Xiphophorus hellerii (green swordtail): 116724449
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Entry
116724449 CDS
T07363
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724449
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724449
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
LRR_6
NOD2_WH
PRY
LRR_1
SPRY
LRR_4
AFG1_ATPase
LRR_8
Motif
Other DBs
NCBI-GeneID:
116724449
NCBI-ProteinID:
XP_032426058
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Position
8:complement(2714691..2731625)
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AA seq
1133 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPEPSCVSFKSNDSKDAFIDF
KSPGSPPSERVDQQSSEVPRGPSAQQHQTQLDSIFMLLEDNIVTFVKKELKKIQKGLSPD
YPEHSESQRDDEVLEGEDEEQRRSSREAVMKITLNFLRRMKQEKLADHLQSRHFAAVCQY
QLKSGLKKKLQSVFEGIAKAGRPTLLNQIYTELYITEGGTGEVNGEHEVRQIEKASRKSH
RPETTIRQEDIFKVPPGRDQPIRTMMTKGVAGIGKTVLTQKFILDWAEGKAHQNIQFIFP
FTFRELNMLKEKTFSLVELVHHFFTETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEIL
TDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQSVGMVTEVRGFNDPQKEE
YFRKRFRDKKQASRVISHIETSQILHIMCHIPVFCWITGTVLEDVLETREGVELPSTLTE
MYINFLVVQTKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTE
CGIDVRAASVYSGVFTQIFKEERGLYQDKVFCFIHLSVQEFLAALHVHLTFINSGVNLMK
ETQTSRKSSLFNKPKLKSLHRRAVNLALQSPNGHLDLFLRFLLGLSLQTNEKLLQGLLTE
TGSSSQTNQKTVQYIKKKISENKSVEKSINLFHCLNELNDRSLVEEIQQSVSSGSLSTDK
LSPAQWSVLVFILLSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKALLSGCNLSERSC
EALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSVGLKSPNCNLETLRLSYCNLSERSCEA
LSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLA
SALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLETLRVEPAGVPFLTPGLRKYS
CQLTIDTNTVSRFLKLSEDNRKVTCVKELQSYPDHPDRFDNWNQLLCRTGLTGRCYWGVE
WRGEVEISVSYRRIRRKGISRDCVFGLNDHSWSLRCSDADGYSVWHNNSSTPLSSSSVSN
RVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFWFCFHGSSVFLC
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaacccagctgtgtgtcctttaagagcaacgattccaaagatgctttcattgacttt
aaatctcctggatctccaccatcagagagagtggaccagcagagctcagaggttcccagg
ggtccatctgcccagcagcatcaaacacagctggactccatatttatgctgctagaggac
aacattgttacttttgtgaagaaagaactgaagaagatccagaaaggtctgagtccagat
tacccagaacattcagagagtcagagggatgatgaggtgttggaaggtgaggatgaagaa
cagagaaggagcagcagagaggcagtgatgaagatcacactgaacttcctgaggaggatg
aagcaggaaaagctggctgaccatttgcagagcagacattttgctgcagtttgtcaatat
caacttaaatctggtctgaagaagaagttgcagtctgtgtttgaggggattgctaaagca
ggaagaccaacccttctgaaccagatctacacagagctctacatcacagagggagggact
ggagaggtcaatggtgaacatgaggtcagacagattgaaaaagcatccaggaaatcacac
agaccagaaacaacaatcagacaagaagacatctttaaagtcccacctggaagagatcaa
ccaatcagaacaatgatgacaaagggagtggctggcattgggaaaacagtcctaacacag
aagttcattctggactgggctgaaggtaaagcccaccagaacatccagtttatatttcca
ttcaccttcagagaactgaatatgctgaaagagaaaacgttcagcttggtggaacttgtt
catcacttctttactgaaaccaaagaaatctgcagctttgaacacttccaggttctgttc
atctttgatggcctggatgagagtcgacttcctctggacttccacaacaaggagatcctg
actgatgctacagagtccacctcagtggacgttctgctgacaaacctcatcagggggaag
ctgcttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccct
cctcagtctgttggcatggtaacagaggtcagagggttcaatgacccacagaaggaggag
tacttcaggaagagattcagagataagaaacaggccagcagggtcatctcccacatagag
acatcacaaatcctccacatcatgtgccacatcccagtcttctgctggatcactggtaca
gttctggaggatgtgttagagaccagagagggagtagagctgcccagcaccctgactgag
atgtacatcaacttcctggtggttcagaccaaagtgaagaaggtcaagtatgatggagga
gctgaaacagatccacactggagtccagagagcaggaagatgattgagtctctgggaaaa
ctggcttttgatcagctgcagaaaggaaacttgatcttctatgaatcagacctgacagag
tgtggcattgatgtcagagcagcctcagtgtactcaggagtgttcacacagatctttaaa
gaggagagaggtctgtaccaggacaaggtgttctgcttcatccatctgagtgttcaggag
tttctggctgctcttcatgttcatctgaccttcataaactctggtgtcaacctgatgaaa
gaaacacaaacatctaggaagtcttcattatttaataaacctaaactaaagtctctccat
cgcagagctgttaacctggccttacagagtccaaatggacacctggacttgttcctccgc
ttcctccttggactttcactgcagaccaatgagaaactcctacaaggtctgctgacagag
acaggaagtagctcacagaccaatcagaaaacagttcagtacatcaagaaaaaaatcagt
gaaaataagtctgtagagaaaagcatcaatctgttccactgtctgaatgaactgaatgat
cgttctctagtggaggagatccaacagtctgtgagttcaggaagtctctccacagataaa
ctgtctcctgctcagtggtcagttttggttttcatcttactgtcatcaggaaaagatctg
gatgtgtttgacctgaagaaatactctgcttcagaggaggttcttctgaggctgctgcca
gtggttaaagcctccaacaaagctctactgagtggctgtaacctctcagagagaagctgt
gaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagt
aacaacaacctgcaggactcaggagtgaagcttctctctgttggactgaagagtccaaac
tgcaacctggaaactctcagactgagttactgtaacctctcagagagaagctgtgaagct
ctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaacaac
aacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaac
ctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctggcc
tcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcatcca
ggagactcaggagtgaagctgctgtcggctggactgaaggatccacactggagactggaa
actctcagggtggagcctgctggagtcccattcttgacaccaggtctgaggaagtattcc
tgtcaactcaccatcgacacaaacacagtgagcagattcctcaaactgtctgaagacaac
aggaaggtgacatgtgtgaaggagcttcagtcatatcctgatcatccagacagatttgat
aattggaatcagctgctgtgtagaactggtctgactggtcgctgttactggggggtcgag
tggagaggagaagttgagatatcagtgagttacagaagaatcaggaggaaaggaatcagt
agagactgtgtgtttggattgaatgatcattcctggagtctgagatgctctgatgctgat
ggttactctgtctggcacaataacagttcaactcctctctcctcctcctctgtctctaac
agagtagcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctct
gactcactgatcctcctccacaccttcaacaccacattcactgaacctctgattcctgga
ttctggttctgttttcatggttcctcagtgtttctgtgctga
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