Xiphophorus hellerii (green swordtail): 116723839
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Entry
116723839 CDS
T07363
Name
(RefSeq) tropomyosin beta chain
KO
K10374
tropomyosin 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04260
Cardiac muscle contraction
xhe04261
Adrenergic signaling in cardiomyocytes
xhe04814
Motor proteins
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116723839
04820 Cytoskeleton in muscle cells
116723839
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116723839
04261 Adrenergic signaling in cardiomyocytes
116723839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116723839
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
116723839
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
PUMA_CC
ATG16
Laminin_I
XhlA
TMF_DNA_bd
ERM_helical
Crescentin
CENP-F_leu_zip
SlyX
Nuf2_DHR10-like
Exonuc_VII_L
DUF1664
DUF745
GAS
FPP
MscS_porin
DUF7169
DUF16
DUF5917
Fib_alpha
DUF6317
AAA_13
Fez1
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
116723839
NCBI-ProteinID:
XP_032424921
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Position
8:28875116..28891182
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AA seq
284 aa
AA seq
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MEAIKKKMQMLKLDKENAIDRAEQAEVDKKGAEDKCKQLEEELLGLQKKLKGVEDELDKY
SESLKDAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERSE
ERAEVAEAKSADLEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTEKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaaaatgcaaatgctgaagctggataaggagaatgcgatagac
cgggcagaacaagcagaggttgacaagaagggagccgaggacaaatgcaaacagctggag
gaggagctgctgggcctgcagaagaaactcaaaggagtagaagatgagctggacaaatac
tctgagtctctgaaggatgcccaggagaagctggagcaagcagagaaaaaggcaacggat
gcggaggcagaggtggcgtctctgaatagacgcatccagctggtggaagaggagttggac
cgagctcaggagaggctagctactgctctgcagaagctggaggaggcagagaaagccgca
gatgaaagcgagagaggaatgaaggtgatagagaacagagcaacaaaagatgaagagaaa
atggaaatccaggagatgcagctgaaggaggccaaacacattgctgaggaggcggaccgt
aaatatgaagaggttgcacgtaaactggtgattctggagggagatctggaacgctcagag
gagcgtgctgaggtggctgaggctaaatcagctgaccttgaggaagaattgaaaaatgtc
accaacaacttgaagtccctggaagcccaggctgagaagtactcacaaaaagaggacaaa
tatgaagaagagattaaagtgcttacagagaagctgaaggaggctgaaacccgggcagag
tttgcagaaaggtctgtggctaagctggagaagacgattgatgatctagaagatgaagtg
tatgctcagaagctgaagggcaaggctctcagtgaggagctggacctggccctcaacgac
atgactacactgtag
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