Xiphophorus hellerii (green swordtail): 116724227
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Entry
116724227 CDS
T07363
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116724227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116724227
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
116724227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
HEAT
Cnd3
Motif
Other DBs
NCBI-GeneID:
116724227
NCBI-ProteinID:
XP_032425619
LinkDB
All DBs
Position
8:complement(15793971..15823284)
Genome browser
AA seq
2836 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISDEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPILLQTLLTRNPRIFRDKSVLQQPLIQQ
YKISQNQVHGSPASNYQQSPSGCFTSPQCGSATQFVPQQNSPIPSPYTPQSPADYIQYNP
PSYSHQTQQVVSGARTILDNKISEHLSSNSSNRNSKPSLDEDYVSVAQRLGNEENYSSIK
AGIFSLSEERTKKPRPPLIMQSPPLEAGTAPDLLLTTADRKKKQRERNKEENENMDKNVF
YDIVSSPSKDSARLTLKLSRVKIPDTGRSEELLPTSPMDSDHNAVVLNNDIQSSGSPQDF
SHKSVVEEHQQDAAQPITKETGVISGIVFDDSEIDAFAEIERIDSANERERCSKEVQDKD
KPLKKRKQDTYPQEPGVETNEGPSLHGGSNISRLTPKKSSAASNGASRPALMVSIDLKQA
GRVIGQPVVVLEQQPCDDHIRRLKTSADTENRPGIIKKLPDTCQMHISDGHTESNKRKQN
NQRESKRNHDSKLDCDKGHSEDRHVEMTRLKQDRHSDFRHKEEKNNSSHRSQVSRPETLK
STSKVDRNSKHEEQKGKNKDKNKERDRQRDKDGDKEKLRDKEISRERDKDKVRDRERNRE
RDKSIDVAREEDKYQDKVKSKLRDGDKFRDGEEPIEREKFREEDKSRERAKDEDKDLEKL
KQKLRDRDKDGEKVRERDKSIELDIDEDQDMERVKDKVRDKDKIRDKEKKRERDKFRERD
KDQERVKDNHRENVRGRDKSIDVVKDGDEDVDRIKDKVKDKNRDREKTGGKEKSREIDKD
REKDRDKNRNRDKDENFEVGKEQNKDGKRDRERDKGKDRDRNRDRDRERDREKNKKHKTL
LEGDGNRISFEEQTKAENSKLKQDEGRKSAELNDRQRTSSSSLQTTPNKDQRASGDSSMN
QAANKRQASEMKMSEFPPFLLGGNSGSLKNFVIPKLKRDGKEGTDKDLRLKGKLIDGWTE
PLVRLERVSLVKNLNKKTKPVIVVKRLSIEDVKRIIKETKNAHSSRSRHWASFDKSDRER
ADKRKHSMINKGSKYAEVDSDDSDEKDNGDEELESELEDESPRKRKKKDHDKSWKFEEKK
GSRDHRRSGGFQNSRRGSSGRHRDWSCNDDSDGDSPPPSLNDVARKIKKQKSKMAYDSKM
TTEEKMDSSAFKRFANSVDNILESLEDVDLTAEEDDEIPQELLLGKQQLNELGSDSTKIK
AMGVFNKFSSSKLVKILNMLEKNIQDSVTLSTLMSQDNDSMDEERLWRDLIMERVIKSAD
ACLTALNIMTSPHMPKAVYIEDVIERVLQFTKFHLQNTLYPQYDRSYRADRHGGASHTSK
SKRPKSSAHKQKVVVGLYNKVCDIISIISELLEIQLLTDTTILQVSNLGITPFFVENVNE
LQLCAISVVTAVFSRYEKHRQLILEEIFASLARLPTSKRGLRNFRLNTSDSGGPPLYIQM
VSALVLQLIQCVVNLPNERETEEEPKKKVDKDILITNSYEIAMRTAQNFLSVFLKKCGSK
QGEDDYRPLFENFVHDLLSAVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDY
LGTVASNLRKDSLSCKMDQRTIDRILKETPGSDEVQQLQKALLNFLDENIDADPALLFAR
KFYIAQWYRDTTVEVEKAMKSQNDDDDPKYRRHSMDSDATGEIVQTVEARKKFLRKIIKT
TPSNFSSVKISSDTVDYEDSCLIVRYLASMRPFAQSFDIYLSQILRVLGESAIAVRTKAM
KCLSEVVAVDPSILGRVDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPELIEQYYDML
IERILDTGISVRKRVIKILRDICLELPDFHKITEMCVRMIRRVNDEEGIKKLVNETFQKL
WFSPTPSHDEEAMNRKILNITDVVLACKDSGYDWFEQLLQNLLKSEEDASYKPTKKACVQ
LVDNLVEHILKYEESIADCEEKGINSGRVVACITTLFLVTKIRPNLMVKHAMAMQPYLNT
KCNTQNDFMVICNVSKILELVVPLIENPSESFLNTIEGDLMKLIIKHGMTVVQHCVSCLG
AIVNKVTHNYKFVWACFNRFYGALAKLKTQHQEDPSGSTLAANKPTLLRSLFTVGALCRH
FDFDQEEFKGANKIIIKDKVLELLLYFTTHEDEEVQIKAIIGLGFQFIMHPELMFAQDVK
VLYISLLSEENRAVNLKIHVLKNLQTYLQEEDSRMQEADREWNKQAKQEDLKEMGDISSG
MSSSIMQIYLKQVLESFFHSQSTVRHFALNVITLTLSQGLIHPVQCVPYLVAMGTDPEPT
MKNKADQQLVEIDKKYSGFIHMKAVAGLKMSYQVQQAINGGKRAAVRGFRHDDSDSALCS
HLYSMVRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFIADNLACFPYQTQEEPLFIMHHI
DITLSVSGSNLLQSFKECLRKEPVRHEKKVKTKKRKKKHSHKRKNNSDEDEEKSSSTSSS
SSSSSSSSSSSDEEEEEVRKRKKPGGGDSDSDLGDEEAVMDRLPENTTPLQEFASASQGI
LLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKSKVHFNPRQTLEYLRSDVAN
RNLSYETKRNIVKQFLDFKVLMEHLDRDEEDEDGGEANANARNKAINSLLKGPKPQNHNH
SNHTAPVETDDESEDEDPPARKPRKDMDSADDTGQTVELMDIVAICRPKYKDRPQIAKIV
QKTRSGYSVHWMTGSYSGPWTVAKKRDGRKKVPWVDSIKESDIIYKKISLTSGQKLTNKV
AQTLRALYAAKDGSKS
NT seq
8511 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctaacc
gacttactgaaccagctgcctttgccttcccctcttccggccaccactgctaagagcctg
ctctacaatggaaggatctccgacgaggtcagcagcctgttggtgtgccgagacgagaat
ctggtgactcagctggcccatagccttaaccaggtctccacagaacacatagagctgaag
gacaacctgggaaatgatgaacctgagggtgatatgccaatacttcttcaaacgttgctg
accaggaaccccaggatcttcagggacaaaagtgtactgcagcaaccattaatacagcag
tacaagatttctcagaaccaagttcatggaagtccagcatcaaattatcagcaaagcccc
tctggatgctttacatccccacagtgtggctcagctactcagtttgtaccccagcagaac
agccccatacccagcccctacaccccccagagtcctgcagactacattcagtacaatcca
cccagttactctcatcagactcaacaagttgttagtggtgcgagaacaattcttgacaac
aaaatctctgagcatctgtcgagtaattcgtctaaccgtaactccaaacccagtttggat
gaagactacgtaagcgtggctcaaagactgggaaatgaggaaaattactcatccataaaa
gctggcatattttctctatctgaagagagaacaaaaaagcccaggcctcctcttatcatg
cagtcacctccacttgaggcaggcacagcccctgacctgctccttaccactgccgaccgt
aaaaagaagcagagagaaaggaacaaagaagaaaatgagaacatggacaaaaacgtcttt
tatgacatagttagctctccatctaaggactctgccagattgaccttaaaactgtcccga
gtgaagatcccagacacgggccgctctgaagaactccttccaacctcacctatggactca
gatcacaacgcggttgttttaaacaatgatattcagtcgtcaggttcccctcaagatttt
tcgcacaagtcagtggttgaagagcatcaacaagatgctgcgcagccaatcacaaaggag
actggggtcatcagtgggattgtgtttgatgactctgagatagacgcatttgctgaaatt
gaaaggatagactcagccaacgagagagagcgatgctctaaagaggtccaagataaagac
aagccactaaaaaaacggaaacaagacacgtaccctcaggaacccggagttgagacaaat
gaaggcccatctttacatgggggcagcaacatcagcagactgacacccaagaagtcgagt
gctgcgagtaatggtgccagtcgacctgccttgatggtcagtattgatctgaagcaagct
ggaagagtaataggacagcctgtagttgtcttggaacagcaaccgtgtgatgatcacata
cgtcgccttaagacaagtgcagatactgaaaacagacctgggatcatcaaaaagcttccc
gatacctgccagatgcatatttctgatggacatacagaaagcaataaacgaaagcagaac
aaccagcgtgaatcaaagcgcaatcatgacagcaaacttgattgtgacaaggggcattca
gaggacagacacgtggaaatgacgaggctgaagcaggacaggcattcagactttcgacac
aaagaggaaaagaacaacagtagtcacagatcccaagtcagcagacctgaaacgctcaaa
tccacaagcaaagtggatcgcaactcaaaacatgaagaacagaaaggcaagaataaagac
aagaataaagaaagggacagacagagagacaaagatggagacaaagaaaaactcagagat
aaagaaatatccagagaacgagacaaagacaaagtcagagatagagaaagaaacagagaa
agagacaaatccatagatgtggccagagaagaagacaaataccaggacaaagtcaaaagc
aaacttagggatggagacaaatttagagatggagaagaaccaattgaaagagaaaaattc
agagaagaagacaaatctagagaaagagccaaagatgaggacaaagacctggagaaactc
aaacagaaacttagagacagagacaaagatggagaaaaagtcagagaaagagacaaatcc
atagagctggatatagatgaagaccaagatatggagagagttaaagacaaagttagagat
aaagacaaaatcagagacaaagaaaaaaaacgagaaagagacaaatttagagaacgagac
aaagaccaagagagagtcaaagacaatcatagagaaaatgtcaggggaagagacaaatcc
atagatgtggtcaaagatggagacgaagatgttgatagaataaaagacaaggttaaagac
aaaaacagagacagagaaaaaacaggaggaaaagaaaaatccagagaaatagacaaagat
cgggagaaagacagagacaagaatagaaatagagacaaagatgaaaactttgaagtgggc
aaagaacaaaacaaagatggcaagagagatagagaaagagacaaaggtaaagacagagac
agaaacagagatagagacagagagagagaccgagaaaagaacaagaagcacaagacgctt
cttgaaggagatggcaacagaatctcatttgaggagcaaactaaagccgagaactctaaa
ctgaagcaagatgaaggcagaaaatcagctgaacttaacgatcggcagagaacatcgtct
tccagccttcagacaaccccaaacaaggaccaacgggcaagtggggatagtagcatgaac
caagctgcaaacaaacggcaggcctctgagatgaaaatgagtgagttcccgccgttcctg
ctggggggcaattctggaagtctcaagaattttgtgattcctaaattgaaacgagatgga
aaagagggaacagataaagatctccgactcaaaggcaaactaatagatggttggactgaa
ccattggtgcggttagagagagtttcactggtgaagaacttgaacaaaaaaactaaacca
gttattgtggttaagagactaagcattgaagatgtaaagaggatcattaaagaaaccaag
aatgcacacagctccagatccagacactgggcctcttttgacaaatcagacagagagaga
gcagataagcgaaagcacagtatgatcaataagggatccaaatatgctgaagtagattcc
gatgactcagatgagaaagacaacggtgatgaagagttggagtctgagttagaggatgag
tctccaagaaaaaggaaaaagaaagaccacgacaagtcatggaagttcgaagagaagaaa
ggttctagggatcaccggcgaagtggaggctttcagaactctcgccgggggtcaagtggc
cgccatcgggattggagctgtaatgatgattcagatggagactcccctccaccgagcctg
aatgatgttgcccgaaaaataaagaaacagaaaagcaagatggcatacgattccaaaatg
acaacagaggaaaagatggactcttctgcatttaagaggtttgcaaacagtgtggacaac
attcttgagagccttgaggatgtagacctcactgccgaagaagatgatgagatacctcaa
gagctgttgcttggaaagcagcaattaaatgagcttggcagtgattctactaagattaaa
gcgatgggtgtctttaacaagttttcttctagtaaacttgtgaaaattctgaatatgttg
gagaagaacattcaggacagcgtcacactttccaccttaatgagtcaagataacgactcc
atggatgaggagcgtttgtggcgggatctcatcatggagagggtgatcaagtctgcagat
gcctgtttgactgcgctcaacataatgacgtccccacacatgccaaaggctgtttatata
gaggatgtgattgagagggtgttgcagttcaccaagttccacctgcagaacactttgtac
ccgcagtatgaccgttcttacagggcggatcgccatggaggtgcctcacacacttcaaag
tccaagagaccaaaatcgtctgcccacaaacagaaagtggtggtgggattgtacaacaag
gtttgcgacattatcagcatcatctcagagctccttgaaatccagctgctcactgacacc
acaattctccaggtgtcgaacctcggaattacgcctttttttgtggagaatgtcaatgaa
ctgcagctatgtgccatctctgtagtgacagcagttttctctcgctatgagaagcacagg
cagctcattctggaagagatttttgcctctcttgctagacttcccaccagtaaacgtggc
ctcaggaactttaggttaaacaccagtgattcaggtggacccccgttgtacatccagatg
gtctcggctctcgttcttcaactcattcagtgtgtggttaatcttccgaatgagagagaa
actgaggaggaaccgaaaaagaaggtggataaagatatcctcattaccaactcttatgaa
attgccatgagaacagcacagaactttctctctgtgtttctcaagaaatgtggcagcaaa
cagggagaagacgactacaggcctctgtttgagaacttcgttcatgacctgctgtcggct
gtcaacaagcccgagtggcctgctgctgaactgctgctcagtttattgggcagactgctg
gttcaccagttcagcaataagcagacagaaatggccctcagggtggcgtcgctcgactac
ctcggcactgtagcctcaaacctgcgtaaagactcgctctcttgcaagatggaccaaaga
actatcgatcgcattcttaaagagactcctggcagtgatgaggtacagcagctccaaaag
gctttgctgaacttcctggatgaaaacattgatgcagatccagctttattgtttgcaagg
aaattttacattgcccagtggtacagagacaccacagtagaggttgaaaaagctatgaag
tctcaaaatgacgacgacgatccaaagtatcggcgacattccatggatagtgacgcaacc
ggggagattgtacagacggttgaggcacggaaaaaattcctccgcaaaatcatcaagaca
acgccatcaaacttcagctccgtaaagataagctctgacacagtagactatgaggactcc
tgtctgattgtaagatatctggcctctatgaggccatttgcgcaaagctttgatatttat
ttatcacagattctgagggtcctgggagagagtgctattgcagtgagaactaaagccatg
aagtgtttgtcagaggtggtggctgtggatccaagcatactaggaagagtggacatgcag
cgtggggtgcattgtcgtcttatggacaactccactagtgtccgagaagcagccgtggag
cttcttggccgcttcgtactcagtcgccctgagctcatcgagcagtactatgacatgctt
attgagaggatactggacacaggaatcagtgtgagaaaaagagtcattaagattcttaga
gacatttgcttggagctcccagatttccacaagataacagagatgtgtgtcaggatgatc
cgcagagtcaatgatgaggaagggatcaagaaactggtaaatgagacattccagaaactc
tggttttcccccacacccagtcacgatgaagaagccatgaacagaaagatcctgaacatc
acagacgtggtgttggcgtgcaaagattcaggctacgattggtttgagcagcttttgcaa
aatctgctgaaatcagaggaggatgcttcatataaaccaactaagaaggcctgtgttcag
ctggtggacaatttagtggaacatatactaaagtacgaggaatctattgcagactgtgaa
gaaaaggggataaactcaggtcgtgttgtagcttgcatcaccactctctttctggtgact
aaaatcaggcctaacctaatggttaaacatgccatggctatgcagccctacttgaacact
aaatgcaatactcagaatgacttcatggtgatctgcaatgtgtccaagattctggagctc
gttgttcctctgattgagaatccaagtgagtctttcctcaacacgattgagggagacctg
atgaagctcattattaagcacggcatgacggttgtgcagcactgtgtgagctgtcttggt
gctattgtgaacaaggtcacacacaactacaagtttgtgtgggcttgtttcaatcgcttc
tatggagctctggctaaactcaagacgcagcaccaggaggaccccagcggctccactctg
gctgctaacaaaccaactctgctgcgctcactgttcaccgtgggggctctttgtcgacac
tttgattttgaccaagaagagttcaagggagctaacaagatcatcataaaagacaaggtt
ttggagcttctactgtatttcaccacccatgaggatgaagaggtgcagatcaaggccata
attggtctagggttccagttcatcatgcacccagagctcatgtttgcacaagatgtgaag
gttctttatatcagcttgctgtctgaggaaaacagggctgtcaatctgaagatccatgtg
ctcaaaaatcttcaaacgtacctgcaggaggaggactctcgaatgcaagaggccgaccgt
gaatggaacaagcaagcgaagcaggaagatcttaaggagatgggcgacatctcctcaggc
atgagcagctctattatgcagatttacctcaagcaggtgctggagtccttcttccactca
cagtccactgttcggcactttgctctgaacgtcatcacactgactctcagccagggcctc
atacaccctgtacagtgtgtcccctacttggttgcgatgggaacagatccagaaccaacc
atgaagaacaaggcagaccaacaactagtggagattgacaagaaatactcaggattcata
catatgaaggctgttgctgggttgaagatgtcttatcaagtgcagcaggccataaatgga
gggaaacgtgcagcggtccggggtttccgacacgatgactcggactcggccctttgttct
catctctactctatggtccgtgggaacagacaacacagacgagctttcctcatctccctg
ctcaacctgtttgatgacagctctaaaacggaggtaaacatgctgctgttcatagctgac
aacctggcatgcttcccttatcaaacccaggaggaacctcttttcatcatgcatcatata
gacattactctgtctgtctctggcagcaatctactccagtctttcaaagagtgtttacgg
aaagagcctgtaagacacgaaaagaaggtaaagacaaagaagagaaaaaagaagcattct
cataagaggaaaaacaactcagatgaggacgaagagaagagcagcagcacatccagcagc
agcagcagcagcagcagtagtagcagcagtagcgatgaagaggaggaggaagttcggaag
cgaaagaagcctggaggcggtgactctgactcagatctgggcgatgaagaagcagtgatg
gaccgcctgcctgaaaacaccacccctctgcaggagtttgccagtgcttcacaggggatc
ctgctattgctggtgctcaaacaacacctaaagaatctgtatggcttctcagacagcaaa
atccagaagtactcgccgacggagtctgccaaagtttatgacaaggcagtgaacaggaaa
tctaaggtgcatttcaaccctcgtcaaactctggaatacctgaggagtgatgtggccaac
agaaacctcagctatgaaactaagaggaatattgtcaaacagtttttggacttcaaggtg
ctgatggagcacttggatcgtgatgaagaggatgaggatgggggcgaagcaaatgctaat
gccagaaacaaagccatcaattcgctgctgaagggtccaaaaccccaaaatcacaaccac
agtaatcacactgctccagtagagacagatgatgagagtgaggatgaagatcctcctgcg
cggaaaccaagaaaagacatggactctgctgatgacacgggtcagacggtggagctaatg
gacatcgtcgccatctgccgccccaaatacaaagacagaccgcagattgccaagatcgtc
cagaagaccaggagcggctacagtgtacactggatgacgggatcttactctggaccgtgg
actgtggcgaagaaacgggacggtcgcaaaaaggtgccttgggtcgacagcatcaaggag
tcggacattatttacaagaaaatctccttgacgagcggacagaagctcacgaacaaagtg
gcacagacgttacgagcgctgtacgcggccaaggatgggtcaaagagttaa
DBGET
integrated database retrieval system
