Xiphophorus hellerii (green swordtail): 116723969
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Entry
116723969 CDS
T07363
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04068
FoxO signaling pathway
xhe04110
Cell cycle
xhe04120
Ubiquitin mediated proteolysis
xhe04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116723969 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116723969 (skp2)
04150 mTOR signaling pathway
116723969 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116723969 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116723969 (skp2)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116723969 (skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_NXF1-5
LRR_14
LRR_R13L1-DRL21
LRR_4
LRR_9
DUF3557
Motif
Other DBs
NCBI-GeneID:
116723969
NCBI-ProteinID:
XP_032425111
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Position
8:complement(554727..559680)
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AA seq
452 aa
AA seq
DB search
MTRHYVMKTGACAVAAGLKSPGLERREKRLGEIRDLTAGLSGLLRNSGMSEDSLPLQELS
CQKRFGIKRKSLGSESTPTDLVLLRSPRPKQPWPACLGKENREGRFVLARRSRRRWRSNS
GVSWDHLPDELLLRICGCLPLPDLLRVSAVCRRWRRLALDESLWVSVDLEGLTQTGPALR
LVLSTGVQRLRCPRAFVEEPDLSEPGRLQLVDLDLSGSVVSPSALRSVVCRCSRLRRLSL
EALPLSDDVLSCLAQNPDLLQLNLGGCSGFSAAALAATLGSCHRLEQLNISWCSFSRNHV
QNLVETLSPSVTHLNLSGYRDSLVLDDVKVLVDRCPDLQTLDLSDSTLLTADSFLVLKRL
KKLLHLSLSRCYHIHLAALCDLGKAIPSLRFLDVFGLVQDGQLVALQDDSPRLAINARPF
SSVARPTPAGPVGAAQPDRSMWGRGCRLKVRF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtcactacgttatgaaaacaggcgcgtgtgcggtggcggcaggtttaaagagt
ccaggtttggagcgcagagagaaacgtctgggtgaaatccgggatttaacggcgggatta
tcgggattactgaggaacagcgggatgtcggaggacagccttcccctgcaggagctctcc
tgccagaagcggttcggcatcaagcggaagagcctcggttccgagtccactccgaccgac
ctggtgctgctgcgctccccgcggcccaagcagccctggccggcctgcctgggcaaggag
aaccgggagggccggttcgtcctggcccggaggtcccggaggaggtggcggtccaactca
ggtgtttcctgggatcacctgccggacgagctgctgctgcggatctgcggctgcctgccg
ctgccggacctgctgcgggtttctgcggtttgccgccgctggcgccgcctggcgctggac
gagtccctgtgggtcagtgtggacctggagggcctgacccaaacgggcccggctctgcgt
ttggttctgagcaccggggtccagaggctgcgctgcccgcgggcgtttgttgaggaaccg
gacctctcagaacccgggcggctccagctggtggatctggacctgtccggttccgtggtt
tctccctcggcgctgcgcagcgtcgtctgccgctgcagccggctgcgccgcctcagcctg
gaggcgctgccgctgtccgacgacgtcctcagctgcctggctcagaacccggacctgctg
cagctcaacctgggcggctgctccggtttctccgccgccgctctggccgccacgctgggc
tcctgccacaggttggagcagctcaacatctcctggtgcagcttcagcaggaaccacgtc
cagaacctggtggagaccctgagcccctccgtcacacacctcaacctgagcggctaccgg
gacagcctggtgctggacgatgtgaaggttctggtggaccgatgtccggacctgcagaca
ttggatctcagcgacagcacgctgctgacggccgacagcttcctggttctgaagcggctg
aagaagctgctccacctgtcgctgagccgctgctaccacatccacctggcggcgctgtgt
gaccttgggaaggcgatcccgtccctgcggttcctggacgtgttcggcctggtccaggac
ggccagctggtggcgctgcaggacgactcgccgcgactcgccatcaacgcccggccgttc
tcctccgtggcccggcccactccggccggcccggtcggcgccgcccagcccgaccgcagc
atgtggggccgtggatgcagactgaaggtccggttctga
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