Xiphophorus hellerii (green swordtail): 116724395
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Entry
116724395 CDS
T07363
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03272
Virion - Hepatitis viruses
xhe04514
Cell adhesion molecules
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116724395
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116724395
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116724395
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116724395
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116724395
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Swi5
WLS-like_TM
Snapin_Pallidin
SUR7
Motif
Other DBs
NCBI-GeneID:
116724395
NCBI-ProteinID:
XP_032425952
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Position
8:complement(26076806..26087442)
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AA seq
502 aa
AA seq
DB search
MSSKPNGSPPPYEEDDRYNGPVQPAYSYFPDDEFQHFYRWSSPPGILKIMAIIVLVLCVA
IFACVASTLAYDSQGAMSGFGGMYGGSYGGGYGGTYGGGYGGSSYYGAGNGYGYGSIAGN
YNDPRSGKGFMIVMAAFAFIFSLVIFIVIVSHQSMCQSRKFYLAVLIISAILALLMLIAT
VVYLVAVNPSSQASTAYGSQIAALCAPYQQQQMSGVLQNQYLYHYCVVEPQEAIAVVFGF
MVTAALIIMLVFALKTRQKINNYGKQNILWKKVKVVDDLAPPEDVEAWVNNVSAAPEDVP
AADYPEYSDYSEKRRGSRSHLDDDESNYDKPPISYTPQPVVDRPLQNGAPYSSSSSEVAS
STGRPKKRRAGRPRRVDGQDYDTDYNSSGDELDDNDFDSEFPPIANEQERNRYKQEFDRD
HLEYKDLQAELDVLNKDLSNLDKELDELEEGSPQFLDTLDEYNKLKRIKKSADYQVKKRR
CKYLKHKLNHIKKMVSDYDRRT
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaaacccaatgggagcccccctccctatgaagaggatgatagatataatgga
cctgttcagccagcctactcttacttccctgacgatgagttccagcacttctaccgctgg
tcttcgcctccaggaatccttaaaatcatggccatcattgtccttgtgctgtgtgtggcc
atctttgcctgcgttgcctcaacgctggcgtatgacagtcagggagccatgtccggcttt
gggggaatgtacggaggaagttatggaggaggttatggaggaacttatggaggaggttac
ggaggatcgagctactatggagctgggaacggttatggctacggttcaattgcgggaaac
tacaatgacccgcggtccgggaaagggtttatgatcgtaatggccgcctttgccttcatc
ttctccctggtcatctttatcgtcatcgtgtctcatcagagcatgtgtcagagcaggaag
ttctacctggccgtgttgatcatcagcgccatcctggcactgttgatgctcattgccact
gtagtgtacttggtggcagtaaacccctcatcccaggcctcgacagcttacggcagccag
attgcagctctgtgtgctccatatcaacagcaacagatgtcaggagtgcttcagaaccag
tacctttaccactactgcgtggtggaaccacaagaggccatcgccgttgtgttcggcttc
atggtgaccgcagctttgatcatcatgctcgtcttcgccctcaagacgcggcagaagatc
aacaactatggaaaacagaacatcttgtggaagaaagtcaaagttgtggatgatcttgca
cctcctgaggacgtcgaggcgtgggtgaacaacgtgtctgctgctcctgaagacgtccca
gctgcagactacccagagtactccgactactccgagaagcggagaggctccaggagtcac
ctggatgatgatgagagcaactacgacaaaccccccatcagctacaccccgcaacctgtg
gttgacaggcccttgcagaacggggccccttacagcagcagcagctcggaggtcgcaagc
tcaacggggcggcccaaaaagaggcgcgcaggacggccgcgccgcgttgacgggcaggac
tacgacacggactataactcgtctggggacgagctggacgacaacgacttcgacagcgag
ttcccgcccatagcaaacgagcaggagcgcaaccgctacaagcaggagtttgaccgcgac
cacctggagtacaaagacctgcaggcggagctggacgtcctcaacaaggacctgtccaat
ctggacaaagagctggacgagctggaggagggaagcccacagttcctggacactctggat
gagtacaacaagctgaagagaatcaagaagtctgcagattaccaggtgaagaagcgcagg
tgtaaatatctgaagcacaaactgaaccacatcaagaagatggtcagtgattatgaccgc
aggacctga
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