Xiphophorus hellerii (green swordtail): 116724471
Help
Entry
116724471 CDS
T07363
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724471
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
LRR_1
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
116724471
NCBI-ProteinID:
XP_032426080
LinkDB
All DBs
Position
8:4417326..4432276
Genome browser
AA seq
1077 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDEPQRKRQRFHQSFTQEEEPKPSCVSFKSNNSMVHKIDL
KSPGPPSSERVDQQSSEVPSGPSAQQKQTQLDSIFMLLEDNIVTFVKKELKKIQKGLSPD
DTECSESRRDDDEVLEGDDEELRRSSGEAVMKITLNFMRRMKQEELADRLERHFAPVCEL
KLKYGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNHEHEVRQIETASRKTH
RPETTIRQEDIFKVSPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIFP
FTFRELNVMKEKKFSLVELVHHFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEIL
TDATEPTSMDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVDMVTEVRGFNDPQKEE
YFRKRFRDEEQASRIISHMKTSRSLHIMCHIPVFCWINATVLEDVLETREGGELPSTLTE
MYIHFLIVQTKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTE
CGIDITAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGSDMMK
ETQIPKKSALLNKSDLKSLHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLLTQ
TGSRSQTNQETVQYIKEKINENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDK
LSPAQWSALGFILVSSGKDLDVFDLKKYSASEKALLRLLPVVKASNKALLSGCNLSERSC
EALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCAS
LASALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVPFLTPGLRK
YSCQLTIDTNTVSRNIKLSEDNRKVTHVEELQSYPDHPGRFDNYPQLLCRTGLTGRCYWE
VEWRGGVYISVSYRRIRRKGISRDCWFGRNDHSWSLNCSDAKGYSVCHNNIETRLSSSSD
SNRVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFGVWRTWSGSSVFLC
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagccccagaggaaacgtcagaggttccatcagagtttcacacaagaagaagaa
ccaaaacccagctgtgtgtcctttaaaagcaacaattcaatggttcataagattgacttg
aaatctcctggaccgccatcatcagagagagtggaccagcagagctcagaggttcccagt
ggtccgtctgcccagcagaaacaaacacagctggactccatatttatgctgctggaggac
aatattgtcacttttgtgaagaaagaactgaagaagatccagaaaggtctgagtccagat
gacacagaatgttcagagagtcggagagatgatgatgaggtgttggaaggtgatgatgaa
gagctgaggaggagcagcggagaggcagtgatgaagatcacactgaacttcatgaggagg
atgaagcaggaggagctggctgaccgtctggagagacattttgctccagtttgtgaactt
aaacttaaatatggtctgaagaagaagttccagtcggtgtttgaggggattgctaaagca
ggaagtccaacccttctgaaccagatctacacagagctctacatcacagagggagggact
ggagaggtcaatcatgaacatgaggtcagacagattgaaacagcatccaggaaaacacac
agaccagaaacaacaatcagacaagaagacatctttaaagtctcacctggaagagatcaa
ccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcctaacacag
aagttcactctggactgggctgaagacaaagcccaccagaacatccagttcatatttcca
ttcacattcagagagctgaatgtaatgaaggagaaaaagttcagcttggtggaacttgtt
catcatttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctgttc
atctttgatggtctggatgagagtcgacttcctctggacttccacaacaaggagatcctg
actgatgctacagagcccacctcaatggacgttctgctgacaaacctcatcagggggaaa
ctgcttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccct
cctcagtgtgttgacatggtgacagaggtcagaggtttcaatgacccacagaaggaggag
tacttcaggaagagattcagagatgaggagcaggccagcaggatcatctcccacatgaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgttggatcaatgctaca
gttctggaggatgtgttggagaccagagagggaggagagctgcccagcaccctgactgag
atgtacatccacttcctgattgttcagaccaaagtgaagaaggtcaagtatgatggagga
gctgaaacagatccacactggagtccagagagcaggaagatgattgagtctctgggaaaa
ctggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcacagcagcctcagtgtactcaggagtgttcacacagatctttaaa
gaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctaagtgttcaggag
tttctggctgctcttcatgttcatctgacctttatcaactctggttctgacatgatgaaa
gaaacacaaatacctaagaaatctgcattacttaataaatctgacctaaagtctctccat
cagagagctgttgaccaggccttacagagtccaaatggacacctggacttgttcctccgc
ttcctcctgggactttcactgcagaccaatcagagactcctacaaggtctgctgacacag
acaggaagtagatcacagaccaatcaggaaacagttcagtacatcaaggagaagatcaat
gagaatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgat
cgttctctagtggaggagatccaacagtctctgagttcaggaagtctctccacagataaa
ctgtctcctgctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaagatctg
gatgtgtttgacctgaagaaatactctgcttcagagaaggctcttctgaggctgctgcca
gtggttaaagcctccaacaaagctctactgagtggctgtaacctctcagagagaagctgt
gaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagt
aacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaac
tgtaacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttct
ctggcctcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaat
catccaggagactcaggagtgaagctgctgtcggctggactgaaggatccacactggaga
ctggaagctctcagggtggagcctgctggagtcccattcttgacaccaggtctgaggaag
tattcctgtcaactcaccatcgacacaaacacagtgagcagaaacatcaaactgtctgaa
gacaacaggaaggtgacacatgtggaggagcttcagtcatatcctgatcatccaggcaga
tttgataactatcctcagctactgtgtagaactggtctgactggtcgctgttactgggag
gtcgagtggagaggaggagtttatatatcagtgagttacagaagaatcaggaggaaagga
atcagtagagactgttggtttggaaggaatgatcattcctggagtctgaactgctctgat
gctaagggttactctgtctgtcacaataacatagaaactcgtctctcctcctcctctgac
tctaacagagtagcagtgtatgtggactgtcctgctggcattctgtccttctacagagtt
tcctctgactcactgatcctcctccacaccttcaacaccacattcactgaacctctgatt
cctggatttggagtctggaggacctggtctggttcctcagtgtttctgtgctga
DBGET
integrated database retrieval system
