Xiphophorus hellerii (green swordtail): 116723999
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Entry
116723999 CDS
T07363
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116723999
03041 Spliceosome [BR:
xhe03041
]
116723999
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116723999
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116723999
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
116723999
NCBI-ProteinID:
XP_032425154
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Position
8:complement(24219344..24230061)
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AA seq
386 aa
AA seq
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MDDEQPKTLYVGNLSRDVTEALILELFSQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETASTKQLSFDEVLNQSSLSNCTVYCGGVTQGLTEQIMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTSIEGNIVKCYWGKETADIVQGPIQQVQMAQQNTLSFAAQ
PYNQWGQWYSNTQQISQYVPNGWQVPSYGVYGQAWDQQGYNHLHAGAGWTGLGAVSNGGM
VEPGQGVNGTMLTNQAGMSTTGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcagccgaaaaccctgtatgtggggaacctgtccagggacgtgacagag
gccctcatcttggaattgttcagccagattgggccttgtaaaagctgcaaaatgatagta
gatacagcaggtcacgatccatactgctttgtggagttctatgagcatagacacgccact
gctacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtgaaggtcaactgg
gccacgaccccaacgagccagaagaaagacacaagcagccacttccatgtttttgttgga
gaccttagtccagaaatcaccacagatgacataaaagcagcttttgctccttttggaaaa
atatcggactgtcgcgttgtgaaagacatggccacaggtaaatctaaaggctatggtttt
gtctccttcttcaacaaatgggatgcagagaacgccatccagcaaatggggggccagtgg
ctaggaggacggcagataaggaccaactgggccacgaggaagccggctcctaaaacgaca
aatgaaacagccagtaccaaacagctctctttcgatgaggtgttaaatcagtccagcctc
agtaactgcacagtctactgtggaggagtcacacaaggtctcacagagcaaataatgaga
cagaccttctcaccttttggccaaataatggagatccgtgttttcccagaaaaaggctac
tcctttgtgaggtttaactcccacgaggccgcagctcatgccatagtttctgtaaacggt
acctccatagagggcaacattgtaaagtgctactgggggaaagaaacagcagacattgta
cagggccccatacagcaggtacagatggcacagcagaacacactgagctttgcagcccaa
ccctacaaccagtggggccagtggtacagcaacacgcaacagatcagtcagtacgtgccc
aacggatggcaggtgccaagctacggcgtctacggacaggcctgggatcagcagggctac
aatcatttacatgctggagctggatggacgggcttgggcgccgtgagcaacgggggcatg
gtggagcctgggcagggagtcaacgggacaatgctaaccaaccaggcaggcatgagcacc
actggataccccacccactga
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