Xiphophorus hellerii (green swordtail): 116724268
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Entry
116724268 CDS
T07363
Name
(RefSeq) zinc finger FYVE domain-containing protein 16-like
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
xhe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116724268
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116724268
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116724268
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116724268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
SARA
FYVE
DUF6480
Motif
Other DBs
NCBI-GeneID:
116724268
NCBI-ProteinID:
XP_032425725
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All DBs
Position
8:26324740..26353525
Genome browser
AA seq
1397 aa
AA seq
DB search
MDSFFKAAVCDLDKVLDDFELNSEELECKPVFLKPPVHPFSSLGPQDSASEVSSASTSLP
DLNSLHYGSARSCSDSPGSHLQGADGSEVRGQPLTGVDLLSSVDRRPAKSSAPPCPDRTL
KPVCDLVNDASSAILVRTNSHDAFRELDAAEQQMEEEKEALLVDFDTPVVAKVGSELNLN
SITEEQASAGTDELHQQSSGYSASLSLLDIIFPAAVEKSSEPIDESQSRTAESADEDEKE
SKEQPCFSSEQPVENSLNLHETNPTESNKQATLSNKEHSLDKMLDEGVAESTEGLMHESN
GEPVSLSCLPIAMSMCGALVKSNTSEDNLEAAAELCDEAAASEDAETESLLALELKDDAR
DSTRDDDPSDSEQIPERRPSPEGQHGSLESTVPAELPTSDRLESSPVDPDPPEFGFEYLP
ESDQAELLVTDEELDAFLQAHAEAEQGAGVSFCSSGGDCTEPKCLSEPGQGLEEQQIEKG
QQSCGQDGREDMEELASQESCRTTAATPVLQDSCRPCQEDSSGVSYSLTSNTSLSQHRSS
SDQQHSYGGARPKQPHSQTTRPPPAGEEGVELNASPTPEDEESPSPIEEHSRFRDSNSSN
AFQNHQDFSVGFDELSEPPPYPGEEPAAVARSTSWKKDSIEELGSRQPEWVPDAEAPNCM
KCKQRFTFTKRRHHCRACGKVYCAGCCNRKCKLKYLDKEARVCVLCFDTIHKAQALERMM
SPTGPSPNPNVPSEYCSTIPPLQQARAAGTLNSPPPTVMVPVSVLKHPNNDACPREQKRV
WFADGILPNGEVADTARLSVTSHRSSQEFSPDPETSGSAGLDPGGGAPSVPEAPIVEPVA
RAPVSGPWDYGLLSGIGSSVTRVPSLLPDSQDELPPLLITTGEDDGEDVLVEESPAPCQI
RHLLEEGGPRPLTFVLNTNLLVNVKLVTYGGRQCWCVGSNGLQALGQKELVFLLECLSGE
KTLPRDLFSLYLSVYQDAQKGKFVEELDNITFTSSFLDSKDHAGMLFFSPSCQSLDGLTL
PPQPFLFGLLIQKLEVPWAKVFPLRLLLRLGAEYDMYPTMLISVRFRDSVYRETGHTIMN
LLADLRNYQYSLPVVEGLRIHMEMGHSYIEIPKASFSEMQKVVNSSNEHVISIGASFSQE
ADSHLVCFQNEEGNYQTQANSKPGKTRTVTGASFVVFNGALKASSGFIAKSSIVEDGLMV
QIPPETMESLRSALREQTDFHIPCGKNDGGEVRENVTVRWVDWTSPVNSGKTSGVDGRPL
DGIPSVRMQQDAEFESDSRSIRCTEVIYQLKAPDCSLASLLSSCSMFQKEIAMATCSALA
PHLSVLTAGGINSLWLRISTQADMVEYQAGSGGRLLPQRYMNEMDSALIPVIHGGSASVP
QTAMDMELVFYITHTFQ
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcttcaaggcagctgtttgtgatctggacaaagttcttgatgacttcgag
ctcaattcagaggaacttgaatgcaagcctgttttcctgaagccccctgtccacccgttc
tcctcactgggccctcaggattccgcctcagaggtctctagtgcctcaacaagcctccca
gacctcaattctcttcactatggctctgcaagaagctgttccgacagccccggcagccac
ctccagggcgccgacggtagcgaggtcagaggtcagcccctgaccggcgtcgaccttctg
tcttccgtggaccgcaggcctgcgaaaagctcggcgcccccttgcccggacagaactctg
aaaccagtgtgcgacctcgtaaacgacgcaagctcggccatcttggtacggaccaacagc
cacgatgcattcagggagctggatgcggctgaacagcagatggaggaggagaaggaggcg
ctgcttgtggactttgacacccccgtggtcgcaaaggtggggtcagagctcaacttgaac
agcattacggaggagcaagcttctgcagggaccgatgagttgcatcagcagagcagcggt
tactctgcttcactcagtttgttggacattattttccccgcagcagtagagaaaagctca
gaacccatcgacgagtcacagtcgagaaccgcagagtctgctgatgaagacgagaaagag
agcaaagagcaaccttgcttctcctcagagcaaccggtggagaattccttgaacctccat
gaaacaaatcctacagaatccaataaacaagcaactttatcaaacaaagagcattcattg
gataagatgttggatgaaggtgtagctgagtctaccgaagggttgatgcatgaatcaaat
ggcgaaccagtcagcttatcatgcctgccgatagccatgtcaatgtgtggcgctctggtg
aagtcaaatacctcggaagacaatttggaggcagcggcagagctttgtgatgaggcggcg
gcgtctgaggacgcagagacggagtcactgttggctctggaactgaaggatgacgccaga
gactccactagggatgatgacccctctgattcagagcagattccagagcgcaggccatct
ccggagggccaacatggctccctagaatctaccgttcctgcagaactccctacctctgac
cgtttggagtccagtccggtcgatcccgatccccctgagttcggttttgagtatttacct
gagagcgaccaggctgagctgctggtcacggatgaagagttggacgctttccttcaggcg
catgccgaagcggagcagggtgcgggggtttctttctgcagcagtggcggagattgcacc
gaaccgaagtgtctctcagagccgggccaaggtctggaagaacagcagatcgagaaaggt
caacaaagctgcggtcaggatggacgggaagacatggaggaactggcctctcaagaaagt
tgcagaacaactgctgctacaccagtattacaagactcttgtagaccttgccaggaagac
tcctctggagtcagctattctttaaccagcaacacttccctgtcccagcacagaagtagc
tccgatcaacaacactcctatggaggtgcgagaccaaaacagccacacagccaaactacc
agacctccacctgccggagaagaaggggtggagcttaatgcctctccaacaccagaagac
gaggagagcccaagtcctatagaggagcactccagattcagggattccaactccagcaat
gcctttcagaaccatcaggacttctccgtggggtttgatgaactctcagagccgcctcct
taccctggggaggaaccagcggccgttgccagatcaacaagctggaagaaggacagcatt
gaggagctggggagcagacagccggagtgggtgccagacgctgaagcgcctaactgtatg
aagtgcaagcagaggttcactttcaccaagaggcggcatcactgtcgagcctgtgggaag
gtgtactgcgctgggtgctgcaacagaaagtgtaagctgaagtacctcgacaaggaggct
cgagtgtgcgtcctctgctttgataccatacacaaagcccaggccctggagcggatgatg
agtcccacgggcccgagcccgaaccccaacgtcccgtctgagtactgcagcaccattccc
cctctgcagcaggctcgcgcggccggaacgctgaactcccccccgcccaccgtcatggtc
cctgtctctgttctcaaacaccccaacaatgacgcttgtccacgtgagcagaagcgcgtt
tggttcgctgacggtatcttgcccaatggggaggtggcagacacggccaggctgtcggtg
acgagccacaggagctcccaggagttcagtccagacccggaaacctctggctcagctggg
ttggaccctggaggtggtgccccatccgtccctgaagcccctatagtcgagccggtggcg
cgagctccggtgtctggaccctgggattacgggttgctttctggaattggttcttcagtg
acaagggttcccagtctgctaccagacagtcaggatgagctgcctcctctgctcatcacc
accggagaagatgacggagaagatgttttggtggaggagagtccagctccctgtcagatc
cgacacctgttggaagaaggaggtccgcgtcctctgactttcgttctgaataccaacctc
cttgtaaacgtcaaactggttacctatggcggcaggcagtgctggtgcgtcggctctaat
ggactgcaggctctgggacagaaagagttggtgtttctgttggagtgtttgtcaggagaa
aaaacgcttccaagagacctcttctcactttatctcagcgtttaccaagatgcccagaaa
gggaagtttgtggaggaactggataacattacgttcacaagcagcttcctggacagcaaa
gatcatgcaggaatgctgttcttctcccccagctgtcagtctctggacggcctcacgctg
cctccacagccgttcctgttcggcctgctcatccagaagctggaggttccctgggccaaa
gtgttcccgctcagactgctgctacggcttggagccgaatatgacatgtatccaacgatg
ctcataagtgttcgttttcgggactctgtgtatcgagagacaggacacaccattatgaat
ttactggctgacctgaggaactaccagtacagcctgccagtggtggaaggcctgaggatc
cacatggagatgggacacagttacattgagatccccaaggctagctttagcgagatgcag
aaggtggtgaattcctccaatgagcacgtcatcagcatcggagcgagcttcagccaggag
gccgactctcacctggtgtgtttccagaacgaagagggaaactatcagactcaagccaac
agcaagccagggaagactcgcacagtgactggagccagctttgtggtgtttaatggagcg
ctgaaagcctcgtcgggttttattgccaagtccagcatcgtcgaagatgggttgatggtt
cagatcccaccggagaccatggagtctttgcgctccgccctgagggaacagacagacttc
cacatcccctgtgggaagaatgacggcggagaggtccgagagaacgtcacggtccgctgg
gtcgactggacttctcccgtcaactctggtaaaaccagtggggttgatgggaggcctctg
gatggcatccccagcgtcagaatgcaacaggatgcagagtttgagtccgacagtcgctcc
attagatgcactgaggtcatctaccagctgaaggctccagactgcagcctggcgtcattg
ctgtcgtcttgcagcatgtttcagaaggagatcgccatggcgacctgcagcgctctggct
cctcacctctcggttctgaccgcaggcggcatcaactcgctctggcttcgcatctccact
caggccgacatggtggagtaccaggcggggtccggaggccggctcctcccccagcgctac
atgaacgagatggacagcgctctgattcccgtcattcacggagggagtgccagcgtaccg
cagactgccatggacatggagttggtcttctacatcacacacactttccagtga
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