Xiphophorus hellerii (green swordtail): 116724383
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Entry
116724383 CDS
T07363
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116724383
Cilium and associated proteins [BR:
xhe03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
116724383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TTC28_C
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
Rapsyn_N
TPR_BSK1_C
TPR_NPHP3
TPR_11
PUB
TPR_14
TPR_6
TPR_19
TPR_9
Motif
Other DBs
NCBI-GeneID:
116724383
NCBI-ProteinID:
XP_032425926
LinkDB
All DBs
Position
8:25848553..25969909
Genome browser
AA seq
2551 aa
AA seq
DB search
MEKPRARKEKFSLFGSRSTGRATNPSSSSSRSSSPGIPSAKVGKRRDRISGSGGPAALSK
AEFLERVRRSNQACQQGEFALAVRLYTEALTADPQNCILYSNRSAAHLRLGQHLKALDDA
IKARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPL
RDTLELTYQQLQRMKLDKSPFVVVSVIGQELLTHGYHGASVVVLEAGLKIGTCSLKLRGS
VFSALSSAYWNLGDVEKSMAHMQQDLEVTKTLGDQSGECRAHGNLGSALFSKSSYREALA
HHRNQLVLAMKLKDREAASGALSSLGHVYTAIGDYPNALASHKQCVLLARQTRCQLSEAR
QLGDMGAVYTALGDFPNAVQCHEQHLDIAKSMENRREEARAYSNLGSTYHSQRDFDKAIS
YHTKVLELARELSDRSIEMRAYAGLGHAARCMQDLERARQYHQSQLEIAQELQDRAAQGR
ASSNLGIIHHMKGEYETALKLHKAHLSLAQELGDYAGQGRAYGNMGNAHHALGVYDQAVR
YHRQELQISLEVNDRQSQASTHGNLAVAYQALGAHDRALQHYRHHLTIARELRDTQTEAR
ALANLGNFHSWRGEYAQALPYYQQYLALSPGLQDLEGEGKVCHNLAYAHYCLGQYKDSVR
YYEQDLALAKDLQDKLAQAKAYCNLGLAHKALGEYSQAEECQRYLLSLAQALDNTQAVFR
AYGNLGDVFVCRGDPSGALKFYQQQLAVAQKAADQKTEADAYAALGSVHRLLRQLDAALS
FHSRELTLRKDLADPQGECRALGRLAAVHMALGDYTTTFQCYEAQLGLAQGLRDARLEAQ
VHGNMGITKMNMAMFEEAIGYFEQQLAMLQQLSGSEGMLDRGRAYGSLADCYDALGDYEE
AIQYYEKYLTVAQSLNHVQDQEKAYRGLGNAHRSMGSLQQALVCFEKRLVVAHELGGEGG
GKAQAYGELGTLHSQLGNYEQALSCLEHQLSIARSAGDKSLEAEASDALGGVYQLMADNE
TALQWHQRALSIAEQTGCVRSQGRAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLT
AKTLAYGSLGRTHHALQNYTQAVMYLQEGLRLAEQLSRREDEAKIRHRLGLSLWAGGNLE
EAQHQLYRASALFETIRHETQHNLDYKLSLFDLQTSSYQALQRVLVSLGRHNEALAIAER
GRTRAFADLLVERQRGSRQVSGADPYTPVTAEHILETVNGQKALILYYSLAGGFLYSWLI
SPGTGIVKFNEAYLGEAGPEASEFQDGGGSPHGGGPVSLDQYICNAREALGVDSHHSRVC
SGSETESEAGDLLEQQFEELNNDLAAAADPTGYLRMVSRNNRFNRSCRSMTSLYSATVSP
VKDGLSPVCRPSNVGKPPLRALYDLLIAPMEGGLMHSSGPVGRNRQLVVVLEGELYLIPF
ALLKGSSSNEYLYERFNIISVPSLASLQATSKPQPRPSGLLLCPDGGSVAAVVGAPHLPP
SVMDRWLWGPLPSAQDEALSLGEQLGCHPLTGANATKERVLAALSQAECVHFATHTSWKL
AAIVLSPNHERSTGDGPQENSLRGTAALADGADQEGKLERLFPRSHRSPERLRGPEERSE
DGESVCGVESVCDSAPLHDFLLTAADILDLCLSVKLVVLRSYPESSCRVTADGVVGLTRA
FLAAGVQCVCVSLWPVPVAASKLFMHTFYTALLNGSKASLALTEAMRNLQSSKHFSHPSN
WAGYLLIGSDVKLNSPMSLVGQALAEILQYPEKARDALRVLLHLVEKSLQRIQSGHCNPM
YTSQQSVENKVGGVPGWQALLSAVGFRLEVSVCGGGLPAAVFFPTSDPGDRLQQCSTTLQ
SLLGLTPPALQALCKLVTTSEAGEQLIHKAVKSMVVTLHQVLVQLQSGDKEQDFPLAPIQ
VSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQASRRNMHFALQALLALFDSTE
LPKRLSMDSSSSLESLSSSQSASQPQSLPLALSCYPPQPSFLPPGCSDNLSCDAISVYSL
SSLASSLSFLSRPEPAGSDIISHRSHPQEPEKQGGGKGLYYSSQRLARGRLANHGGASAG
GEDEEYEGFSIISSEPLGRAGRECDTLPLPAGHRQGRGGSGRGSAVGQTLIVSSKGSIST
PTSPLKAPPLALPDHPSSKVTQKISLPTRTVKGKASSSESDQSSTETDSTVKSQEERMGP
AGQLDPHELAQKILEETHSHMQAVETLQKANTRVTSLRGAGGREDPHTRQPSVSTPTTPT
FKPARGARGFQLSETSAFSRPPSRASLKAGSSPFTVHKHLSPHPSDSRPPPTPPKPPSRS
SSLQKINTSASSSPSSSLLAKERKSPVVSDELAQHKPKYSGSPYSCHISLSPSPADSATS
PALSYSSGGSVSAASSPTASSPTNPSELSQTKQDNKVQAMHNLKTFWAGVGQKQEVPGRL
ASLRGGSKKMSTVQKDVLGLLNLSPRHGSGRKHADRQEDHDRPNGHRKLEPKPPLAPSAG
LPTNHKGGIKLPSGNGYKFLSPGQFFPSSKC
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcccagagcgaggaaagagaagttctccctttttggctctcgctccaccggc
agagccaccaacccttcctcctcatcttctcgctcttcatctcccgggatcccctcggcc
aaagtcgggaaaaggcgggatcggatttccggctccggcggtccagccgccctgagcaaa
gccgagttcttggaacgtgtgcgccgcagtaaccaggcctgccagcagggggagtttgca
ctggctgttcgtctctacactgaggccctcacggcggacccgcaaaactgcatcctgtac
agcaaccggtctgcggcccacctcagactgggtcagcacctcaaggctctggacgacgca
atcaaagcccgtctaattaaccccaaatggcccaaggcctactttcgacaaggggttgcc
ctgcagtacctgggtcgtcatgccgacgcgctggcggcgttcgcgtcgggcctcgcgcag
gatcccaagagtctccagctgcttgtcggcatggtggaggcggcaatgaaatcaccactc
agagacactcttgagctcacctaccagcagcttcagaggatgaagctggacaagagcccg
ttcgtggtggtgtccgtcatcggccaggagctgctgacgcacggttaccacggcgcctcg
gtggtggtgctggaggcggggctgaagatcggcacgtgctcgctgaagctccgcggctcc
gtcttctccgctctcagctcggcgtactggaacctcggagacgtggagaaaagcatggct
cacatgcagcaggacctggaggtgaccaagactctaggagaccagtcgggtgaatgccgg
gctcacgggaacctcggctcggcgctgttctctaaaagcagctacagagaagcgctggcc
caccacaggaaccagctggtactggccatgaagctcaaggacagagaagcggcatcgggc
gccctcagcagcctgggccatgtgtacaccgccataggggactaccccaacgctctggcc
agccacaaacagtgtgtcctgctggcccgccagacccggtgccagctgtctgaggcgcgc
cagctgggcgacatgggtgccgtttacaccgcactgggagacttccccaacgccgtccag
tgtcacgagcaacacctggatatcgcgaagtctatggagaaccggagagaggaggcccgg
gcgtacagcaacctgggcagcacctaccactcgcagcgggactttgacaaggccatatct
taccataccaaggtgctggagttggcgcgggaactgtcggacagatcgattgagatgagg
gcgtacgccggtctgggtcacgctgctcgatgcatgcaggacctggagagggcccgtcag
taccaccaaagccagttagagattgctcaggagctgcaagacagggcggcacagggccgg
gcttcctctaacctgggcatcatacatcacatgaagggggagtatgaaacggcgctgaag
ctccacaaagcccacctgtcgttggcgcaggaactgggtgactacgcggggcagggcagg
gcctacgggaacatgggcaacgcccatcatgcgctgggcgtctacgaccaggcggtgcgg
taccacaggcaggagctgcagatctctctggaggtgaacgatcgccagtcgcaggcctcc
actcacggtaacctggcggtggcctatcaggcgctgggagctcatgaccgtgctctccag
cattaccgtcaccacctgaccatcgcacgggaactcagagacactcagacggaagcgaga
gccctagcaaacctggggaacttccacagctggaggggagagtacgctcaggctctgccc
tactaccagcagtacctggctctgtccccggggctgcaggacctggagggcgaagggaaa
gtctgccacaacctggcctatgctcactactgcctgggacagtacaaagactctgtcagg
tattatgagcaggacctggccctggctaaagacctgcaggacaaattagcacaagctaaa
gcctactgtaacctgggtttggcccacaaagctctcggagagtacagccaagcagaggag
tgtcagagatacctgctctctctggctcaggctctggataacacacaggcggttttcagg
gcctacgggaacctcggggacgtgtttgtgtgtcggggggatccgtccggagcgctcaag
ttctaccagcagcagctggctgtggctcagaaagctgccgaccagaagacggaagccgac
gcgtacgctgcactgggatcagttcacaggctgctccgccagctggatgctgcgctgtcc
ttccacagccgggagctgactctccgtaaggacctggccgacccccagggggagtgccgg
gccctgggccgcctggcggcggtccacatggcgctgggcgactacaccacgaccttccag
tgttatgaggcccagctggggctggcgcagggcctccgggacgctcgattagaggcccag
gtccatgggaacatgggcatcaccaagatgaacatggcgatgttcgaggaagccatcgga
tacttcgagcagcagctggccatgctgcagcagctgagcggcagcgagggcatgctggac
agaggcagggcctacgggagcctggccgactgctacgacgccctgggagactacgaggag
gccatccagtactacgagaagtacctgacggtggctcagagtctcaaccacgtccaggac
caagagaaggcctacagaggcctgggaaacgcacacaggtccatgggcagtctccagcag
gcgctggtgtgcttcgagaagcggttggtggtagcccacgagctgggcggcgagggcggg
gggaaggcgcaggcttacggggagctgggcaccctgcacagccagctggggaactatgag
caggccctgtcctgtctggagcaccagctcagcatcgctcgctcagcgggggataaatcc
ctggaggccgaggcgagcgacgccctgggaggcgtttatcagctgatggcagacaacgaa
actgctctgcagtggcaccagagggcgctgagcatcgccgagcagacgggctgcgtgagg
agccagggccgcgcctacggcaacctgggcctgacctacgaggctctggggaactacgag
cgggccgtggtgtttcaggagcagcacctcagcgtggcggcgcagaccaacgacctgacg
gccaaaactctggcctacggaagcctagggaggacacaccacgccctgcagaactacact
caggctgtgatgtacctgcaggaaggtctgcggctggctgagcagctgagccggagagaa
gacgaagccaagatccgccatcgcctcggtctttctctgtgggccggcggcaacctggag
gaggcacagcaccagctgtacagagcttctgcgttgttcgagacaatccgccatgagacg
caacacaacctggattacaagctgtccttgtttgatctgcaaaccagctcgtaccaggct
ctccagagagtcctcgtcagcctagggcggcacaacgaggctctggccatagccgagcgg
gggcgcactcgagcgtttgccgatttgctggtggaacgccagagaggaagcaggcaagtg
tccggcgccgacccttacaccccggtcaccgcggagcacatcctggagacggtcaacggt
cagaaggcgctgatcctctactattcgctggctggaggctttctctacagctggctcata
tctcccggcacaggcatcgtgaagttcaacgaggcgtacctgggagaggcggggcccgag
gcctctgagttccaggacggcggcgggagcccgcacggcggaggccccgtgtctctggat
cagtacatctgcaacgccagagaggctctgggagtggacagccatcacagcagggtgtgc
tccggcagtgagacggagagtgaagctggagatctgctggagcaacagtttgaggagctg
aacaacgatctggccgccgccgccgatccaaccggctacctccgcatggtgtccagaaac
aaccgcttcaacaggagctgtcggagcatgacgagcctttacagcgccaccgtgtctcca
gtgaaggacggcttatctcctgtttgccgaccgtctaacgttggcaaacctcctctacga
gccctctacgacttactcatcgctccaatggaagggggtctgatgcacagcagtggacct
gttggcaggaacaggcagcttgtggtagttctggagggagaattgtacctgatccccttt
gccttgctcaaaggcagctcctccaatgagtacctgtatgaaaggtttaacatcatttct
gtaccgtctctggccagcctgcaggctacaagcaagcctcagcctcgccccagcggtctc
ctgctgtgtccggatggaggctcggtggccgccgtggtcggggcccctcacctgcctccc
agcgtcatggaccgctggctgtgggggcctttaccctcggcccaagacgaggcattgtct
ttgggtgagcagctgggctgtcaccccctgaccggggcaaacgccaccaaggagcgcgtc
ttagcggcgctgagtcaggccgagtgcgttcactttgcgacccacacgtcctggaagctc
gccgccatcgtcctgtcccccaaccacgagcgcagcaccggggacgggccgcaggagaac
tctctgcgcgggacggcggcgttagcggacggcgcggaccaggaggggaagctcgagcgt
ttgtttcccaggagtcaccgcagcccagagagactccgaggaccggaagaaagaagcgag
gacggggagagtgtttgcggagtggagagcgtgtgcgacagcgcgccgctccacgacttc
ctcctcactgccgccgacatcctggacctgtgcctctcggtgaagctggtggttctgagg
tcgtacccggagtccagctgtagagtgacggccgacggagtggtgggtctgacccgggcc
ttcttggctgcgggcgtccagtgtgtgtgcgtgtctctgtggccggtgccggtcgctgct
tccaagctcttcatgcacacgttctacacggcgctgctaaacggcagcaaagccagcctg
gccctgacggaggccatgaggaacctgcagagcagcaagcacttctcacacccctccaac
tgggctggttacctgctgataggcagcgatgtgaagctgaacagccccatgtcgctggtg
ggacaggccctggcagagatcctgcagtacccagagaaagccagggacgccctcagggtg
ctgctgcacctggtagaaaagtcgttgcagcgcatccagagcggtcactgcaaccccatg
tacacgtcgcagcaaagcgtggagaacaaggtcggcggcgttcccgggtggcaggccctc
ctgtccgccgtgggcttccggctggaggtctccgtttgcggtggcggactcccggcggcc
gtgttcttcccgacctctgaccccggagatcgtctgcaacagtgcagcaccacgctgcag
tctctgctcggtctgactcctccggctctgcaggctctgtgtaagctggtcacaacatct
gaagcaggagaacagctcattcacaaggccgtgaaaagcatggtggtgacgcttcatcag
gtcctggtgcagctgcagtccggcgacaaagagcaagacttccccctggctcccatccag
gtgtcgatcagcgttcagctatggaggctgccgggctgccatgagttcctggctgctctg
ggttttgatctgtgcgaggtcggtcaggaggaagtcgtgttaaagacgggaaaacaggcc
agcagacgtaacatgcatttcgcccttcaggcccttcttgccctgtttgactccacggag
cttcccaagcgactgagcatggacagttcgtcgtctttagagtctctgtcgtcctcccag
tcggcctcccagcctcagtctttgcccctcgctctcagctgttaccctcctcagccctcc
ttcttaccccccggttgctccgacaacctctcctgcgatgccatctccgtctacagcctc
agctccctcgcctcctccctcagcttcctgtctcggcccgagccggcgggaagtgacatc
atcagccatcgctcgcatccacaggagccagagaagcagggtggaggaaagggcctgtac
tactcctcgcaacgcctggcaagaggccggctggccaatcacggaggagcgtcggcagga
ggagaggacgaggagtacgagggcttctccattataagcagcgagccgctggggcgggcg
gggagggagtgcgacacgctgcctctccctgcgggacaccgacagggcagaggtggttcc
ggcagagggtctgcggtgggccagactttgatagtttcctccaaggggagcatcagcacg
cctacgtccccgctcaaagctccaccactggcgctgccggaccatccaagctccaaggtc
acccaaaaaatctcattgcctacacgaacagttaaagggaaggctagcagctccgagtcg
gaccagtcgagcaccgaaacggacagcaccgtcaaatcccaagaagagaggatgggcccc
gccggacagctggatcctcacgaattggcccagaagatcctggaggagacccacagccac
atgcaagctgtggagacgctgcagaaagcaaacaccagagtgacatctctgagaggagcc
gggggccgagaagaccctcacaccaggcaaccgtctgtgtctacccccactaccccgacc
tttaaacccgccagaggggcgcgtgggttccagctgtccgagacaagtgcgttcagcaga
cctcccagcagggctagtctgaaggccgggtcgtccccttttaccgtccataagcacctt
tcaccccatccctctgattccaggcctcccccaactcctcccaaaccgccgtcccgctcg
tcatcgctgcagaaaatcaacacatccgcctcttcttctccttcttcatctctcctcgct
aaggagaggaaatcccccgtcgtctcagacgagctggctcaacacaaacccaaatactcc
ggctcgccttacagctgccacatatcactgtctccctctccggccgacagcgccacgtct
ccagccctttcctactcctccggaggctccgtctcggcggcgtccagcccgacggcgtcc
agcccgacgaacccttcggagctcagccagacaaagcaggacaacaaggtccaggcgatg
cacaacttgaagaccttctgggccggcgtcggccagaaacaggaggtgcccggccgtttg
gcgtcgctccgaggcgggagcaaaaaaatgagtacggttcagaaagacgttttgggtttg
ctgaacctctcacccagacacgggtctggcaggaaacacgcggacagacaggaagaccac
gacagacccaatgggcaccgcaagctggagcccaaacctccacttgctccatcagctggt
cttccaacaaaccacaaaggaggcatcaaacttccctctgggaacggatacaagtttctc
tcgcctggacagttttttccatcttctaaatgttaa
DBGET
integrated database retrieval system
