Xiphophorus hellerii (green swordtail): 116723953
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Entry
116723953 CDS
T07363
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116723953 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116723953 (myo5b)
04131 Membrane trafficking [BR:
xhe04131
]
116723953 (myo5b)
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116723953 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116723953 (myo5b)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116723953 (myo5b)
mRNA cycle factors
P-body specific factors
116723953 (myo5b)
Membrane trafficking [BR:
xhe04131
]
Others
Actin-binding proteins
Myosins
116723953 (myo5b)
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116723953 (myo5b)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116723953 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
116723953
NCBI-ProteinID:
XP_032425079
LinkDB
All DBs
Position
8:complement(322714..350460)
Genome browser
AA seq
1821 aa
AA seq
DB search
MASDYNPYCKLTRVWVPDPDDVWKAAEITRDYKEGEAVLHLQLEDGTPLEYQVGPKANAL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNNIYTYCGIVLVAINPYEQLQIY
GEEVITAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSSSDANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANM
RTYLLEKSRVVFQAEEERNYHIFYQLCASASLPEFKDLSLMSAEDFTYTSLGENIFIEGV
NDADDFKKTREAFTLLGIKESSQSNIFKIMASILHLGNVEIVSERDGESCHVARNDVHLQ
HFCRLLGVELKQMDHWLCHRKLATASETFVKTMSCQQAINARNALAKHIYAHLFDWIVEH
INKALHTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQDEYM
KEDIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSSSGHFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASEFQLVADLFQDKSDAP
PSKASKVNVRSLKTVPKVPNKEHRKTVGHQFRSSLHLLMDTLNATTPHYVRCIKPNDLKE
AFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYWVLMRKSDLTSADKKQVC
KNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRTDKFRSACIKIQKTVRGWLQRIRYR
RVRRAAIGLQRYGRGYLARRYAEFLRQNRAALICQKQYRMVRERRKFLRIRRATVTIQAY
ARGMFTRRIFWEFMLHHKAMLIQKHVRGWLQRKKFRQALDAAIIIQCAFRRMQAKRQLKQ
LKIEARSAQHLKKLNTGMENKIVQLQRKMDEQSKELKTQNEQLVTANASLGSEVTKLQKQ
LEQVRSQQPDGGQVESLQEEVERLREELQEAQAHRKRMEEEHGNEKLSLSQRVEELEAEN
ALLKVEKDELNRRIQQQTMNSAAKESSASLEMELNQLRERYQDLIKEYSRLERRYDNLKE
EMDLSKFQPGHHRNPSNQSSLESNSNYSSVDKYVGETDDSIQQVKEMGVENAAMDISLFM
KLQIRVRELETERKRLQVNLDKMEEQAKCKGPEPKTPTSDVATGDLVYNNLKRQELETEN
KKLKNDLNELRKTIAERATQDGLSNELQDEYNLLLSQLKSANEELDARKEEVLILRTQIV
SNAEKNSEPNESEVDGGLNSSKEPLDKEEALKAYHGLCESKKLLEAQLQTQTRQHRDELE
ALHTQIELLKDDLEKKQELLNYMSTLSPEAKVDYTVQQELTRLTNSNLELKGMVEKMEKN
ERKLRKQLRIYMKKVQELAAQAAAHDVDQNKDEKNKMIQKDIRMTKVKNFEGMLEYLKED
EARLIKTLITDIQPSMVSATVPCLPAYILFMCIRHADYINDDQKVISLLTSSINAIKKVL
KRNNDDFEMISFWLANSSRLLHCLKQYSGEEAFMTQNTTKQNEHCLKNFDLAEYRQILSD
LSIQIYQQLIKVAQGIIQPMIVSAMLESESIPSLAGVKSMGYRNRSSSMDTDADGPTTYT
LQGLIRQLSQFNSIMRDHGLDPEVVGQVARQLFHCINAFTLNNLLLRKDICSWSTGMQLR
YNTSQLEEWLRANNLFQSKASATLEPIIQAAQLLQVKKKTSQDAEAICSLCTALTVQQIV
KILNLYTPLNEFEERVTVSFIRNVQSVLQERNDPPQLLLDTKHTFPVLFPYAPSALSLEA
VRIPPSLGLDFLVRSGPTPSD
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattataacccctactgtaagctgacccgggtctgggtcccggacccggac
gatgtgtggaaagctgcagaaatcaccagggactacaaggagggcgaggcggttctgcac
ctgcagctggaggacgggacgcccctggagtaccaggtgggtccgaaggccaacgctctg
ccgttcctcaggaatcccgacatcctggtgggggagaacgacctgacagctctcagctac
cttcatgaacccgccgtgctgcacaacctgagggtccgcttcctggagtccaacaacatc
tacacctactgcggtatcgtcctggtggccatcaacccgtatgagcagctgcagatctat
ggggaggaggtgatcaccgcctacagcggtcagaacatgggggacatggatcctcacatc
ttcgccgtggctgaggaagcgtacaaacagatggccagagacgagaagaaccagtcaatc
attgtgagcggagaatctggagcaggaaagactgtttcggcaaagtacgccatgagatac
tttgccacggtgggcggctcctccagcgacgctaacgtggaggagaaggttctggcctcc
aaccccatcatggaggccatcgggaacgccaaaaccaccagaaacgacaacagcagccgc
ttcggcaagtacattcagatcggcttcagcagacattaccacatcattggagccaacatg
aggacctacctgctggagaaatcccgcgtcgtcttccaggctgaagaagagaggaactac
cacatcttctaccagctatgcgcctcagccagcctgccagagttcaaagacctcagtctc
atgagtgcagaagatttcacctacacgtctctaggagagaacatcttcatcgagggagtt
aacgatgctgacgacttcaagaagaccagagaggctttcacactgctgggcataaaggag
agcagtcagagcaacatctttaagatcatggcctccatccttcaccttggcaacgtggag
atcgtctctgagcgggacggagagtcctgccatgtcgcaaggaacgacgtccacctgcag
cacttctgcagattgctgggtgtggagctgaagcagatggaccactggctctgccaccgg
aagctggccaccgcctctgagacgttcgtgaagaccatgtcctgccagcaggccatcaac
gcccgcaacgccctcgccaagcacatctatgcccacctcttcgactggatcgtggagcac
atcaacaaggcgctgcacacctccagcaagcagcactccttcatcggggttctggacatc
tacgggttcgagacattcgaggtgaacagctttgagcagttctgcatcaactacgccaac
gagaagctgcagcagcagttcaactcgcatgtcttcaaactggagcaggacgagtacatg
aaggaggacattccctggacactcatcgacttctacgacaaccagccctgcatcgacctg
atcgaggcccggctcggcatcctggacctgctggacgaggagtgcaaggttccgaaggga
acggatcagaactgggcccagaagctctacaagcagcactccagcagcgggcacttccag
aaacccagaatgtccaacacgtccttcatcatcatccacttcgctgacaaggtggagtat
cagtgcgaaggcttcctggagaagaacagagacactgtctacgaggagcagatcaacatc
ctgaaagccagcgagttccagctggttgctgatctgttccaagacaagagcgatgctccg
ccctccaaagcctccaaggtgaatgtccgctccctgaaaacagttcccaaagtccccaac
aaggagcacaggaagactgtgggacaccagttccgctcgtcgctccacctgctgatggac
accctgaacgccacgacgccgcactatgtacgctgtatcaagccgaacgacttgaaggag
gccttctcgttcgactcccggcgggccgtgcagcagctccgggcctgcggggttctggag
acgatccggatcagcgccgctggatacccgtccaggtggacctatcccgacttcttcagc
cggtactgggttctgatgagaaagtcagacctgacgtcagcagacaagaagcaggtgtgc
aagaacctcctggagacactgatcaaggaacccgacatgttccagttcgggaagacgaag
atcttcttccgggccggccaggtggcctacctggagaagcttcggaccgataaattccgc
tctgcctgcatcaagatccagaagacggtccgcggctggctgcagaggatccggtaccgc
cgggtccgccgggccgccataggcctgcagagatatggccgaggttacctggcccgcagg
tatgcagagttcctgcgtcagaaccgggccgccctgatctgtcagaaacagtaccgcatg
gtccgagagcggaggaagttcctgaggatccggcgggccacggtcaccatccaggcctac
gcccgaggcatgttcacccgcaggatcttctgggagttcatgctgcaccacaaggccatg
ctgatccagaagcacgtgcgcggctggctgcagaggaagaagttcaggcaggcgctcgac
gccgccatcatcatccagtgcgccttcaggaggatgcaggccaagcggcagctgaagcag
ctgaagatcgaagcgcgttccgctcagcacctcaagaagctcaacacgggcatggagaac
aagatcgtccaactgcagaggaagatggacgagcagtccaaggagcttaagacccagaac
gagcagctggtgacggcgaatgcctcattgggatcagaggtcaccaagctgcagaagcag
ctggagcaggtccgcagccagcagcctgacggaggccaggtggagtcgctgcaggaggaa
gtggagaggctgcgggaggagctgcaggaggcgcaggcccacaggaagaggatggaggag
gagcacggcaacgagaagctcagcctgagccagcgggtggaggagctggaggcagaaaac
gctctgctgaaggtggagaaggacgaactgaaccgacggatccagcagcagaccatgaac
tctgcagctaaggagagcagcgcctccctggagatggagctgaaccagttgcgggagcgg
taccaggacctaatcaaggagtactccaggctggagcggagatacgacaacctgaaggag
gagatggatctgagcaagttccaacccggccaccacaggaacccgtccaaccagagcagc
ctggagtcgaactctaactactcctctgtggacaaatatgtcggagagacagatgactcc
atccagcaggtgaaagagatgggagtggagaacgctgccatggacatcagcctgttcatg
aagctgcagatacgagtgagggagctggagacggagaggaagaggctgcaggtcaacctg
gacaagatggaggagcaggccaagtgcaagggtccggagcccaagaccccaacgtctgat
gtggcaacaggagatctggtctacaacaacctgaagagacaggagctcgaaactgagaac
aagaaactgaagaacgacctgaacgagctgaggaagaccatcgccgagcgggcgacgcag
gacggcttgtccaatgagctgcaggacgaatacaacctgctgctcagtcagctgaagtca
gccaatgaggagctggacgcccggaaggaggaggtgctcatcctcaggactcagatcgtc
agcaacgccgagaagaacagcgaacccaacgaaagtgaggtggacggaggactgaacagc
agcaaggagccgctggacaaagaggaggccctcaaagcgtaccatggactgtgtgagtcc
aagaaactgctggaggcccagctgcagacccaaacccggcagcaccgggacgagctggag
gctctgcacacccagatcgagctgctgaaggacgacctggagaagaagcaggagctgctc
aactacatgtccactctgtcccccgaggccaaggtggactacaccgtccagcaggagctc
acacggctcaccaacagcaacctggaactcaagggcatggtggagaaaatggagaagaac
gagaggaagctgaggaagcagctgaggatctacatgaagaaggtccaggagctggcagct
caagcagcggctcacgatgtcgatcagaacaaggatgaaaagaacaagatgatccagaaa
gacatccggatgaccaaggtcaagaacttcgaggggatgctggagtacctgaaggaggac
gaggcccggctcatcaagaccctcatcacagacatccaacccagcatggtgtcggccacc
gtcccctgcctccccgcctacatcctcttcatgtgcatccgccacgccgactacatcaac
gacgaccagaaggtcatctctctgctcacctccagcatcaacgccatcaagaaggtcctg
aagaggaacaacgacgactttgagatgatctcgttctggttggccaacagcagccgcctg
ctgcactgcctgaagcagtacagcggtgaggaggccttcatgacccagaacacgaccaaa
cagaacgagcactgcctgaagaactttgacctggccgagtaccggcagattctgagcgac
ctgtccatccagatctaccagcagctcatcaaggtggcccagggcatcatccagcccatg
atcgtgtcggccatgttggagagcgagagcattcccagcctggccggagtcaagtccatg
ggctacaggaaccgctcgtccagcatggacacggacgcggacgggcccaccacctacacc
ctgcagggcctcatccggcagctcagccagttcaacagcatcatgagggaccacggactg
gaccccgaggtggtgggccaggtggcccgccagctcttccactgcatcaacgccttcacc
ctcaacaacctgctgctgcgtaaggacatctgctcctggagcacgggcatgcagctcagg
tacaacaccagtcagttggaggagtggctgcgagccaacaacctgttccagagcaaagct
tcggctacgctggagcccatcatccaggccgcccagctgctgcaggtcaagaagaaaacg
tctcaggacgccgaggccatctgctcgctgtgcacggctctgaccgtgcagcagatcgtg
aagatcctgaacctctacacgcctctgaacgagtttgaggagcgagtcaccgtgtccttc
atcagaaacgttcagagcgtcctccaggagaggaacgacccgccgcagctgctgctggac
accaagcacaccttccccgtcctgttcccctacgccccgtccgccctcagcctggaggcc
gtgcgcatccccccctccctggggctggacttcctggtccggtccggccccaccccctca
gactga
DBGET
integrated database retrieval system
