Xiphophorus hellerii (green swordtail): 116724450
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Entry
116724450 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724450
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724450
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
116724450
NCBI-ProteinID:
XP_032426059
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Position
8:complement(3940964..3963081)
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AA seq
1130 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRLKPEPEPEPSCVSFKSDRSKDVITHFKSPG
SPPSERMDQQSSEVPNGPSVQQHQMQLDSIFMLLEDNIVTFVKNELKKIQKVLSPDNTEC
SKSQRDDDEVLEGEDEEQRRSSREAVMKITLNFLRRMKQAELADRLEIKQFAAVCQHQLK
SGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGSGEVNDEHEVRQIETASRKTHRPE
TTIRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIFPFTF
RELNLLKEKKFSLVELVHHFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTDA
TESTSVDVLLTNLIRGKMLPSALLWITTRPAAANQIPPQCVDMVTEVRGFNDPQKEEYFR
KRFRDKQQASRIISHMKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPSTLTEMYI
HFLVVQTKVMKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLHKGNLIFYESDLTECGI
DIRAASVYSGVFTEIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLMEETQ
TSKKFLLFNKPKIISLHQRAVDQALQSPNGQLDLFLRFLVGLSLPTNQRLLQGLLTQTGS
SSQTNQETVQYIKEKINENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDKLSP
AQWSALGFILVSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKVLLSGCNLSERSCEAL
SSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLRLSGCNLSERSCEALSS
VLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLASAL
TSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVPFLTPGLRKYSCQL
TIDTNTVNRKLKLSEDGRKVTCVKELQSYPDHPERFDNWDQLLCRTGLTGRCYWEVEWRG
KVDISVSYRRIKRKGNSRDCVFGYNDHSWSLNCSDGGYSVWHNNIETRLSSSSVSNRVAV
YVDCPAGILSFYRVSSDSLILLHTFNITFTEPLIPGFGFWFSSGSSVFLC
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagagactcaaaccagaaccagaaccagaacccagc
tgtgtgtcctttaagagtgacaggtcaaaagatgtgatcactcactttaaatctcctgga
tctccaccatcagagagaatggaccagcagagctcagaggttcccaatggtccatctgtc
cagcagcatcaaatgcagctggactccatatttatgctgctggaggacaacattgtcact
tttgtgaaaaatgagttgaaaaagattcagaaggttctgagtcctgataacacagaatgt
tcaaaaagtcagagagatgatgatgaagtgttggaaggtgaggatgaagaacagaggagg
agcagcagagaggcagtgatgaagatcacactgaacttcctgcggaggatgaagcaggcg
gagctggctgaccgtctggagatcaaacaatttgctgcagtttgtcaacatcaacttaaa
tctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaagcaggaagtcca
acccttctgaaccagatctacacagagctctacatcacagagggagggagtggagaggtc
aatgatgaacatgaggtcagacagattgaaacagcatccaggaaaacacacagaccagaa
acaacaatcagacaagaagacatctttaaagtcccacctggaagagatcaaccaatcaga
acagtgatgacaaagggagtggctggcattgggaaaacagtcctaacacagaagttcact
ctggactgggctgaagacaaagcccaccagaacatccagttcatatttccattcacgttc
agagagctgaatttgctgaaagagaaaaagttcagtttggtggaacttgttcatcatttc
tttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctgttcatctttgat
ggactggatgagagtcgacttcctctggacttccacaacaaggagatcctgactgatgct
acagagtccacctcagtggacgttctgctgacaaacctcatcagggggaaaatgcttccc
tctgctctcctctggataaccacacgacctgcagctgccaatcagatccctcctcagtgt
gttgacatggtgacagaggtcagagggttcaatgacccacagaaggaggagtacttcagg
aagagattcagagataagcagcaggccagcaggatcatctcccacatgaagacatcacga
agcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggag
gatgtgttggagaccagagagggaggagagctgcccagcaccctgactgagatgtacatc
cacttcctggttgttcagaccaaagtgatgaaggtcaagtatgatggaggagctgaaaca
gatccacactggagtccagagagcaggaagatgattgagtctctgggaaaactggctttt
gatcagctgcataaaggaaacctgatcttctatgaatcagacctgacagagtgtggcatc
gatatcagagcagcctcagtgtactcaggagtgttcacagagatctttaaagaggagaga
gggctgtaccaggacaaggtgttctgctttgtccatctgagtgttcaggagtttctggct
gctcttcatgttcatctgaccttcatcaactctggtgtcaacctgatggaagaaacacaa
acatctaagaagtttttattatttaataaacctaaaataatttctctccaccagagagct
gttgaccaggccttacagagtccaaatggacagctggacttgttcctccgcttcctcgtt
ggactttcactcccgaccaatcagagactcctacaaggtctgctcacacaaacaggaagt
agctcacagaccaatcaggaaacagttcagtacatcaaggagaagatcaatgagaatgtg
tctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgttctcta
gtggaggagatccaacagtctctgagttcaggaagtctctccacagataaactgtctcct
gctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaagatctggatgtgttt
gacctgaagaaatactctgcttcagaggaggttcttctgaggctgctgccagtggttaaa
gcctccaacaaagttctactgagtggctgtaacctctcagagagaagctgtgaagctctg
tcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaacaacaac
ctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaacctg
gaaactctcagactgagtggctgtaacctctcagagagaagctgtgaagctctgtcctca
gttctcagctcccagtcctccagtctcagagaactggacctgagtaacaacaacctgcag
gattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaacctggaaact
ctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctggcctcagctctg
acctccaacccctcccatctgaaagagttggacctgagctacaatcatccaggagactca
ggagtgaagctgctgtcggctggactgaaggatccacactggagactggaagctctcagg
gtggagcctgctggagtcccattcttgacaccaggtctgaggaagtattcctgtcaactc
accatcgacacaaacacagtgaacagaaaactcaaactgtctgaagacggcaggaaggtg
acatgtgtgaaggagcttcagtcatatcctgatcatccagaaagatttgataactgggat
cagctgctgtgtagaactggtctgactggtcgctgttactgggaggttgagtggagagga
aaagttgatatatcagtgagttacagaagaatcaagaggaaaggaaacagtagagactgt
gtgtttggatataatgatcattcctggagtctgaactgctctgatggtggttactctgtc
tggcacaataacatagaaactcgtctctcctcctcctctgtctctaacagagtagcagtg
tatgtggactgtcctgctggcattctgtccttctacagagtttcctctgactcactgatc
ctcctccacaccttcaacatcacattcactgaacctctgattcctggatttgggttctgg
ttcagttctggttcctcagtgtttctgtgctga
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