Xiphophorus hellerii (green swordtail): 116724482
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Entry
116724482 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724482
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724482
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
AFG1_ATPase
LRR_4
Motif
Other DBs
NCBI-GeneID:
116724482
NCBI-ProteinID:
XP_032426107
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Position
8:complement(5091845..5180853)
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AA seq
979 aa
AA seq
DB search
MTLEDNIVTFLKNELKKIHKILSPNDPECTENQRDDDEVLEGQDEEQRSSSREAVMKITL
NFLRRMTQEELADRLESKRLAAVCQHQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELY
ITEGGTGEVNDEHEVRQIETASRKPDIPETTVRQEDIFKVQPGRDQPIRTVMTKGVAGIG
KTVLTQKFTLDWAEDKAHQNIQFIFPFTFRELNVLKEKKFSLVELVHHFFTETKEICSFE
HFQVLFIFDGLDESRLPLDFHNKEILTDATESTSVDVLLTNLIRGKLLPSALLWITTRPA
AANQIPPQCVGMVTEVRGFNDPQKEEYFRKRFRDKQQGSRIISHMKTSQSLHIMCHIPVF
CWITATVLEDVLETREGGELPRTLTEMYIHFLVVQTKVKKVKYDGGAETDPHWSPESRKM
IESLGKLAFDQLQKGNLIFYESDLTDCGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFV
HLSVQEFLAALHVHLTFIKSGSDVMKETQRSKKSSLLNKSDLKSLHQRAVDQALQSPNGH
LDLFLRFLLGLSLQTNQRLLKGLLTKTGSSSQTNRKTVQFIKKNISINVSAEKSINLFHC
LNELNDRSLVEEIQQSLSSGSLSTDKLSPAQWSALGFILVSSGKDLDVFDLRKYSASEEV
LLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSA
GLKSPNCNLETLSLSGCLVSEEGCASLASALTSNPSHLKELDLSYNHPGDSGVKLLSAGL
KDPHWRLEALREEPAGVPFLTPGLRKYSCQLTIDTNTVNRELKLSEDNRKVTYVKELQSY
PDHPDRFDYWPQLLCRTGLTGRCYWEVEWRGDVDISVSYRRIKRKEYSRDCLFGYNDHSW
SLRCSYDGYSVCHNKIKTRLSSSSVSNRVAVYVDCPAGILSFYRVSSDSLILLHTFNTTF
TEPLIPGFGLWSSSGSSSV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacactggaggacaacattgtcacttttctgaagaacgagctgaagaagatccataag
attctgagtccaaatgacccagaatgcacagagaatcagagagatgatgatgaggtgttg
gaaggtcaggatgaagagcagaggagtagcagcagagaggcagtgatgaagatcacactg
aacttcctgaggaggatgacgcaggaggagctggctgaccgtctggagagcaaacgtctt
gcagcagtttgtcaacatcaacttaaatctggtctgaagaagaagttccagtctgtgttt
gaggggattgctaaagcaggaagtccaacccttctgaaccagatctacacagagctctac
atcacagagggagggactggagaggtcaatgatgaacatgaggtcagacagattgaaaca
gcatccaggaaaccagacataccagaaacaacagtcagacaagaagacatctttaaagtc
caacctggaagagaccaaccaatcagaacagtgatgacaaagggagtggctggcattggg
aaaacagtcctaacacaaaagttcactctggactgggctgaagacaaagcccaccagaac
atccagttcatatttccattcacgttcagagagctgaatgtgctgaaagagaaaaagttc
agtttggtggaacttgttcatcacttctttactgaaaccaaagaaatttgcagctttgaa
cacttccaggttctgttcatctttgatggtctggatgagagtcgacttcctctggacttc
cacaacaaggagatcctgactgatgctacagagtccacctcagtggatgttctgctgaca
aaccttatcagagggaaactgcttccttctgctctcctctggataaccacacgacctgca
gcagccaatcagatccctcctcagtgtgttggcatggtaacagaggtcagagggttcaat
gacccacagaaggaggagtacttcaggaagagattcagagataagcagcagggcagcagg
atcatctcccacatgaagacatcacaaagcctccacatcatgtgccacatcccagtcttc
tgctggatcactgctacagttctggaggatgtgttggagaccagagagggaggagagctg
cccagaaccctgactgagatgtacatccacttcctggttgttcagaccaaagtgaagaag
gtcaagtatgatggaggagctgaaacagatccacactggagtccagagagcaggaagatg
attgagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttctat
gaatcagacctgacagattgtggcatcgatatcagagcagcctcagtgtactcaggagtg
ttcacacagatctttaaagaggagagaggtctgtaccaggacaaggtgttctgcttcgtc
catctgagtgttcaggagtttctggctgctcttcatgttcatctgaccttcatcaaatct
ggttctgacgtcatgaaagaaacacaaagatctaagaaatcttcattacttaataaatct
gacctaaaatctctccatcagagagctgttgaccaggccttacagagtccaaatggacac
ctggacttgttcctccgcttcctcctgggactttcactgcagaccaatcagagactccta
aaaggtctgctcacaaagacaggaagtagttcacaaactaatcggaaaacagttcagttc
atcaagaaaaacatcagtataaatgtgtctgcagagaaaagcatcaatctgttccactgt
ctgaatgaactgaatgatcgttctctagtggaggagatccaacagtctctgagttcagga
agtctctccacagataaactgtctcctgctcagtggtcagctctgggtttcatcttagtg
tcatcaggaaaagatctggatgtgtttgacctgaggaaatactctgcttcagaggaggtt
cttctgaggctgctgccagtggttaaagcctccaacaaagctctactgagtggctgtaac
ctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctc
agagaactggacctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgct
ggactgaagagtccaaactgcaacctggaaactctcagcttatcaggctgtttggtctca
gaggaaggctgtgcttctctggcctcagctctgacctccaacccctcccatctgaaagag
ttggacctgagctacaatcatccaggagactcaggagtgaagctgctgtcggctggactg
aaggatccacactggagactggaagctctcagggaggagcctgctggagtcccattcttg
acaccaggtctgaggaagtattcctgtcaactcaccatcgacacaaacacagtgaacaga
gaactcaaactgtctgaagacaacaggaaggtgacatatgtgaaggagcttcagtcatat
cctgatcatccagacagatttgattactggcctcagctgctgtgtagaactggtctgact
ggtcgctgttactgggaggtcgagtggagaggagatgttgatatatcagtgagttacaga
agaatcaagaggaaagaatacagtagagattgtttgtttggatataatgatcattcctgg
agtctgagatgctcttatgatggttactctgtctgtcacaataagataaaaactcgtctc
tcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcattctg
tccttctacagagtttcctctgactcactgatcctcctccacaccttcaacaccacattc
actgaacctctgattcctggatttgggttgtggtccagttctggttcctcttcagtg
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