Xiphophorus hellerii (green swordtail): 116724462
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Entry
116724462 CDS
T07363
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 5-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724462
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724462
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
AFG1_ATPase
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
116724462
NCBI-ProteinID:
XP_032426072
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Position
8:complement(5975079..5985918)
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AA seq
1074 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPEPSCVSFKSDWSKDEVINF
KSPGSPPSERVDQQSSEVHSGPSAQQHQTQLDSIFMTLEDNIVIFLKNELKKIHKILSPN
DPECSESQRDDDVLEGEDEEQRRSSREAVMKITLNFLRRMKQEELADRLQSSLAAVCQHQ
LKSGLKKKFQSVFEGIAKAGSPTVLNQIYTELYITEGGTGEVNDEHEVRQIEAASRKPHR
PETSIRQEEIFKVPPGRDQPIRTMMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIFPF
TFRELNVLKEKKFSLVELVHHFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILT
DATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVGMVTEVRGFNDQQKEEY
FRNRFRDKQQASRIISHMKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPRTLTEM
YIHFLVVQTKVKKVKYDGGAETDPHWSPESRKMIKSLGKLAFDQLQKGNLIFYESDLTEC
GINIRAASMYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLLEE
NPPSFFSKSYYKSNINDLHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLLTQT
RSSSQTNQETVQYIKEKINENVSAEKSINLFHCLNELNDRSLVKEIQQSLSSGSLSTDKL
SPAQWSALGFILVSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKALLSGCNLSERSCE
ALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASL
ASALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVPFLTPGLRKY
SCQLTIDTNTVNRKLKLSEDNRKVTCVKELQSYPDHPDRFDYWDQLLCRTGLTGRCYWEV
KWRGGVYISVSYRRIRRKGNITDCWFGYNDHSWSLRCSDDGYSVCHNNRQTRLSSSSVSN
RVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFGFWSSYGSSVFLC
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaacccagctgtgtgtcctttaagagcgactggtcaaaggatgaagtcattaacttt
aaatctcctggatctccaccatcagagagagtggaccagcagagctcagaggttcacagt
ggtccgtctgcccagcagcatcaaacacagctggactccatatttatgacgctggaggac
aatattgtcatttttctgaagaacgagctgaagaagatccataagattctgagtccaaat
gacccagaatgctcagagagtcagagagatgatgatgtgttggaaggtgaggatgaagag
cagaggaggagcagcagagaggcagtgatgaagatcacactgaacttcctgaggaggatg
aagcaggaggagctggctgaccgtctgcagagcagtcttgctgcagtttgtcaacatcaa
cttaaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaagcagga
agtccaaccgttctgaaccagatctacacagagctctacatcacagagggagggactgga
gaggtcaatgatgaacatgaggtcagacagattgaagcagcatccaggaaaccacacaga
ccagaaacatcaatcagacaagaagaaatctttaaagtcccacctggaagagatcaacca
atcagaacaatgatgacaaagggagtggctggcattgggaaaacagtcctaacacagaag
ttcactctggactgggctgaagacaaagcccaccagaacatccagttcatatttccattc
acattcagagagctgaatgtgctgaaagagaaaaagttcagcttggtggaacttgttcat
cacttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctgttcatc
tttgatggtctggatgagagtcgacttcctctggacttccacaacaaggagatcctgact
gatgctacagagtccacctcagtggacgttctgctgacaaacctcatcagggggaaactg
cttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccctcct
cagtgtgttggcatggtgacagaggtcagagggttcaatgaccaacagaaggaggagtac
ttcaggaatagattcagagataagcagcaggccagcaggatcatttcccacatgaagaca
tcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagtt
ctggaggatgtgttgaagaccagagagggaggagagctgcccagaaccctgactgagatg
tacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgatggaggagct
gaaacagatccacactggagtccagagagcaggaagatgatcaagtctctgggaaaactg
gcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagagtgt
ggcatcaatatcagagcagcctcaatgtactcaggagtgttcacacagatctttaaagag
gagagaggtctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagttt
ctggctgctcttcatgttcatctgaccttcatcaactctggtgtcaacctgttggaagaa
aatccaccatcatttttttctaaatcttattacaaatcaaatataaatgatctccatcag
agagctgttgaccaggccttacagagtccaaatggacaccttgacttgttcctccgcttc
ctcctgggactttcactgcagaccaatcagagactcctacaaggtctgctgacacaaaca
cgaagtagctcacagaccaatcaggaaacagttcagtacatcaaggagaagatcaatgag
aatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgt
tctctagtgaaggagatccaacagtctctgagttcaggaagtctctccacagataaactg
tctcctgctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaagatctggat
gtgtttgacctgaagaaatactctgcttcagaggaggttcttctgaggctgctgccagtg
gttaaagcctccaacaaagctctactgagtggctgtaacctctcagagagaagctgtgaa
gctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacttgagtaac
aacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgc
aacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctg
gcctcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcat
ccaggagactcaggagtgaagctgctgtcggctggactgaaggatccacactggagactg
gaagctctcagggtggagcctgctggagtcccattcttgacaccaggtctgaggaagtat
tcctgtcaactcaccatcgacacaaacacagtgaacagaaaactcaaactgtctgaagac
aacaggaaggtgacatgtgtgaaggagcttcagtcatatcctgatcatccagacagattt
gattactgggatcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtc
aagtggagaggaggagtttatatatcagtgagttatagaagaatcaggaggaaaggaaac
attacagactgttggtttggatataatgatcattcctggagtctgagatgctctgatgat
ggttactctgtctgtcacaataacagacaaactcgtctctcctcctcctctgtctctaac
agagtagcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctct
gactcactgatcctcctccacaccttcaacaccacattcactgaacctctgattcctgga
tttgggttctggtccagttatggttcctcagtgtttctgtgctga
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