KEGG   Xiphophorus hellerii (green swordtail): 116723979
Entry
116723979         CDS       T07363                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03082  ATP-dependent chromatin remodeling
xhe03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116723979
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116723979
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xhe01009]
    116723979
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xhe03021]
    116723979
   03036 Chromosome and associated proteins [BR:xhe03036]
    116723979
Protein phosphatases and associated proteins [BR:xhe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116723979
Transcription machinery [BR:xhe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     116723979
    SWI/SNF complex
     116723979
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    116723979
   PBAF complex
    116723979
   SWI/SNF complex
    116723979
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 116723979
NCBI-ProteinID: XP_032425128
LinkDB
Position
8:512391..516805
AA seq 368 aa
MQLALSKTFGQKPVKFQLEEDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIMASSHATSVTLLKASECEEIFDGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPSSTSINRNRIGRDKKRTFPLCFDDHDPAVIHENAAQAEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAVASAIRQQIDSYPSDGLLEEQ
TDQRVIIKLNIHVGNISLVDQFEWDMSERDNSPEAFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRIRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcagctagctctgagtaaaacatttggccagaaaccagttaagttccagctggaggaa
gatggagacttttacatggtgggatcagaggtcgggaactacctgcggatgttcagaggt
tcgctctataagcgctacccgtcactatggaggcggctggcctccgtggaggagaggaag
aagatcatggcttcatctcacgccaccagcgtgacgctgctgaaggcctcagagtgcgag
gagatcttcgacgggaacgatgagaagtacaaggctgtgtccatcagcaccgagcctccg
gcgtacctcagggagcagaaggcgaagcgcagcagccagtgggttcccactttacccaac
agctcccatcacctggacgccgttccttcctccacttccatcaacagaaaccggatcggc
cgcgacaagaagagaaccttccccctctgcttcgatgaccacgacccggcggtgatccat
gagaacgcggcgcaggcggaggcgctggttccgatccgattggacatggagatcgacgga
cagaagctgagagatgccttcacctggaacatgaacgagaagctgatgacgccggagatg
ttcgccgagatcctgtgcgacgacctggacctgaacccgctggccttcgtccccgccgtg
gcgtccgccatccgccagcagatcgactcgtatcctagcgacgggctgctggaagagcag
accgaccagcgcgtcatcatcaagctgaacatccacgtggggaacatttctctggtggac
cagtttgagtgggacatgtcggagcgcgacaactcgccagaggccttcgccctcaagctg
tgctccgagctgggcctgggcggagagttcgtcaccaccatcgcctacagcatccggggg
cagctcagctggcaccagcgcacctacgccttcagtgagaacccgctccccacggtggag
atcgccatcaggaacaccggagacgccgaccagtggtgccccctgctggagactctgaca
gacgcagaaatggagaagaagatccgagaccaggacagaaacacaaggagaattagacgt
ctggccaacaccgccccctcctggtag

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