Xiphophorus hellerii (green swordtail): 116724458
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Entry
116724458 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724458
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724458
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
116724458
NCBI-ProteinID:
XP_032426068
LinkDB
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Position
8:complement(5743849..5765282)
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AA seq
1073 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPSCVSFKSDRSKDKFITFKS
PGSPPSERVDQQSSEVHSGLSAQQHQTQLDSIFMMLEDNIVTFLKNELKKIHKILSPNDP
ECTESQRDDDEVLEGEDEDQRRSSREAVMKITLNFLRKMKQEELADRLQKRLAPVCQHQL
KSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPHRP
ETTVRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQLIFPLT
FRELNVLKEKKFSLVELVHYFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTD
ATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVGMVTEVRGFNDPQKQEYF
RKRFRDKEQASKIISHVKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPRTLTEMY
IHFLVVQTKVKKVKFDGGAETDPHWSPESRKMIKSLGKLAFDQLQKGNLIFYESDLTECG
INIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLMEES
FTLQTASLFNKPELKSLHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLLTETG
SSSQTNQETVQYIKEKISQNVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDKLS
PAQWSALGFILVSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKALLSYCNLSERSCEA
LSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLA
SALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGGRFLTPGPWRYS
CQLTIDTNTVSRKLKLSEDNRKVTRVKELQSYPDHPDRFDYWNQLLCRTGLTGRCYWEVE
WRGGVYISVSYRRIRRKGNSGDCLFGYNDHSWSLSCSDVHGYSVWHNDRETRLSSSVSNR
VAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFWFWSSSGSSVFLC
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagagaatccatcaaagactcaaaccagaaccagaa
cccagctgtgtgtcctttaagagtgacaggtcaaaggataaattcattacctttaaatct
cctggatctccaccatcagagagagtggaccagcagagctcagaggttcacagtggtctg
tctgcccagcagcatcaaacacagctggactccatatttatgatgctggaggacaatatt
gtcacctttctgaagaacgaactgaagaaaatccataagattctgagtccaaatgaccca
gaatgcacagagagtcagagagatgatgatgaggtgttggaaggtgaggatgaagatcag
aggaggagcagcagagaggcagtgatgaagatcacactgaacttcctgcggaagatgaag
caggaggagctggctgaccgtctgcagaaacgtcttgctccagtttgtcaacatcaactt
aaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaagcaggaagt
ccaacccttctgaaccagatctacacagagctctacatcacagagggagggactggagag
gtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccacacagacca
gaaacaacagtcagacaagaagacatctttaaagtcccacctggaagagatcaaccaatc
agaacagtgatgacaaagggagtggctggcattgggaaaacagtcctaacacagaagttc
actctggactgggctgaagacaaagcccaccagaacatccagctcatttttccattaacg
ttcagagagctgaatgtgctgaaagagaaaaagttcagcttggtggaacttgttcattat
ttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctgttcatcttt
gatggcctggatgagagtcgacttcctctggacttccacaacaaggagatcctgactgat
gctacagagtccacctcagtggacgttctgctgacaaacctcatcagggggaaactgctt
ccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccctcctcag
tgtgttggcatggtaacagaggtcagagggttcaatgacccacagaagcaggagtacttc
aggaagagattcagagataaggagcaggccagcaagatcatctcccacgtgaagacatca
cgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctg
gaggatgtgttggagaccagagagggaggagagctgcccagaaccctgacagagatgtac
atccacttcctggtggttcagaccaaagtgaagaaggtcaagtttgatggaggagctgaa
acagatccacactggagtccagagagcaggaagatgatcaagtctctgggaaaactggct
tttgatcaactgcagaaaggaaacctgatcttctatgaatcagacctgacagagtgtggc
atcaatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaagaggag
agaggtctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctg
gctgctcttcatgttcatctgacctttatcaactctggtgtcaacctgatggaagaatca
tttacacttcagacagcctcgttatttaataaacctgaactaaaatctctccatcagaga
gctgttgaccaggccttacagagtccaaatggacacctggatttgttcctccgcttcctc
ctgggactttcactgcagaccaatcagagactcctacaaggtctgctgacagagacagga
agtagctcacagaccaatcaggaaacagttcagtacatcaaggagaagatcagtcagaat
gtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgttct
ctagtggaggagatccaacagtctctgagttcaggaagtctctccacagataaactgtct
cctgctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaagatctggatgtg
tttgacctgaagaaatactctgcttcagaggaggttcttctgaggctgctgccagtggtt
aaagcctccaacaaagctctactgagttactgtaacctctcagagagaagctgtgaagct
ctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaacaac
aacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaac
ctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctggcc
tcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcatcca
ggagactcaggagtgaagctgctgtcggctggactgaaggatccacactggagactggaa
gctctcagggtggagcctgctggaggccgattcttgacaccaggtccatggagatattcc
tgtcaactcaccatcgacacaaacacagtgagcagaaaactcaaactgtctgaagacaac
aggaaggtgacacgtgtgaaggagcttcagtcatatcctgatcatccagacagatttgat
tactggaatcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtcgag
tggagaggaggagtttatatatcagtgagttacagaagaatcaggaggaaaggaaacagt
ggagactgtttgtttggatataatgatcattcctggagtctgagctgctctgatgttcat
ggttactctgtctggcacaatgatagagaaactcgtctctcctcctctgtctctaacaga
gtagcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctctgac
tcactgatcctcctccacaccttcaacaccacattcactgaacctctgattcccggattc
tggttctggtccagttctggttcctcagtgtttctgtgctga
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