Xiphophorus hellerii (green swordtail): 116723882
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Entry
116723882 CDS
T07363
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04210
Apoptosis
xhe04517
IgSF CAM signaling
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116723882 (sptan1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116723882 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116723882 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116723882 (sptan1)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116723882 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
116723882 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
EF-hand_FSTL1
SH3_10
SCO1-SenC
AIDA
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
116723882
NCBI-ProteinID:
XP_032424965
LinkDB
All DBs
Position
8:612735..636660
Genome browser
AA seq
2479 aa
AA seq
DB search
MDTVGVKVLETAEDIQERRQQVLDRYRRFKDLSMVRRQKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAAAIIELDKTGNLMITEGHFASETI
RSRLEELHRLWDLLLQKTKEKGMRLLQAQKLLQYLRECEDALDWISDKEAIVTSEELGQD
LEHVELLQKKFEEFQTDLAAHEERVNEVNQLAGKLIQEAHPENELIVRKQEEVNAAWQRL
KGLALQRQTRLFGSAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKQEGL
ERDLAALKDKVNTLGGDAERLQQTHPQNASQIHLKKDELITNWEQIQTLAAERHARLNDS
YHLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRAT
DEAGQALLSAGHYASEEVKEKLGILAQEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNSHYA
KEDVATRRDALLNRRNALHERAQARRAALEDSFHLQQFFRDSDELKSWINEKMKTATDES
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDRKHYASAEVTARMEDVSAQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIQKKQEALVVRYEALREPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIASSTNRGKDLIGVQNLLKKHQALQAEITGHEPRI
KAVTQKGETMVEEGHFAGEEVKAKLGELHGRWDTLKGKAGQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLTAYGSSIQALKEQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEHGSIAARQEQIENQLVTKEPCSVSVRMKQVEELYGTLLELGE
KRKDMLEKSCKKFMLFREANELQQWIHEKESALTNEEVGSDLEQVEVLQKKFDDFQKDLK
ANESRLRDINKVASELESEGLMAEEAPMVQAQQQEQLGSAPGKDESDSKTASPWKTIRLG
VQTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALNT
DNYGHDLASVQALQRKHEGFERDLAALGDKVKSLGETAERLIQSHPEAVDDIQEKCTELN
TAWSSLVGRADQRKEKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALL
ERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPDIQQKLKALDQERADLEKAWVQRR
MMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQE
EKIAALQSFADQLIGADHYAKPEIYNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSR
DVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIKGVIDTG
NALIQRGACAGSEDAVKARLNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFW
LSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMASNAFDTS
QVKDKRDAVNGRFAKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVGSEDYG
RDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVDHWK
ELKDLSGARGKRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHE
AFETDFTVHRDRVGDVCANGEELIKKNNHHVDNISAKMAALRGKVSELERAAAQRKAKLD
ENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGI
TNITALKDQLLAAQHVQSKAIEARHAALIKRWNQLLSNSAARKKKLLEAQDHFRKVEDLF
LTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHEAFRSSLSSAQTDFNQLAEL
DQQIKSYQVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQH
ANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAME
EALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFK
HFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGNVSLQEYMA
FMISRETENVKSSEEIESAFRALSAENKPYVTKEELYQNLTKEQADYCLSHMKPYLDSKG
RELPSAFDFVEFTRSLFVN
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggacacggtcggagtcaaagtgctggaaacggccgaagacatccaggagcgccggcag
caggttctggaccggtaccggcgcttcaaggatctgtccatggtccggcgccagaagctg
gaggattcgtaccgattccagttcttccgccgggacgccgacgagttggagaaatggatc
caggagaagctgcagatcgcctctgacgagaactacaaggacccgtccaacctgcagggg
aagctgcagaagcaccaggcgtttgaggccgaggtccaggccaacgcggcggccatcatc
gaactggacaagacggggaacctgatgatcaccgagggacacttcgcctccgagaccatc
cggagccgcctggaggaactgcaccgcctctgggacctgctgctgcagaagaccaaggag
aagggcatgcggctgctgcaggcccagaaactgctgcagtacctgcgggagtgtgaagac
gctctggactggatcagcgacaaggaggccatcgtgacctctgaggagctgggtcaggac
ctggagcacgtggagctcctgcagaagaagtttgaggagttccagacggaccttgcggct
catgaggagcgcgtgaacgaggtgaaccagctggccgggaagctgatccaggaggcgcac
ccggagaacgagctgatcgttaggaagcaggaggaggtgaacgcggcctggcagcgcctg
aagggcctggctctgcagaggcagacccggctgttcggctcggccgaggtgcagcgcttc
aacagagatgtggatgagaccatcagctggatcaaggagaaggagcagctgatggcgtcc
gatgactttgggcgggacttggccagcgttcaggctctgctgaggaaacaggagggtctg
gagcgagacctggcggctctgaaggacaaggtgaacactctgggtggggacgccgagcgc
ctgcagcagacccatcctcagaacgcttcccagatccacctgaagaaagatgaactcatc
accaactgggagcagatccagacgctggctgctgagcgccacgcccgcctcaacgactcc
taccatctgcagcgtttcaccgctgacttcagggatctgaccagctgggtgacggagatg
aaggctctgattaatgccgacgagctggccaacgacgtggccggagccgaggctctgctg
gaccggcaccaggagcacaagggggaaatcgatgcccacgaggacagcttcagggccaca
gatgaagctggtcaggccctgctcagtgcaggacactacgcctccgaggaggtcaaggag
aagctggggatcctggcccaggagaaggagtccctcctggagctgtgggaggtccgccgg
cagcagtacgaacagtgcatggacctgcaactgttctacagggacacggagcaggtggac
aactggatgagcaagcaggaggctttccttctgaacgaagacctgggagactccctggac
agcgtggaagctctgctgaagaaacacgaggactttgagaagtctctcagcgctcaggag
gagaaaatcacggctctggatgaattcgccaccaagctgatccagaacagccactatgct
aaggaggacgtggcaacacgcagagacgctctcctcaaccgcaggaacgccctgcatgag
cgtgctcaggcccgccgggccgccctggaggactccttccacctgcagcagttcttcagg
gactccgatgagctgaagagttggatcaacgagaaaatgaagactgctacagatgagtcc
tacaaggacccgtccaacctgcaggggaaggtgcagaaacaccaggccttcgaggccgag
ctgtcagccaatcagagccgcatcgacgccctgcagaagtccggccaggagctgctggac
aggaagcactatgcctccgctgaggtcaccgcccgcatggaagatgttagcgcgcagtgg
aagaagctgctggaggccacagagctcaaaggtatcaagctgcgggaggccaaccagcag
cagcagttcaacaggaacgtggaggacattgagctctggctctatgaggtggaaggccac
ttggcctctgacgactatgggaaagacctgacgagtgtccagaacctgcagaagaagcat
gccctgctggaggccgacgtggcagctcaccaggatcggatcgacggaatcaccatccag
gctcggcagttccaggaagccggccactttgacgcagacaacatccagaagaagcaggag
gctctggtggttcgctatgaagctctacgggagccgatggcggctcgcaagcagaagctg
tctgactcgctgcgcctgcagcagctcttcagggacgtagaggacgaggagacctggatc
agggagaaggagcccatcgcctcatccaccaacagaggtaaagaccttattggagtccag
aacctgctgaagaagcaccaggctctgcaggctgagatcacaggtcacgagcctcggatc
aaagccgtgacccagaaaggagaaaccatggtggaggaaggtcactttgccggggaggag
gtgaaggccaagctgggggagttgcacggacgttgggacaccttgaagggcaaggcgggg
cagaggaggcaggacctggaggactccctgcaggcccagcagtactttgccgacgccaac
gaggccgagtcttggatgagggagaaggagcccatcgtcgggagccctgactatgggaaa
gacgaggattcagctgaggcactgctgaagaagcacgaggccctgatgtcagatctgacg
gcgtacggcagcagcatccaggctctgaaggagcaggctcagtcctgcaggcaacaagtg
gctccgactgatgacgagactgggaaggagctggttctggctctgtacgactatcaggag
aaaagcccgcgcgaagtgactatgaagaagggtgacatcctgaccctgctcaacagcacc
aacaaggactggtggaaggtggaggtgaacgaccggcagggctttgttccggccgcctat
gtgaagaagttggacccgactcagtcgtcttccagggagaacttgctggacgagcatggc
agcatcgcagctcgacaggaacagatcgagaaccagctcgtcaccaaggagccctgcagc
gtgtctgtgcgcatgaagcaggtggaagagctgtacggcacgctgctggagctgggggag
aagaggaaggacatgctggagaagagctgcaagaagttcatgttgttccgcgaagccaac
gagctccagcagtggatccacgagaaggagagcgccctgaccaacgaggaggtcggctcc
gacctggagcaggtcgaggttctgcagaagaagttcgacgacttccagaaggacctgaag
gccaacgagtcccggctgagggacatcaacaaggtggcgtcggagctggagtctgaaggc
ctgatggcggaggaggctcccatggtccaggcccagcaacaggagcagctgggatccgct
ccgggaaaggacgagtctgactccaagacggcttcgccctggaagaccatacgactgggt
gtccaaacgacggctaactttaataccatcaaggagctgaacaaccgctggcgctcgctg
cagcagctggccgaggaccgcagcaacatgctgggcagcgcccacgaggtgcagcgcttc
cacagggacgccgacgaaaccaaggagtggatcgaggagaagaaccaggcgctgaacacg
gacaactacggccacgacctggccagcgtccaggcgctgcagcgcaaacacgaaggcttc
gagagagacctggcggcgctgggcgataaggtgaagtctctgggcgagacggcggagcgt
ctgatccagtcgcacccggaggccgtggacgacatccaggagaaatgcacggagctgaac
acggcgtggagcagcctggtgggccgcgccgaccagcgcaaggagaagctgggcaactcc
cacgacctgcagcgcttcctgtccgacttcagggatctgatgtcgtggatcaacgggatc
cgaggcctggtgtcgtccgaggagctggctaaagacgtgacgggcgccgaggcgctgctg
gagcgccaccaggagcaccggacggagatcgacgcgcgggccgggaccttccaggccttc
gagcagttcggccagcagctgctggcgcgcggccactacgccagccccgacatccagcag
aagctgaaggctctggaccaggagcgcgccgacctggagaaggcctgggtgcagcgccgc
atgatgctggaccagtgcctggagctgcagctcttcaaccgggactgtgagcaggccgag
aactggatggcggcgcgggaagccttcctggccagcgacgacaagggcgactcgctggac
agcgtggaggcgctcatcaagaagcacgaggacttcgacaaggccatcaacgtccaggag
gagaagatcgccgctctgcagtcctttgctgaccagctgatcggagccgatcattacgcc
aagccggagatctacaaccgccgcaacgaggttctggacaggtggcgccggctgaaggcc
cagatgatcgagaagcgctccaagctgggcgagtcccagacgctgcagcagttcagccgg
gacgtggacgagatcgaggcctggatcagcgagaagctgcagaccgccaccgacgagtcc
tacaaggaccccaccaacatccagctgtccaagctgctgagcaaacatcagaagcaccag
gcgtttgaggcggagctgcacgccaacgccgaccgcatcaaaggagtcatcgacacgggg
aacgccctgatccagagaggagcctgcgccggcagcgaggacgccgtcaaggcgcggctc
aacgctctggacgagcagtggcagttcctcgtcaacaaatcagcagagaagagtcagaag
ctgaaggaggccaacaagcagcagaacttcaacaccggcatcaaggactttgatttctgg
ttgtctgaggtcgaagctcttctggcctccgaggattacggcaaagacctggcttcagtc
aacaacctgctgaagaaacaccagctgctggaggccgacatctctgctcacgaggaccgt
ctgaaggacctgaacggccaggccgacagcctgatggccagcaacgccttcgacacctcg
caggtgaaggacaagcgcgacgccgtcaacggccgcttcgccaagatcaagagcatggcc
gccggccgccgcgccaagctcaacgagtcgcaccgcctgcaccagttcttccgggacctg
gatgacgaggagtcctggatcaaggagaagaagctgttggtcggatcggaggattacgga
cgtgatttgacgggagttcagaacctgaggaagaagcataagaggctggaagccgagctg
gcggcgcatgagccggctatccagtctgtgctggacaccgggaagaagctgtctgatgac
aacaccatcggtcaggaggagatccagcagaggctggcccagttcgtggaccactggaag
gagctgaaggatttatctggagccagagggaagaggctggaggagtcgctggaataccag
cagtttgtggcgaacgtggaggaggaggaagcttggatcaatgagaagttgaacctggtt
ggaagcgaagactacggagacacgctggcggcggtgcagggcctgctgaagaaacacgaa
gcgtttgagacggacttcacggtccaccgggatcgggtcggcgacgtctgcgccaacgga
gaggagctcatcaagaagaacaaccaccacgtggacaacatcagcgccaagatggccgcc
ctgagagggaaggtgtcggagctggagcgggcggcggcccagaggaaggccaagctggac
gagaactcggcgttcctgcagttcaactggaaggccgacgtggtggagtcctggatcggt
gagaaggagaacagcctgaagaccgacgactacggcagagacctgtcctcggtccagaca
ctgctcaccaagcaggagacgtttgacgccggcctgcaggccttccagcaggaaggaatc
accaacatcacggcgctgaaggaccagctgctggccgcgcagcacgtccagtccaaggcc
atcgaggcgcggcacgccgccctcatcaagcgctggaaccagctgctgtccaactcggcg
gcgcggaagaagaagctgctggaggcgcaggaccatttccgcaaggtggaggacctcttc
ctgaccttcgccaagaaggcctcggccttcaacagctggttcgagaacgccgaggaggac
ctgaccgacccggtccgctgcaactccctggaggagatccgggcgctgcgcgaggcccac
gaggcgttccgctcctcgctgagctcggcccaaaccgacttcaaccagctggccgagctg
gaccagcagatcaagagctaccaggtggcgtccaacccctacacctggttcaccatggag
gccctggaggagacctggaggaacctgcagaagatcatcaaggagagagagctggagctg
cagaaggagcagaggaggcaggaggagaacgacaagctgcggcaggagttcgctcaacac
gccaacgccttccaccagtggctgcaggagaccaggacgtatcttctggacgggtcctgc
atggtggaagagtccggaaccctggagtctcagctggaggccaccaagcggaagcaccag
gagatccgggcgatgcgcagccagctgaagaagatcgaggatctgggggcggccatggag
gaagctctgatcctggacaacaaatacacggagcacagcaccgtggggctggcccagcag
tgggaccaactggaccagctgggcatgaggatgcagcacaacctggagcagcagatccag
gcccgaaacacgaccggcgtgacggaggaggcgctgaaggagttcagcatgatgttcaag
cacttcgacaaggagaagtcgggccgcctgaaccaccaggagttcaagtcgtgtctgcgc
tcgctgggctacgaccttcccatggtggaggaaggagaacccgacccggagtttgaggcc
atcctggacacggtggaccccaacagggacgggaacgtgtcgctgcaggagtacatggcc
ttcatgatcagccgggagacggagaacgtcaagtcgagcgaggagatcgagagcgccttc
cgggcgctgagcgccgagaacaaaccctacgtcaccaaggaggagctgtaccagaacctg
accaaggagcaggccgactactgcctgtcgcacatgaagccgtacctggacagcaagggc
cgcgagttgccgtcggcgttcgacttcgtggagttcacgcgctcgctgttcgtcaactga
DBGET
integrated database retrieval system
