Xiphophorus hellerii (green swordtail): 116724445
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Entry
116724445 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724445
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724445
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
LRR_8
Motif
Other DBs
NCBI-GeneID:
116724445
NCBI-ProteinID:
XP_032426054
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Position
8:complement(2771796..2788259)
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AA seq
1133 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPEPSCVSFKSNDSKEFLIDF
KSPGSPPSERGDQQSSEVPSGPSVQQHQTQLDSILMLLEDNIITFVKNELKKIQKLLNPD
YPECSESQKEDNEVLEGGDEEQRRSNREAFMKITLNFLRRMKNVELADHLQNKRLAEVCQ
HQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKP
HRPETTIRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIF
PFTFRELNLLKEKKFSLVELVHYFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEI
LTDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVGMVTEVRGFNDPQKE
EYFRKRFRDEKQANRIISHMKTSRSLHIICHIPVFCWITATVLEVVLETREGGELPSTLT
EMYIHFLVVQEKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFGQLQKGNLIFYESDLT
ECGIDIRTASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFTNSGVNLM
KENTPSFFSTFFSRSNINNLHQRAVDQALQSPNGHLDLFLRFLLGLSLHSNQRLLQGLLT
QTGSRSQTNQDTVKYIKEKISKNVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTD
KLSPAQWSALVFILLSSGKELDVFDLKKYSASEEVLLRLLPVVKTSNKALLSDCNLSERS
CEALSSVLSSQSSSLRELDLSNNNLQDSGVKFLSAGLKSPNCNLETLRLSDCNLSERSCE
ALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASL
ASALTSNSSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGLPFLTPGLRKY
SCQLTIDTNTVSRKLKLSKDNRKVTWEELQSYPDHPDRFDLPQLLCRTGLTGRCYWEVEW
RGEVDISVSYRRIKRKGDNRDCLFGGNDHSWSLRCSDFVGYCVWHNNRKACLSSSSVSNR
VAVYVDCPAGILSFYRISSDSLILLHTFNTTFTEPLIPGITVWSSYGSSLFLC
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaacccagctgcgtgtcctttaagagcaacgattccaaagagtttctcattgacttt
aaatctcctggatctccaccatcagagagaggggaccagcagagctcagaggttcctagt
ggcccatctgtccagcagcatcaaacacagctggactccatattgatgctgttggaggac
aacattatcacttttgtgaagaacgagttgaagaaaatccagaaattactgaatccagat
tacccagaatgctcagagagtcagaaagaggataatgaggtgttggaaggtggtgatgaa
gagcagaggaggagcaacagagaggcattcatgaagatcacactgaacttcttgaggagg
atgaagaacgtggagctggctgaccatctgcagaacaaacgtcttgctgaagtttgtcaa
catcaacttaaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaa
gcaggaagtccaacccttctgaaccagatctacacagagctctacatcacagagggaggg
actggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaacca
cacagaccagaaacaacaatcagacaagaagacatctttaaagtcccacctggaagagat
caaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaaca
cagaagttcactctggactgggctgaagacaaagcccaccagaacatccagtttatattt
ccatttactttcagagagctgaatctgctgaaagagaaaaagttcagcttggtggaactt
gttcattatttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctt
ttcatctttgatggcctggatgagagtcgacttcctctggacttccacaacaaggagatc
ctgactgatgctacagagtccacctcagtggacgttctgctgacaaacctcatcaggggg
aaactgcttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatc
cctcctcagtgtgttggcatggtgacagaggtcagaggattcaatgaccctcagaaggag
gaatacttcaggaagagattcagagatgagaaacaggccaacaggatcatctcccacatg
aagacatcacgaagcctccacatcatctgccacatcccagtcttctgctggatcactgct
acagttctggaggttgtgttggagaccagagagggaggagagctgcccagcaccctgact
gagatgtacatccacttcctggtggtccaggaaaaagtgaagaaggtcaagtatgatgga
ggagctgaaacagatccacactggagtccagagagcaggaagatgattgagtctctggga
aaactggcttttggtcagctgcagaaaggaaacctgatcttctatgaatcagacctgaca
gagtgtggtatcgatatcagaacagcatcagtgtactcaggagtgttcacacagatcttt
aaagaggagagaggtctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcag
gagtttctggctgctcttcatgttcatctgactttcaccaattctggtgtcaacctgatg
aaagaaaatacaccatcatttttctctacattttttagcagatcaaatataaataatctc
catcagagagctgttgaccaggccttacagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggactttcactgcactccaatcagagactcctacaaggtctgctgaca
cagacaggaagtagatcacagacaaatcaggatacagttaagtacatcaaggagaagatc
agtaagaatgtgtctgcagagaaaagcatcaatctgttccattgtctgaatgaactgaat
gatcgttctctagtggaggagatccaacagtctctgagttcaggaagtctctccacagat
aaactgtctcctgctcagtggtcagctctggttttcatcttactgtcatcaggaaaagaa
ctggatgtgtttgacttgaagaaatactctgcttcagaggaggttcttctgaggctgctg
ccagtggttaaaacctccaacaaagctctactgagtgactgtaacctctcagagagaagc
tgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctg
agtaacaacaacctgcaggattcaggagtgaagtttctatctgctggactgaagagtcca
aactgcaacctggaaactttgagactgagtgactgtaacctctcagagagaagctgtgaa
gctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaac
aacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgc
aacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctg
gcctcagctctgacctccaactcctcccatctgaaagagttggacctgagctacaatcat
ccaggagactcaggagtgaagctgctgtcggctggactgaaggatccacactggagactg
gaagctctcagggtggagcctgctggactcccattcttgacaccaggtctgaggaagtat
tcctgtcaactcaccatcgacacaaacacagtgagcagaaaactcaaactgtctaaagac
aacaggaaggtgacatgggaggagcttcagtcatatcctgatcatccagacagatttgat
cttcctcagctgctgtgtagaactggtctgactggtcgctgttactgggaggttgagtgg
agaggagaagttgatatatcagtgagttacagaagaatcaagaggaaaggagacaataga
gactgtttgtttggagggaatgatcattcctggagtctgagatgctctgattttgttggt
tactgtgtctggcacaataacagaaaagcttgtctctcctcctcctctgtctctaacaga
gtagcagtgtatgtggactgtcctgctggcattctgtccttctacagaatttcctctgac
tcactgatcctcctccacaccttcaacaccacattcactgaacctctgattcctggaatt
acagtctggtccagttatggttcgtcactgtttctgtgctga
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