Xiphophorus hellerii (green swordtail): 116724212
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Entry
116724212 CDS
T07363
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116724212 (nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116724212 (nup214)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116724212 (nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup214_FG
Beta-prop_NUP159_NUP214
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
116724212
NCBI-ProteinID:
XP_032425599
LinkDB
All DBs
Position
8:17940243..17968013
Genome browser
AA seq
1994 aa
AA seq
DB search
MGDDADSPPEREMKDFQFRQMKKVQVFEAVEDMPKDRSSLLTVSNKYGLTFVGLGRTFKV
YLTLNILAADKADGNSYEVVKGIPALVEVTGDMSLHHLALSCDELTLSVCGTSEETGLSI
AFYDVRTFINKARPQKSPFASLQPAVASDALVQDLKWNPAQPSILAACLSDGSMMILEVI
DSVKIQAQLPANSGVTCLSWSPKGKQVAVGKMNATVSQYTPALEEKRVIPCPPFYNSDDP
VKALDVLWLRTPVFAVAYAYADGCLETPPELVLISLPKKDEKVEPKYLNFGESVFGSCTE
RQHHYFLSHIEDWDLMLAASAASIEVSVIARQDDRMWEVWLLEDASRAELPVTETNDDTL
PLGLAIDYTSQQEIQITDEKTLPPAPTMLMLSTEGVLCPFALLNLNPGVKQLVSPFTALT
LEGERQPKPVSLAAQPAKTAASAGSAPAAFPNIALASVSSASSAPASSAPAASSLAVPFN
FVPTAPVSSSSSEFTFSVPTTHATTTLPPAFSLGGSGPFSSVSSSFSFASKPPSETPSAA
SAFSFSTPSMKPAAATPPPAPVSTPQSLPAASLPSVKLNLNDRFTSGETPAPAFSFNSTL
PKAAVSSSSTASTLSIPATKPPVVLTPVRPVQTGTPPSAVQKPAPTTQGRTQPPQATVSM
KTLEKQLQQKKESDPIMTGILEEIAHFQKELDDLKSRSMKADFKVGTNDGMKDLRKESED
LHIFTLEIKETTESLHGDIGTLKTTLIEGFAGAEEAKTQSELSKDKNYRQLLYKKSLDPR
SEEQLKEIRRLYQYVTSAVEDVNDVLDVEWEKHLEKKKKQKHMVVPGREGLFTTLSNNIY
IINQQKNRLDQLVQELTSLRLYSKNAAPSISQNIATGSTAAGFENELESLKDAFLKARLD
VTPPKVKARSSAVKISPIKQSQLRNFLSKGQMPPVRSTAPANLSRSAFLSPKYYEDLDDA
SSTSSLSQSLEPHPSHLDQEEEELQPLQPPAVTALSTPRHPTVVRTPSIQPGFGGIQSTP
LPKIHSAPSLGFGLSPIPSPVPTNKINLSGADSTALATKTVKHGAPPTERTVPMSAQQAA
ANAAMRRQMANQKPAPVSSSLTESTLKTVPQVVNVQELKEKGLPVQVSSIISSSVPDLTN
QAFANQVKRVSTTTPGIQKISNESTYGLQPGFVFGQSSKTDVSDVPTSSVEPNISKPFSF
TPGSAGFPFPSVSQGAGMTQAVKDVSKFSFGGNGKMAFGQTAEEPFSLTPKSMASGIGTG
TPTLPLSTSGEAAKHSSLSTAFRTEPQPPKTSGGETLGCFSGLRVGPGEEIKDTVTKPAA
AFTFGEPGLGSGKGVQSFSFASGFQKPAEDSGTTDLSKGASSSSLFKPPETNSKPTFSLP
PSSATPSTLPTSFSSLLAGSSEEPKAPPQLSEPTPPPEKEPSTTEPAGENASQSVAPEPA
VDSSSTATSTPALPALTTATIQDLPSANVAPAEVTPPAPSIVPFSTEATPDPSFTFSVST
SAAPTMAPVSQGAPPSFQVPISEKPGSIFTQPTPAPAATPVPAPAPVPAPATTDSSSIGA
TPVINTAAPAATTTTPTTVTPAPTTTANTVFGQQVVPPASSAPSATGFGSTGFSASPGAG
FNKSVFGQSGFGQPASSAGSSSGFSFTQSAFGPSSSSATTGGTSLFGASTAGGASSFSFG
SGSTNTASSTGSGMFGQSTTPAFGQSSGFGQPSGFGSNTTTSSSSGFSFGQPSGFGSSAA
NPVFGQQSATGSVFGQSSSGNSLFGSTSANAAGSSSGGFFSGLGGKPSEDAANKNPFGAT
GSTGGFGQPAQSGSNNLFGNSGAKAFGFGQTSSAFGDQKPSGTFSTGGGSVASQGFGSFS
SPTKPGGFGSPPVFGSPPSFGGSPAFGNTASFGTSPSFSNAMNPSAGKVFGEGTAAANMG
GFGFSSAPSAPSFGALASQTPPSFGTLAQQGSTFGSQPSSFSGFGQQPQTGGFPVNTFGS
PSQSSSQTFSSWRS
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgacgcagacagccctcccgagagggaaatgaaggattttcagtttcgacag
atgaagaaagtacaagtttttgaggctgttgaagatatgccaaaagacagatccagtcta
cttactgtttcaaacaaatatggcttgacatttgttggccttggccgaacattcaaagtg
tatcttactttaaatattcttgctgctgataaagctgatgggaactcctacgaagtagtc
aaaggtataccagctctggtggaagtgactggggacatgtctttgcaccacttggctctg
agttgtgatgaactcactttgtcagtttgtgggacatccgaggaaaccggtttgtccatc
gcattttatgatgtccgaaccttcataaacaaggccagaccacagaagtcaccatttgcg
tcattgcagccagctgtggcctctgatgctctggttcaggacctgaagtggaaccctgct
cagccttccatcttggctgcctgcttgtcggatggcagcatgatgattcttgaagttata
gacagtgtcaagattcaggctcagctacctgctaacagtggtgtcacctgccttagctgg
agtccaaaaggaaagcaggttgctgtgggaaaaatgaatgccaccgtcagccagtataca
ccagccctggaagagaagagagttatcccatgtccacctttctacaattctgatgaccca
gtcaaagctctggatgtgctgtggcttagaacacctgtgtttgcagtggcatatgcttat
gcagacgggtgtcttgagacccctccagagctggtgctgatctccctccctaaaaaggat
gagaaagtggagccaaagtatttgaacttcggtgagagtgtttttggcagctgtacagag
cgacagcatcactacttccttagtcacatagaagactgggatcttatgttagctgcgtca
gcggcgtcgattgaggtcagcgtgattgcaagacaagatgacaggatgtgggaggtttgg
ctcctagaagatgctagtagagcagaacttccagtgacggagacgaatgacgacaccctg
cctcttggcttagctatagactacacaagccagcaggagatccaaatcactgacgagaag
actttgcctccagctcccacaatgctaatgctgtccacagagggagtactctgcccattc
gctcttctcaacctgaatcctggggttaagcagctagtctcaccatttactgccctcacc
ttggaaggagagaggcagccaaagccagtttccttggcagcccaaccagccaaaaccgct
gcctcggctggatctgctccagcagcattcccaaacattgctcttgcatccgtctcttct
gcttcgtctgctcctgcttcgtctgctcctgctgcatcttccttggctgtcccgttcaat
tttgttcctacagctccagtgtcatcctcttcatcagaatttactttttcagttccaacc
actcatgccaccaccaccctccctcctgctttctcccttgggggatctggaccttttagc
tcagtatcctcgagcttctcttttgcttccaaacctccttctgaaactccctctgctgct
tcagcattttcgttcagcaccccttccatgaaaccagcagcagcaactcctcctccagct
ccagtgtcgacccctcagagccttcctgctgcctcccttccttctgtcaaattaaatcta
aatgacagatttacatcaggggagaccccagcaccagctttctcctttaattccacactt
cccaaggctgctgtttcctcttccagtacagctagcaccctttcaatcccagccacgaag
cctccagttgtattgaccccagtgcgtccagttcagacaggcacacctccctcagctgtc
cagaaaccggctcctactacacaagggcgtacccaacctccacaggcaacagttagcatg
aagactctggagaagcagctgcagcagaagaaagaatctgatcccattatgactggtatt
ttggaggagattgcacacttccagaaggagttagacgacctgaaatcgcgcagcatgaaa
gctgactttaaggttggtactaacgacgggatgaaggatctgagaaaagaatctgaagac
cttcacatcttcaccctggaaataaaggaaaccactgagtctctccatggggacattggg
acgctgaagaccactttaattgaaggctttgctggggcagaggaagccaaaacgcagagc
gagttgagcaaagacaaaaattacagacagctgctgtacaaaaagtctctagatccacgc
agtgaagaacagctcaaggaaattcgcagactttaccagtatgtcacatctgctgtggaa
gacgttaatgacgtcttagacgtggaatgggaaaaacacctggagaagaagaagaagcag
aaacacatggttgttcctggacgggagggtctgttcactacactgtccaacaacatctac
atcatcaaccagcaaaagaaccgactggaccagctggttcaggagctcacatcactgcgc
ctttacagtaaaaatgctgctccttccattagccagaacattgcaactggatctacagct
gctggttttgaaaatgaacttgagagtttaaaggatgcattcctgaaagccaggctggat
gttactccacctaaagtcaaagccagatcttcagcagtcaagatatcaccaattaaacag
tcccaacttcgcaatttcctctcaaagggacagatgcctcctgtacgctcaactgcacca
gccaacttgtctcgttcagcgttcctttccccaaaatactatgaggacctggatgatgca
agctcaacgtcctctctgtcccagtccttggagcctcacccgtctcacttggaccaggaa
gaggaagaactacaaccactacagcccccagctgtgacagcgttatccaccccccgccat
cccactgttgtaaggaccccgtctatccaaccaggctttggaggcattcagtccaccccg
ctaccaaagattcactcagcaccatctttgggttttggactgagccctattcccagtcct
gttccaaccaataaaatcaatctcagtggggctgacagcactgctcttgccacaaagacg
gtaaaacatggcgctccgccaacagagagaactgtccccatgtctgcccagcaggctgca
gccaatgcagccatgcgcagacaaatggccaatcagaaaccagctcctgttagcagttcc
ttgacagagtccaccttaaagaccgttcctcaggtggtcaatgttcaggagctcaaagaa
aaagggctgcctgttcaggtttcttccatcatcagctcttcggtgccggatctcacaaat
caggcttttgccaaccaagtcaagcgagtgagtactaccaccccagggattcagaagatt
tcaaatgaaagtacatacggtctacagccgggctttgtttttggtcagtcgtccaaaaca
gatgtttctgatgttcctactagttctgtggagccaaacatcagcaaaccattttccttt
acaccaggatcagcagggttccctttcccttctgtttcacaaggagctggaatgacacag
gcagttaaagatgtcagtaaattctcctttggtggaaatggcaagatggcatttggtcag
actgcagaagagccgttctctctaaccccaaagtctatggcctctggtattggcactgga
actcccacgctgcccttaagcacatcaggtgaagcagccaaacacagctccctctccaca
gccttcaggacggagccacaaccaccgaagacctctggaggagaaactcttggctgtttt
tctggactacgcgttgggccaggagaagaaatcaaggatactgtaacaaagccagctgct
gcatttacctttggggaacctggacttggcagtggcaagggagtacaatcattcagcttt
gcgtcaggtttccaaaagccagctgaagattctggaactacagatttgtctaaaggcgct
tcatcaagcagtttgttcaagcctcctgaaacaaactccaagccaactttctctcttccc
ccgtctagcgccacaccttcaaccttgcctacgtcttttagtagccttcttgcaggttct
tcagaggagccaaaagctcccccacagctctcagaacctacaccaccccctgaaaaagaa
ccaagcaccactgaaccagctggggaaaacgccagtcagtctgtggccccagaacctgca
gtggattcctcatctactgcaacatctacacctgcacttcctgcgctgacaactgccact
atccaagaccttccttctgccaatgttgcaccagctgaagtaactcctccagcaccatcc
attgtgcctttctcaacagaagccaccccagacccctcgttcactttttctgtttccact
tcggctgcccccaccatggcgcccgtctcccagggagccccgccatcattccaggttccc
atttccgaaaaaccaggttccatttttacacagcctactcctgcgccagctgctactcct
gtccctgctcctgctcctgttccagctcctgcgacgacagacagcagctctattggggcc
acaccagttatcaacacagctgctcctgcagccacaactactacccctacaaccgttacc
cctgcaccaaccaccactgccaacactgtttttgggcaacaagttgtacctccggcttcc
tctgccccctcagcaacaggatttggctcgactgggtttagtgcttcacctggggcaggt
tttaacaaatccgtgtttgggcagagtggcttcggccaacctgctagcagcgccggatca
tctagcggtttttcttttacccagtcggcatttggaccaagctctagcagtgcaacaact
gggggaacgagtctttttggggcttcaactgctggcggtgcaagttcgttctccttcggc
agtggaagcaccaacacggccagcagcaccgggtcagggatgttcggacaaagcacaact
cctgcgtttggtcagagctctgggtttgggcagccatcaggctttggcagtaacaccacc
acatcctcatcttcaggattcagttttggtcaaccctcaggatttggttcgtctgctgcc
aaccccgtatttggccaacagtctgcaactggaagtgtatttggacaatcgtcatcaggg
aacagtttgtttggttcaacttcagccaatgcagcaggttcatcttctggaggattcttc
agcggcctcgggggcaaaccgagtgaggatgccgccaacaagaacccattcggcgccact
ggttcaactggagggtttgggcagcccgctcagtctggctccaacaatctctttgggaat
agtggtgcaaaggcctttgggttcggccagacctcctctgcctttggagaccagaaaccc
agtgggactttcagcactggtggagggagtgtcgcttcacaggggtttggctctttttcg
tcaccaacaaaacctgggggctttggcagtcctccagtgtttgggagtcccccgtctttt
ggtggttccccagcatttggtaatacagcatcatttggcacaagcccctccttcagcaat
gcaatgaatccctcagctggtaaagtgtttggagagggaacggctgctgcaaacatggga
ggatttgggttctcttcagctcccagtgccccttcgtttggtgctctggccagtcagact
cctccttcgttcgggaccttggcccagcagggctccacatttggaagtcagcccagcagc
ttctcaggctttggacagcagccacagactggaggattcccagtaaacacgtttgggtct
ccaagccagtcaagttcccaaactttttctagctggcgaagctag
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