Xiphophorus hellerii (green swordtail): 116723868
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Entry
116723868 CDS
T07363
Symbol
prdm12
Name
(RefSeq) PR domain zinc finger protein 12
KO
K24255
PR domain zinc finger protein 12 [EC:2.1.1.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116723868 (prdm12)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116723868 (prdm12)
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GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_2
zf-met
zf-C2H2_15
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-Di19
CBM_3
DUF7066
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
116723868
NCBI-ProteinID:
XP_032424940
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Position
8:complement(16608350..16612379)
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AA seq
375 aa
AA seq
DB search
MGSVLPADALALKPGFKCSGRSLSDVITSDILHSFLYGRWRNVLGEHLAEERQSGSSPKT
AFTAEVLAQSFAGEVQKLSSLVLPSEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRL
LSPEHVDLFKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIG
SSIFYKAVETIPPDQELLVWYGNTHNTFLGIPGVPGMDEEHQKKSRNDDSHSTEGPSLCS
PPSVAVTSTGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVR
LHTGERPYKCHVCQSAYSQLAGLRAHQKSARHKPVAHASDAPPQVSPPPPPPPAPQIAAM
QHQMPLVHHIPTMVL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgtgctgcccgccgacgctctggctctgaagcccggatttaagtgctccggc
cgctcgctgtcggacgtgatcacctcggacatcctgcacagcttcctgtacggcaggtgg
aggaacgtgctgggcgaacacctggcggaggagcggcagagcggcagcagccccaagacc
gccttcacggcggaggttctggcccagtccttcgctggagaggtgcagaagctctccagc
ctggtgcttcccagcgaggtgatcatcgcccagagctccatcccgggagaaggcctgggg
atcttctccaagacctggatcaaagccggaacagagatgggccccttcacagggagactc
ctgtcccccgaacacgtggacttgttcaagaacaacaacctgatgtgggaggtgttcaat
gaggacggcacggtgcggtacttcatcgatgccagccaggaggaccaccgcagctggatg
acctacataaagtgcgctcggaacgagcaggagcagaacctggaggtggtgcagatcggc
agcagcatcttctataaagcagtggagaccattccgcctgaccaggagctccttgtctgg
tatggaaacacgcacaacacattcctgggaattcctggagttcctgggatggatgaagaa
caccagaagaaaagcaggaatgacgactcccactccaccgaggggccctctttgtgttct
cctccttccgtcgccgtcacctccacgggccggatgcgctgcgtcatctgccaccgcggc
ttcaactcccgcagcaacctgcgctcccacatgcgcatccacaccctggacaagcccttc
gtgtgccgcttctgcaaccgccgcttcagccagtcgtccacgctgcggaaccacgtccgc
ctgcacaccggcgagcggccgtacaagtgccacgtctgtcagagcgcgtactcccagctg
gcgggcctgagggcgcaccagaagagcgcacggcacaaacctgtggcgcacgcctccgac
gcgcccccgcaggtttcccctccccctcctcctccacctgcgccgcagatagccgccatg
cagcatcagatgcctctggtccaccacattcccaccatggtgttatga
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