Xiphophorus hellerii (green swordtail): 116724448
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Entry
116724448 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724448
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724448
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
LRR_6
PRY
SPRY
LRR_4
LRR_1
AFG1_ATPase
LRR_8
Motif
Other DBs
NCBI-GeneID:
116724448
NCBI-ProteinID:
XP_032426057
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Position
8:complement(5325332..5343549)
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AA seq
1134 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPEPSCVSFKSDWSKVEPIDF
KSPGSPPSERVDQQSSEVPSCPSAQQHQTQLDSIFMTLEDNIVTFLKNELKKIHKILSPN
DPECSESQRDDDEVLEGEDEEQRRSSREAVMKITLNFLRKMKQEELADRLESKRLAAVCQ
HQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKT
HRPETTIRQEDIFKVQPRRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIF
PFTFRELNVLKEKKFSLVELVHHFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEI
LTDATESTSVVVLLTNLIRGKLLPSALLWITTRPAATNQIPPQCVGMVTEVRGFNDPQKE
EYFRKRFRDKQQVSRIISHMKTSRSLHIMCHIPVFCWITATVLQDVLETREGGELPRTLT
EMYIHFLVVQTKVKKVKYDGGAETDPNWSPESRKMIESLGKLAFDQLQKGNLIFYESDLT
ECGINIRAASVYSGVFTQIFKEERGLYQDKVFCFIHLSVQEFLASLHVHLTFINSGVNLL
EENPPSFFSKFYYKSNINNLHQRAVDQALQSPNGHLDLFLRFLLGLLLQTNQRLLKGLLT
KTGSSSQTNQETVQYIKEKINENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTD
KLSPAQWSALGFILVSSGKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSDCNLSERS
CEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCILETLRLSGCNLSERSCE
ALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASL
ASALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVPFLTPGLRKY
SCQLTIDTNTVNRELKLSEDNRKVTWEELLSYPDHPDRFDYWYQLLCRTGLTGRCYWEVK
WRGIVYISVSYRRIRRKGNSGDCLFGYNDHSWSLRCSDYVGYSVCHNKIKTRLSSSSVSN
IVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFGFWFSSGSSVFLC
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaacccagctgtgtgtcctttaagagcgactggtcaaaggttgagcccattgacttt
aaatctcctggatctccaccatcagagagagtggaccagcagagctcagaggttcccagt
tgtccgtctgcccagcaacatcaaacacaactggactccatatttatgacgctggaggac
aacattgtcacttttctgaagaacgagctgaagaagatccataagattctgagtccaaat
gacccagaatgctcagagagtcagagagatgatgatgaggtgttggaaggtgaggatgaa
gagcagaggaggagcagcagagaggcagtgatgaagatcacactgaacttcctgaggaag
atgaagcaggaggagctggctgaccgtctggagagcaaacgtcttgctgcagtttgtcaa
catcaacttaaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaa
gcaggaagtccaacccttctgaaccagatctacacagagctctacatcacagagggaggg
actggagaagtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaaca
cacagaccagaaacaacaatcagacaagaagacatctttaaagtccaacctagaagagat
caaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcctaaca
caaaagttcactctggactgggctgaagacaaagcccaccagaacatccagttcatattt
ccattcaccttcagagaactgaatgtgctgaaggagaaaaagttcagcttggtggaactt
gttcatcacttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttttg
ttcatctttgatggtctggatgagagtcgacttcctctggacttccacaacaaggagatc
ctgactgatgctacagagtccacctcagtggtggttctgctgacaaacctcatcaggggg
aaactgcttccctctgctctcctctggataaccacacgacctgcagcaaccaatcagatc
cctcctcagtgtgttggcatggtgacagaggtcagagggttcaatgacccacagaaggag
gagtacttcaggaagagattcagagataagcagcaggtcagcaggatcatctcccacatg
aagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctgcaggatgtgttggagaccagagagggaggagagctgcccagaaccctgact
gagatgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgatgga
ggagctgaaacagatccaaactggagtccagagagcaggaagatgattgagtctctggga
aaactggcctttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgaca
gagtgtggcatcaatatcagagcagcctcagtgtactcaggagtgttcacacagatcttt
aaagaggagagagggctgtaccaggacaaagtgttctgcttcatccatctgagtgttcag
gagtttctggcttctcttcatgttcatttgaccttcatcaactctggggtcaacctgttg
gaagaaaatccaccatcatttttttctaaattttattacaaatcaaatataaataatctc
catcagagagctgttgaccaggccttacagagtccaaatggacacctggacttgttcctc
cgcttcctcctgggacttttactgcagaccaatcagagactcctaaaaggtctgctgaca
aagacaggaagtagctcacagaccaatcaggaaacagttcagtacatcaaggagaaaatc
aatgaaaatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaat
gatcgttctctagtggaggagatccaacagtctctgagttcaggaagtctctccacagat
aaactgtctcctgctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaagat
ctggatgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgttg
ccagtggttaaagcctccaacaaagctctactgagtgactgtaacctctcagagagaagc
tgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctg
agtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtcca
aactgcatcctggaaactctcagactgagtggctgtaacctctcagagagaagctgtgaa
gctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaac
aacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgc
aacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctg
gcctcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcat
ccaggagactcaggagtgaagctgctgtcagctggactgaaggatccacactggagactg
gaagctctcagggtggagcctgctggagtcccattcttgacaccaggtctgaggaagtat
tcctgtcaactcaccatcgacacaaacacagtgaacagagaactcaaactgtctgaagac
aacaggaaggtgacatgggaggagcttctgtcataccctgatcatccagacagatttgat
tactggtatcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtcaag
tggagaggaatagtttatatatcagtgagttacagaagaatcaggaggaaaggaaacagt
ggagactgtttgtttggatataatgatcattcctggagtctgagatgctctgattatgtt
ggttactctgtctgtcacaataagataaaaactcgtctctcctcctcctctgtctctaac
atagtagcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctct
gactcactgatcctcctccacaccttcaacaccacattcactgaacctctgattcctgga
tttgggttctggttcagttctggttcctcagtgtttctgtgctga
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