Xiphophorus hellerii (green swordtail): 116724183
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Entry
116724183 CDS
T07363
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116724183 (pus1)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
116724183 (pus1)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116724183 (pus1)
Prokaryotic type
116724183 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
116724183
NCBI-ProteinID:
XP_032425538
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Position
8:complement(12567237..12569955)
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AA seq
417 aa
AA seq
DB search
MFRTRPLLSALVNYRQLLERNGLKFLCTMSEEARDQETAKLLKRPNEVNEDSAERATKRI
KAEGEHNEDDKRYPKKKVVLLLAYSGKGYYGMQRNPGNSQFRTIEDDLVTALVKSGCIPG
NHGDDMRKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIIEKINENLPPQIRVLGLKRVTQ
GFNSKNNCDARTYAYMLPTVAFSPKDYDTENIAPFRLETETLQKVNQLFALYKGTHNFHN
FTSQKAPSDPSARRYITEMSCGEPFVRNNYEFAVITVRGQSFMLHQIRKMIGLVIAVIKG
YAKEEVMERSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLEWDREEEAIKA
FKEAHIYPTIVETECEEGSMVSWMATLPIHDFEATVTGTQDNKDQKQENADEGNDSD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaacccgaccactgttaagtgccttagttaactacagacagttgttagagaga
aacggtttaaagttcttgtgcacaatgagtgaagaagccagagatcaagagacagccaag
ctgttaaaaaggccaaatgaggtgaatgaggactcagctgagagagccactaagagaata
aaagcagaaggggagcacaatgaagacgacaagaggtacccaaagaagaaagtggtcctt
cttttggcatactctggaaagggatactatggcatgcagagaaatcctggaaactcccag
tttagaaccattgaagatgatctggtcactgctctagttaaatctggttgcattcctgga
aaccatggtgatgacatgaggaagatgtccttccaaagatgtgccagaactgacaagggt
gtttctgctgctggtcaagtggtttcactgaagctccgtttaattgaggacataatagaa
aaaatcaatgagaatttaccaccacagatcagggtgcttgggctcaagcgagtgacccag
ggatttaattccaaaaataactgtgatgcccgtacatatgcctacatgctcccaactgta
gccttttctcctaaagactatgacactgagaacatagcgccgtttcgtctagaaacagag
actcttcagaaggtgaaccaactttttgccctctacaaaggcacccataacttccacaac
tttacttcccagaaggctccaagtgaccccagtgcccgccgctacatcacagagatgtcc
tgcggagagccttttgtccgcaacaactacgagtttgccgtgatcaccgtgcgtggccag
agctttatgctgcaccagattcgcaagatgatcggcctggtgattgcagtgatcaaaggc
tacgccaaggaggaggtgatggagcgaagctggggtcaggagaaggtggacgtcccaaaa
gctccgggactcgggctggtactcgagagggttcactttgatcggtacaacaagcgcttt
ggaggggacggtctgcatgagcggctagagtgggatcgcgaggaggaggcgatcaaggcc
ttcaaagaggctcacatatatcctaccattgttgagactgaatgtgaggagggttccatg
gtcagctggatggccactcttcccatccatgactttgaagcaacagttactggaacacaa
gacaataaggaccaaaaacaggagaatgcagatgaagggaacgactccgattag
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