Xiphophorus hellerii (green swordtail): 116723803
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Entry
116723803 CDS
T07363
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116723803
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116723803
Transporters [BR:
xhe02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
116723803
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GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_4
Pentapeptide_3
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
116723803
NCBI-ProteinID:
XP_032424847
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Position
8:complement(24742693..24817643)
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AA seq
731 aa
AA seq
DB search
MDEAPNNRTSLAKGAKDIAKEAKRHASKNFNKAVDRASDEYSAQRSYNRFQNEDEDNYNA
YNQPDGQYGDNAANDEDGASSDATEGHDDEDEIYEGEYQGVPASNNEKLRDGQVSLGLKS
LKSQKEQENERQADEEELAQQYELIMQECGHGRFQWQLFFVLGLALMSDGVEVFVVGFVL
PSAETDMCVPNSGAGWLGSIVYLGMMFGAFFWGGLSDKVGRKQCLLISMSVNGFFAFLSS
FVQGYSMFLLCRMVSGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAM
AWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVALTFMPESPRFFLETGKHDEA
WMVLKHIHDTNMRARGEPERVFTVNRIKVPKQLDELVEMPNESANPVVKVLCKIKAELRG
IWLTFMRCFSHPVKENTMKLAAVWFTLSFGFYGLSVWFPDVIKHLQADEYASRVKIHHNE
RIEDFTFNFTLENQIHRNGVFMNDRFLNMKFKAVTFIDSSFINCYFEDVSSVGSSFKNCT
FVDSFFYNTDVDDAKLTNSRVINSSFHHNKTGCQMTFDDDYSAYWVYFVNFLGTLAVLPG
NIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISAWNSLDV
VTTELYPTDRRGTGFGFCNAICKLAAVLGNLIFGSLVGITKAIPILLASAVLVGGGLVGL
RLPDTRSNVLM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcacctaacaacaggacttccttggccaaaggtgccaaggacatcgcaaag
gaagccaagaggcatgcttccaaaaatttcaacaaagccgttgatcgtgcctctgacgaa
tactctgcccaacgcagctacaaccgcttccaaaacgaggatgaggacaactacaatgca
tacaatcagccggacggccaatacggtgacaacgcagccaacgatgaggacggggcgtcc
agcgacgcaaccgagggccacgacgacgaagatgagatctacgaaggagagtaccaaggc
gtgccggcctccaacaacgaaaagctccgggacggccaggtgtctctgggcctaaagagc
ctcaagagccaaaaggaacaggaaaacgagaggcaggccgacgaggaggagctggctcag
cagtacgagctgatcatgcaggagtgtggccacgggaggttccagtggcagcttttcttc
gtgctcggactggcgctcatgtctgacggcgtggaagtgtttgtggtggggttcgtcctg
cccagcgctgagacggacatgtgcgtccccaactctggcgcgggatggctcggcagcatt
gtgtatctgggcatgatgttcggagcgtttttctggggcggcctgtcagacaaggtgggc
cgcaaacagtgcctgctcatatccatgtccgtcaacggcttctttgccttcctctcttcc
tttgttcaaggctacagtatgttcctcctctgccgcatggtgtctggctttgggattggc
ggcgcggtgcccatcgtgttctcgtactttgcggaggtcttggccagggagaagcggggc
gagcacctgagctggctctgcatgttctggatgatcggagggatttacgcctcagccatg
gcctgggccatcatcccacactacgggtggagtttcagcatggggtcagcctaccagttc
cacagctggagagtgtttgtggtggtctgtgcgctgccgtgcgtctccgcagtggttgct
ctcacttttatgcccgagagcccccgcttcttcctggagacggggaaacacgacgaggcc
tggatggttctcaaacacatccacgacaccaacatgcgggcccgaggagagcctgagaga
gtcttcactgtgaacaggataaaagtccccaaacagctggacgagctggtggagatgccg
aacgagtctgccaacccagtggttaaggtcctctgcaagatcaaggctgagctcagaggg
atctggttgacttttatgagatgcttcagccacccagtgaaagaaaacacaatgaagctg
gcagcagtctggttcactttgtcatttgggttttacgggctgtcggtgtggttcccggac
gtcatcaaacaccttcaggctgacgagtacgcctccagagtgaagatccatcacaacgag
cgcattgaagacttcaccttcaacttcacactggagaaccagatccacagaaatggagtc
tttatgaacgacaggtttctcaacatgaagttcaaggcggtgacgtttatagactcgtct
tttatcaactgctattttgaggacgtttcctcagtgggatcctccttcaaaaactgcacc
ttcgtggactctttcttttacaacaccgacgtagatgatgccaagttgacaaattcaaga
gtgatcaacagctccttccaccacaacaaaaccggttgtcagatgacgtttgacgacgat
tacagcgcctactgggtctacttcgtcaacttcctgggaacgctggccgtgttgccgggg
aacatcgtttccgctctcctcatggacaagatagggcgcctcagcatgttaggaggctcc
atggtgctatcaggaatcagctgcttttttctttggttcggcacctctgagtccatgatg
atcttcatgctctgtctctacaacggtctcagtatctctgcgtggaactccctggatgta
gttaccactgagttgtaccctacagacaggaggggcacaggatttggcttctgtaacgcc
atatgtaagttggcagcagttcttggcaacctgatttttggctccctggttggcatcacc
aaggcaattcctattctcctggcgtcagctgttttggttggtggtggactggtgggcctc
cgactaccagacacacgttccaacgtcctcatgtga
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