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Entry
116723779 CDS
T07363
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116723779
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116723779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116723779
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
SR proteins
116723779
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116723779
NCBI-ProteinID:
XP_032424774
LinkDB
All DBs
Position
8:15168550..15173855
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AA seq
245 aa
AA seq
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MSDGRIYVGNLPMDVQERDIEDLFFKYGKIREIELKNNRGTVPFAFIRFEDPRDAEDAVF
GRNGYAYGNSKLRVEYPRSSAAKTGPMGGFGGGGQRGRFGPPTRRSEFRVIVTGLPSTGS
WQDLKDHMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDRTEFRSHQGETSYIRVY
EERGGANWGRSRSRSRSRGRYSPPYFNRGSPPRYPSPPRHPMLRHSPPPRRHPPPHHSPP
PRHYR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggccggatctatgttggaaatctccccatggacgtccaggagagagacata
gaggatctcttcttcaaatatggaaaaatccgagaaatagaattgaagaataacagagga
actgttccttttgccttcatccggttcgaggatccacgggatgctgaggatgctgtcttt
ggaagaaatggatatgcatatgggaactccaagctacgtgtagagtatcctcgatcctct
gctgccaaaactggtccaatgggaggttttggaggaggaggacagagaggaaggtttgga
cccccaactcgaagatccgaatttcgggtcatagtgactgggttaccatctactggaagc
tggcaggatctgaaggatcacatgcgagaagcaggagatgtttgtttcgcagatgtacag
agagatggtgagggcgtagtggagtttctccgtagggaggatatggagtacgctctacgc
cgacttgaccggacagagtttcgttcgcatcagggtgagacctcgtatatccgagtttat
gaggagagaggcggtgccaactggggtcgttcacgttctcgttccagatcccgaggccgc
tattctcctccgtattttaacagaggatctccccctcgctacccgtcacctccacgccat
cccatgttaaggcatagtccacctccgaggaggcaccccccacctcaccatagcccacct
ccacgtcattacagatag
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