Xiphophorus hellerii (green swordtail): 116724460
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Entry
116724460 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724460
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724460
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
LRR_1
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
116724460
NCBI-ProteinID:
XP_032426069
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Position
8:4790887..4801421
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AA seq
1078 aa
AA seq
DB search
MDQSEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPGPSCVSFKSDGSKGVILNF
KSPGSPPSERVDQQSSEVPSCPSAQQRQTQLDSIFMTLEDNIVTFLKNELKKIHKILSPD
YPECSESQREDDEVLEGEDEEQRRSSREAVMKITLNFLRRMKQEELADCMQKHLAAVCQH
QLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPD
RPETTIRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIFP
FTFRELNVLKEKRFSLVELVHHFFSETKEICNFEHFQVLFIFDGLDESRLPLDFHNKKIL
TDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVDMVTEVRGFNDPQKEE
YFRKRVRDKEQASRIISHMKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPRTLTE
MYIHFLVVQTKVKKVKYDGGAETDPHWSPESRKMIKSLAKLAFDQLQKGNLIFYESDLTE
CGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFIHLSVQEFLAALHVHRTFINSGVNLME
ESFTLQTASLFNKPELKSLHQRAVDQALLSPNGHLDLFLRFLLGLSLQTNQRLLQGLLTQ
TGSRSQTNQETVQYIKEKISKNVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDK
LSPAQWSALGFILVSPGKDLDVFDLKKYSASQEALLRLLPVVKASNKALLSGCNLSERSC
EALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCAS
LASALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVPFLTPGLWR
LKRYSCQLTIDTNTVNRNIKLSEDNRKVTFVEKLQSYPDHPDRFDFPQLLCRTGLTGRCY
WEVEWRGDVYISVSYRRIRRKGYSRDCWFGGNDHSWRLSCSDVDGYSVCHNNIETRLSSS
SVSNRVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFWFCFYGSSSVFLC
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtctgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccaggacccagctgtgtgtcctttaagagtgacgggtcaaagggtgtgatccttaacttt
aaatctcctggatctccaccatcagagagagtggaccagcagagctcagaggttcccagt
tgtccgtctgcccagcagcgtcaaacacagctggactccatatttatgacgctggaggac
aatattgtcacttttctgaagaacgaactgaagaagatccataaaattctgagtccagat
tacccagaatgctcagagagtcagagagaggatgatgaggtgttggaaggtgaggatgaa
gagcagaggaggagcagcagagaggcagtgatgaagatcacactgaacttcctgaggagg
atgaagcaggaggagctggctgactgtatgcagaaacatcttgctgcagtttgtcaacat
caacttaaatctggtctaaagaagaagttccagtctgtgtttgagggaattgctaaagca
ggaagtccaacccttctgaaccagatctacacagagctctacatcacagagggagggact
ggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagac
agaccagaaacaacaatcagacaagaagacatctttaaagtcccacctggaagagatcaa
ccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcctaacacag
aagttcactctggactgggctgaagacaaagcccaccagaacatccagttcatatttcca
ttcaccttcagagagctgaatgtgctgaaggagaaaaggttcagcttggtggaacttgtt
catcacttctttagtgaaaccaaagaaatctgcaactttgaacacttccaggttctgttc
atctttgatggtctggatgagagtcgacttcctctggacttccacaacaagaagatcctg
actgatgctacagagtccacctcagtggacgttctgctgacaaacctcatcagggggaaa
ctacttccttctgctctcctctggataaccacacgacctgcagcagccaatcagatccct
cctcagtgtgttgacatggtaacagaggtcagagggttcaatgacccacagaaggaggag
tacttcaggaagagagtcagagataaggagcaggccagcaggatcatctctcacatgaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgctggattactgctaca
gttctggaggatgtgttggagaccagagagggaggagagctgcccagaaccctgacggag
atgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgatggagga
gctgaaacagatccacattggagtccagagagcaggaagatgatcaagtctctggcaaaa
ctggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaa
gaggagagaggtctgtaccaggacaaggtgttctgcttcatccatctgagtgttcaggag
tttctggctgctcttcatgttcatcggaccttcatcaactctggtgtcaacctgatggaa
gaatcatttacacttcagacagcctcgctatttaataaacctgaactaaaatctctccat
cagagagctgttgaccaggccttactgagtccaaatggacacctggacttgttcctccgc
ttcctcctgggactttcactgcagaccaatcagagactcctacaaggtctactaacacag
acaggaagtaggtcacagaccaatcaggaaaccgttcagtacatcaaggagaagatcagt
aagaatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgat
cgttctctagtggaggagatccaacagtctctgagttcaggaagtctctccacagataaa
ctgtctcctgctcagtggtcagctctgggtttcatcttagtgtcaccaggaaaagatctg
gatgtgtttgacctgaagaaatactctgcttcacaggaggctcttctgaggctgctacca
gtggttaaagcctccaacaaagctctactgagtggctgtaacctctcagagagaagctgt
gaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagt
aacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaaaagtccaaac
tgcaacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttct
ctggcctcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaat
catccaggagactcaggagtgaagctgctgtcggctggactgaaggatccacactggaga
ctggaagctctcagggtggagcctgctggagtcccattcttgacaccaggtctatggaga
ctgaaaagatattcctgtcaactcaccatcgacacaaacacagtgaacagaaacatcaaa
ctgtctgaagacaacaggaaggtgacatttgtggagaagcttcagtcatatcctgatcat
ccagacagatttgattttcctcagctgctgtgtagaactggtctgactggacgctgttac
tgggaggtcgagtggagaggagatgtttatatatcggtgagttacagaagaatcaggagg
aaaggatacagtagagactgttggtttggagggaatgatcattcctggaggctgagctgc
tctgatgttgatggttactctgtctgtcacaataacatagaaactcgtctctcctcctcc
tctgtctctaacagagtagcagtgtatgtggactgtcctgctggcattctgtccttctac
agagtttcctctgactcactgatcctcctccacaccttcaacaccacattcactgaacct
ctgattcctggattttggttctgtttttatggttcctcctcagtgtttctgtgctga
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