Xiphophorus hellerii (green swordtail): 116724147
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Entry
116724147 CDS
T07363
Symbol
tbc1d22b
Name
(RefSeq) TBC1 domain family member 22B isoform X1
KO
K20360
TBC1 domain family member 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116724147 (tbc1d22b)
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
116724147 (tbc1d22b)
Retrieval pathways
116724147 (tbc1d22b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
116724147
NCBI-ProteinID:
XP_032425462
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All DBs
Position
1:5606949..5625782
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AA seq
517 aa
AA seq
DB search
MATDNRINFWRRNTKVPGSVQPVYGAQHPPLDPRLRRTYPKDTKPKFNNVKSKKACSFHE
FACSTNDAWDIDDEEDENFCGTPFSASFTPSGQDFTSVHNQQLRHQTGETEHVLPHILTP
PRDEGHNSLRDDGSECERVNGKFVKSSSDADLNTTSVRSSLQKQQSLPVRPIIPLVARIS
DQNASGAPPMTVREKSRLDKFKQLLASPNTDLEELRKHSWSGIPREVRPITWRLLSGYLP
ANKERRELVLKRKREEYFGFIEQYYHSRTDEHYKDTYRQIHIDIPRTNPLIPLFQQPAVQ
EVFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEFVTEDVENFDVAALPLETQRNIE
ADSFWCMSKLLDGIQDNYTFAQPGIQNKVKALEELVSRIDVDIHNHFKKYEVEYLQFAFR
WMNNLLMRELPLRCTIRLWDTYQAEAEGFSHFHLYVCAAFLIEWRKEILCMADFQSLLML
LQNLPTIHWGNEEVGLLLAEAYRLKYMFADAPNHYKR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacaacaggatcaatttctggaggagaaacactaaggttcccggaagcgtg
cagccagtttatggagcacagcatccacctctcgatccccgtttgcgacgcacgtaccca
aaagacacaaagcccaaattcaacaacgttaagtctaaaaaagcttgcagcttccacgag
tttgcttgcagcacaaatgatgcttgggacattgacgatgaggaggatgaaaacttctgc
gggacacccttctcggcttcctttacgccttcaggccaggacttcacgtctgtgcacaac
cagcaactccggcatcagacgggtgaaaccgagcatgtgttgcctcacatactgactcca
cccagggacgagggtcacaactccctaagggatgatggctcagagtgcgagcgcgtcaac
ggcaaatttgtgaagtctagcagtgacgcagatctcaacacgacctcagtccgctcctcg
ctgcagaagcagcagtctctcccagtgcgtcccatcatccctctggtggctcgtatctcg
gatcagaatgcgtcaggggctccacccatgacggtgcgggagaaaagccggctggataaa
ttcaagcagctgctggccagtcccaacaccgacctagaagaactgcggaaacacagctgg
tcgggaataccaagagaagtccgaccaatcacgtggaggcttctctctggttacctgccg
gccaacaaggagcgcagagagctggtcctgaagagaaagagagaagagtattttgggttc
atagagcaatactatcactccagaacagatgagcactataaagacacatacagacagatc
cacattgacattccaagaaccaacccgctcatccctttgttccagcagcctgcagtccaa
gaggtgtttgagcggattctgtttatctgggccatccgtcatccagccagcggttacgtc
caagggatcaacgacctcgtcacacctttttttgtcgtcttcttgtccgagttcgtcacg
gaggatgtggagaactttgacgtggcggctctgcctctggagacccaaagaaacatcgag
gctgacagtttctggtgcatgagcaagctgctggatggcatacaggacaactacaccttc
gcccagcctggaatccagaacaaggtgaaggcgctggaggagctggtcagccggatagac
gtggatattcacaatcatttcaagaaatacgaggtggagtacctgcagtttgcgtttcga
tggatgaacaacctgctgatgagggagctgccacttcgttgtaccattcgtctgtgggac
acctaccaggctgaagctgaaggtttctcccacttccacctgtatgtgtgtgctgccttt
ctcatcgagtggcgcaaagaaatcctctgcatggctgactttcagagcctcctgatgctt
ctgcagaacctcccaaccatccactggggaaacgaggaagtgggtctcctcctggccgaa
gcctacagactcaagtacatgtttgcagacgcccccaaccattacaagagatag
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