Xiphophorus hellerii (green swordtail): 116724479
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Entry
116724479 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724479
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724479
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
AFG1_ATPase
LRR_4
Motif
Other DBs
NCBI-GeneID:
116724479
NCBI-ProteinID:
XP_032426101
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All DBs
Position
8:4569499..4578743
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AA seq
982 aa
AA seq
DB search
MTLQDNIVAFLKHELKKIHKILSPNDPECSESQRDDDEVLEGDDEEQRRSSREAVMKITL
NFLRRMKQEELADRLQSKRLAPVCQQQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTEVY
ITEGGTGGVNDEHEVRQIETASRKPHRPETTVRQEDIFKVTPGRDQPIRTVMTKGVAGIG
KTVLTQKFTLDWAKDKAHQNIQFIFPFTFRELNVLKEKKFSLVELVHHFFSETKEICSFE
HFQVLFIFDGLDESRLPLDFHNKEILTDATESTSVDVLLTNLIRGKLLPSALLWITTRPA
AANQIPPQCVGMVTEVRGFNDPQKEEYFRKRFRDKEQASRIISYMKTSRSLHIMCHIPVF
CWITATVLEDVLETRQGGELPRTLTEMYIHFLVVQTKLKKVKYDGGAETDPHWSPESRKI
IKSLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFV
HLSVQEFLAALHVHLTFINFGVNLMEESFTLQTASLFNKPELKSLHQRAVDQALQNPNGH
LDLFLRFLLGLSLQTNQRLLQGLLTKTGSRSQPNQDTVQYIKEKINENVSAEKSINLFHC
LNELNDRSLVEEIQQSLSSGSLSTDKLSPAQWSALGFILVSSGKDLDVFDLKKYSASEEV
LLRLLPVVKASNKTLLSGCNLSDRSCAALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSA
GLKSPNCNLETLSLSGCLVSEEGCASLASALTSNPSHLKELDLSYNHPGESGVKLLSAGL
KDPDWRLEALRVEPAGVPFLTPGLRKYSCQLTIDTNTVSRNIKLSEDNRKVTCVKELQSY
PDHPDRFDFPQLLCRTGLTGRCYWEVEWRGDVYISVSYRRIRRKGYSRDCWFGGNDHSWS
LRCSDDDGYSVWHNDIVTPLSSSSVSNRVAVYVDCPAGILSFYRVSSDSLILLHTFNTTF
TEPLIPGFWVWSISGSSSVFLC
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgcaggacaacattgtcgcttttcttaagcatgagctgaagaagatccataag
attctgagtccaaatgacccagaatgttcagaaagtcagagagatgatgatgaggtgttg
gaaggtgatgatgaagaacagaggaggagcagcagagaggcagtgatgaagatcacactg
aacttcctgcggaggatgaagcaggaggagctggctgaccgtctgcagagcaaacgtctt
gctccagtttgtcaacaacaacttaaatctggtctgaagaagaagttccagtctgtgttt
gaggggattgctaaagcaggaagtccaacccttctgaaccagatctacacagaggtctac
atcacagagggagggactggaggggtcaatgatgaacatgaggtcagacagattgaaaca
gcatccaggaaaccacacagaccagaaacaacagtcagacaagaagacatttttaaagtc
acacctggaagagatcaaccaatcagaacagtgatgacaaagggagtggctggcattggg
aaaacagtcctaacacagaagttcactctggactgggctaaagacaaagcccaccagaac
atccagttcatatttccatttaccttcagagagctgaatgtgctgaaagagaaaaagttc
agcttggtggaacttgttcatcatttctttagtgaaaccaaagaaatctgcagctttgaa
cacttccaggttctgttcatctttgatggtctggatgagagtcgacttcctctggacttc
cacaacaaggagatcctgactgatgctacagagtccacctcagtggacgttctgctgaca
aacctcatcagggggaaactgcttccctctgctctcctctggataaccacacgacctgca
gcagccaatcagatccctcctcagtgtgttggcatggtaacagaggtcagagggttcaat
gacccacagaaggaggagtacttcaggaagagattcagagataaggagcaggccagcagg
atcatctcctacatgaagacatcacgaagcctccacatcatgtgccacatcccagtcttc
tgctggatcactgctacagttctggaggatgtgttggagaccagacagggaggagagctg
cccagaaccctgactgagatgtacatccacttcctggtggttcagaccaaattgaagaag
gtcaagtatgatggaggagcagaaacagatccacactggagtccagagagcaggaagata
atcaagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttttat
gaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtg
ttcacacagatctttaaagaggagagaggtctgtaccaggacaaggtgttctgcttcgtc
catctgagtgttcaggagtttttggctgctcttcatgttcatctgaccttcatcaacttt
ggtgtcaacctgatggaagaatcatttacacttcagacagcctcgttatttaataaacct
gaactaaaatctctccatcagagagctgttgaccaggccttacagaatccaaatggacac
ctggacttgttcctccgcttcctcctgggactttcactgcagactaatcagagactccta
caaggtctgctcacaaagacaggaagtagatcacagcccaatcaggatacagttcagtac
atcaaggagaagatcaatgaaaatgtgtctgcagagaaaagcatcaatctgttccactgt
ctgaatgaactgaatgatcgttctctagtggaggagatccaacagtctctgagttcagga
agtctctccacagataaactgtctcctgctcagtggtcagctctgggtttcatcttagtg
tcatcaggaaaagatctggatgtgtttgacctgaagaaatactctgcttcagaggaggtt
cttctgaggctgctgccagtggttaaagcctccaacaaaactctactgagtggctgtaac
ctctcagatagaagctgtgcagctctgtcctcagttctcagctcccagtcctccagtctc
agagaactggacctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgct
ggactgaagagtccaaactgcaacctggaaactctcagcttatcaggctgtttggtctca
gaggaaggctgtgcttctctggcctcagctctgacctccaacccctcccatctgaaagag
ttggacctgagctacaatcatccaggagaatcaggagtgaagctgctgtcggctggactg
aaggatccagactggagactggaagctctcagggtggagcctgctggagtcccattcttg
acaccaggtctgaggaaatattcctgtcaactcaccatcgacacaaacacagtgagcaga
aacatcaaactgtctgaagacaacaggaaggtgacatgtgtgaaggagcttcagtcatat
cctgatcatccagacagatttgattttcctcagctgctgtgtagaactggtctgactggt
cgctgttactgggaggtcgagtggagaggagatgtttatatatcagtgagttacagaaga
atcaggaggaaaggatacagtagagactgttggtttggagggaatgatcattcctggagt
ctgagatgctctgatgatgatggttactctgtctggcacaatgacatagtaactcctctc
tcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcattctg
tccttctacagagtttcctctgactcactgatcctcctccacaccttcaacaccacattc
actgaacctctgattcctggattttgggtctggtccatttctggttcctcttcagtgttt
ctgtgctga
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